Osmerus eperlanus (European smelt): 134018909
Help
Entry
134018909 CDS
T10927
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134018909 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134018909 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134018909 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oep00535
]
134018909 (col9a3)
Proteoglycans [BR:
oep00535
]
Extracellular matrix (ECM) proteoglycans
Others
134018909 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134018909
NCBI-ProteinID:
XP_062315247
LinkDB
All DBs
Position
4:13499006..13513488
Genome browser
AA seq
678 aa
AA seq
DB search
MAMFSALGVLLLCQLLTSSSAQRPGPRGPNGLPGTPGPPGKDGTDGKTGPAGLPGKTGPK
GKAGIPGGSGSPGLPGLPGVDGLTGPDGPAGKDGPPGEMGDAGPSGPGGPPGRGRTGAPG
LPGANGLQGGVGPQGPVGPEGTSGDAGAPGLDGPPGLPGALPDGSGDLLCPAICPPGPSG
PPGMPGFKGHTGHKGDKGELGKDGEKGDSGPPGPPGIPGTVGLQGPRGLRGLQGPMGPVG
DRGLPGFRGKPGITGVIGKTGDAGENGPQGFNGPKGDIGKIGPKGGPGGSGPKGEPGIPG
RDGKDGTQGLDGEKGDAGRGGVPGEKGPNGLPGLQGRAGSKGSKGGVGDPGEMGEAGPSG
EPGIPGDIGIPGERGMAGPRGVVGGIGPVGNIGGQGVKGYQGVKGALGDPGLPGPTGIRG
GFGERGPVGASGPKGDMGVGGSDGLPGENGEPGPFGPVGQKGEGGKTGELGPKGVVGPQG
ELGARGAPGKPGLMGFQGEQGLPGIAGKNGVPGKLASEQHIRELCGSMIDDQIAQLAANL
RRPLSPGGVGRPGPAGRAGKPGGSGSIGHPGSRGPPGYRGLPGDLGDPGPRGDVGEQGDK
GPIGKAVDGPVGDQGHQGLPGVHGIVKDGRDGSPGDPGEPGESGRTGRTGHQGSPGICDT
SACQGASVAGKTSNPKNH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctatgttctcagctcttggtgtgcttttgctatgccagcttttgacatcatcttca
gcacagagacctggcccacgaggacccaatgggctgccaggaaccccaggacctccggga
aaggatggcactgatggcaaaactggccctgctggacttcctgggaagactggacctaaa
gggaaagcaggtataccaggaggatctgggagcccaggcctgccaggccttccaggggtg
gacggattgactggtcctgatggcccagctgggaaggatggtcctccaggggagatgggg
gatgctggaccttccgggccaggtggacctcctggcagagggagaacaggagctccaggg
cttccaggagccaacgggctgcagggcggcgtggggccacaggggcctgtgggccctgag
ggtacttctggagatgctggtgctcctggccttgatggacccccaggtcttcctggtgct
ctccctgatggcagtggagatcttttgtgtcctgccatctgtccccctggtccctctggc
cctcctgggatgcctggctttaagggtcacacaggacacaaaggagacaagggagagctt
gggaaagatggagaaaagggtgattctgggccccctggtcctcctgggatcccaggcact
gtggggctgcagggtccacgtgggctgaggggactccagggtccgatggggccagtggga
gacaggggtttacctggtttccggggcaagcctggcattacaggtgttattggaaagaca
ggtgatgctggagagaatggaccacagggttttaatggaccgaagggagacattggcaaa
attggtccaaaaggaggtcctggtggatcaggacccaaaggggagcctggtattcctggc
agagatgggaaggatggcacccaaggattagatggagagaagggtgatgctggtaggggt
ggtgtgcctggcgaaaaaggacccaatgggcttcctggtctgcaaggaagggctggctct
aagggatctaaaggaggagttggagatccaggagaaatgggagaagcaggaccatctgga
gagccaggtattcctggcgacattggtatccctggagaaaggggtatggcaggacccaga
ggagtggttggtggcattggaccagtgggcaacattgggggccagggtgttaaaggttac
cagggggtgaagggtgcgctcggggaccctggccttccaggaccaacggggatccgagga
ggatttggtgaaaggggaccagttggtgcatcagggcctaagggagacatgggcgtggga
ggaagtgatggtctcccaggagagaacggagaacctggtccatttggtccagttggccaa
aagggagaggggggaaagactggtgagctgggacccaagggtgtagtggggcctcaagga
gaactcggggccagaggggccccaggaaaaccaggacttatgggcttccagggtgaacaa
ggtctacccggcattgcagggaaaaatggtgttcctggtaaacttgcaagtgaacagcac
atcagagaattgtgtggctcaatgattgatgatcagattgcacagttggctgccaacttg
aggaggcccctgtccccaggaggggttggtcgtcctgggcctgccggacgcgctgggaaa
ccaggtggttcaggatctattggacaccctggctctcgaggtcctccaggatacagaggg
ctgcctggagaccttggagatcctggtcccagaggtgatgttggtgaacagggagacaag
ggacccattggaaaggctgttgacgggcctgttggagaccaaggacaccaaggtctgcca
ggagtgcatggaatcgtcaaggatgggcgtgatggatcccctggagatccaggtgagcca
ggagagtctggccggacaggtaggaccggacaccagggatctcctggaatctgtgacact
tcagcctgtcaaggtgcctcagttgctggaaaaacctccaaccccaagaaccattaa
DBGET
integrated database retrieval system