Osmerus eperlanus (European smelt): 134018972
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Entry
134018972 CDS
T10927
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134018972 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134018972 (nfascb)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
L1 family
134018972 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
V-set_CD47
Pur_ac_phosph_N
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
134018972
NCBI-ProteinID:
XP_062315373
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All DBs
Position
4:14472455..14485019
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AA seq
1177 aa
AA seq
DB search
MGTLIKPVLLLLLWRSLSAIDVPVEVRQPPTIIKQSLKDHIVDPKDNMVIECEAKGNPQP
IFSWRRNGKYFNVARDQQTSMRRRSGTLDINAWNNPEDYEGEYQCIASNEYGSAYSNKIV
LRLSRAPLWPREVLEPVVVSVGLPLVLSCNPPPGPPKPVTFWMTSCSYARPFTWPVQTPV
PTMQAVRQDRRVSMGVNGDLYFSNVLINDSATDYCCNARFPYKNIIQQKMPVVVKVLTTR
MVAEAGPTLLSPTGTSSTVIVLQGEELLLECVAAGVPTPHIRWTKDGDALSMTNMKVKNF
NKLIQISKASFEDQGEYVCTATNKIGYVKHTITVRVKAAPFWLEKPTDLVLAPEENGEMV
CRADGVPRPTTSWFINGEPIETATPNPSRQLSGDTLIFRSVNVMNTAVYQCNTSNQYGYL
LANAFVNVLHATPRILTPRNELMMVAEGTRTALHCRYFGSPVPDLRWSKYGQGNLEGNRF
KVLNNGTLEIRRTHVEDQGTYLCVVSNLAGREEIQVRLEVKEPTKIVQRPENMRVLRGSD
VRLECKEKHDVSLSITTTWMKNKALLTLSWRVTLDESSLVIAGVNRADEGTYTCIIKTDI
DESSASAQLLVMDRPDPPTNLELSDPYERSVRLSWIPGDSNHSPVKEYLVQYDEDDWLPG
KWRNLSTYPGNLNSVILQLSPFTNYEFRVIAINEIGSSRPSRSSMRFQTSGAPPDAIPKN
IKGVGTWRNNMEISWEPLNSRDWNGPYLKYLVWWRRRDSREEWKNATTKWLRYYIYDTDT
FTPYEIKVQAFNDFGLGPESPVIIGYSGEDRPLAAPLNLRVSNIESDQVEVHWDPVSRNS
IMGEPKEYKVYFWRDSSQLRWLSVSRAMKSKTFPVGDQEYSGILSDLFAYSNYKMYIVVA
NNRYEGPPSNTIQFSTPEGVPSAPTSFRIQQRHLDTIYVDWDLPAEPNGIITGYSLKYQT
LNATRGEPLRTEEFPPNVTSFSVRRYDRYTRYTFSLAAHTQVGIGEWYTEESPHYTTEAY
ARDQVDLSTKGWFIGVMCAVALIVLILLVVCFIKRSRGGKYPVRDKKDVPLETVDDKDQE
GSFDYRSLERIARVSTLPYSRREEERQRGQATVDSMMKHTESDDSLVDYGDGGEIEFNED
GSFIGQYTGSRKDVREEMDYSESLEIHSPMNPIYSLA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggaacactgattaaaccagtccttctactgcttctatggcgaagtctgtctgccatc
gacgtccctgtagaagtccgccagccccccaccatcataaagcagtcattgaaagaccac
attgtggaccccaaagacaatatggtcatagaatgtgaggccaaagggaacccccagccc
attttttcgtggaggcgtaatggtaagtatttcaacgtggcacgggaccagcagacatcg
atgcggagacgctcaggcacactagatatcaatgcttggaacaacccagaggactatgaa
ggggagtaccagtgcatcgcctccaacgagtatggttcagcatattccaacaagatagta
ctgcggctctcaagggctcccctgtggcccagagaggtgctggagcctgtggtggtcagt
gtgggtcttcctctggtgctgtcctgtaatcctccccccgggccacctaaacctgtaacc
ttctggatgaccagctgttcctatgccaggccattcacctggcccgttcagactccagtt
cccacaatgcaggctgtgcggcaggaccgcagggtgtccatgggcgtgaatggagatctc
tacttctccaatgttctcattaacgactcggccaccgactattgctgcaacgctcgtttc
ccctacaaaaacatcatccagcagaagatgcctgtcgtggtcaaagtcctaacaactcgt
atggtggcagaggctggccccaccctgctgtctcccacggggacctccagtaccgtcata
gtcctgcagggggaggagctgctgctggagtgcgttgctgcaggagttcctacccctcac
atcaggtggaccaaagatggagatgcactatccatgactaacatgaaggtgaagaacttc
aacaagctcatccaaatatctaaagcttcatttgaggaccagggtgaatatgtgtgcacg
gccaccaacaagattggatatgtgaaacacaccataactgtccgagttaaagcggctcca
ttctggttggagaagcccactgatctggtgttggctcctgaggagaatggagagatggtg
tgccgagctgatggtgtcccccggcctactacaagctggtttatcaatggagagccaatc
gaaactgccactcccaaccccagcaggcagttatcaggggatacgttgatcttccgctca
gtaaatgtaatgaacactgctgtctaccagtgcaacacctccaaccagtatggctacctg
ctggccaatgcatttgtcaacgtattgcatgccacccctcgtatcctgacacccaggaac
gagctgatgatggtggctgagggcactcgtaccgccctgcactgtcgttattttggctca
cctgtacctgacttgagatggtcaaaatacggtcagggtaacctggagggaaaccgtttc
aaagttctaaacaacgggaccttggagatcagacgcactcatgtggaggaccagggaacg
tacctgtgtgtggtgagcaacctcgcagggagagaggaaatccaggtccgactggaggtc
aaagaacccactaagatcgttcagcggccagagaacatgagagtgttgcgtggcagtgac
gttcggctggaatgcaaggaaaaacatgacgtctctctctccatcaccactacctggatg
aaaaacaaagcgttgctcacactaagctggagagtgacactggatgaatcctcgctggtg
atagcaggcgtgaacagagcagatgagggcacctacacctgcataataaagacagacata
gatgagagctcggcctctgcccagctcttggttatggaccgcccagatccacccaccaac
ctggagttgtctgacccttatgagcgcagtgtgagactgtcctggattcctggagatagc
aatcacagccctgtcaaagagtaccttgttcagtatgatgaagatgattggttgccagga
aagtggagaaacctctcaacctaccctggaaaccttaactctgtcatcctgcagctctca
cctttcaccaactatgaattccgggtcattgcaatcaacgaaatcggctccagtaggccc
agtcgctcttccatgcgtttccagaccagtggtgcacctcctgatgccatccccaagaat
atcaaaggagtgggtacatggagaaacaacatggagatcagttgggagcctttgaacagc
agagactggaacggcccctacctgaaatatctggtttggtggagaaggagagactccaga
gaggagtggaagaatgccacaacaaagtggctgagatactacatatatgacacagacacc
ttcaccccatatgagatcaaggtccaggctttcaatgactttggccttggcccagagtct
ccggttatcattggctactcaggagaagaccgccctctggctgctcccctcaacctgcgt
gtgtccaacatagagagcgaccaagtagaggttcactgggacccagtgtctcgaaactct
atcatgggagaaccaaaggagtacaaggtgtacttctggagagacagtagtcagctacgg
tggctaagtgtcagcagggctatgaagtctaaaaccttcccagtcggtgaccaagaatac
tctgggatcctgtctgacttatttgcctacagcaactataagatgtacatagtggtggcc
aacaaccgctatgaaggcccgcccagcaacactatacagttctccacacctgagggagtt
ccatcagcaccaacgtccttcaggattcagcagagacatctggacaccatatatgtggac
tgggacctgcctgcagagcccaatggcatcatcactggatacagcctcaagtaccagaca
ttgaatgccaccagaggagagcctttgcgcactgaagaattccctccaaacgtgaccagt
ttttcagtgaggcggtacgaccgctacactcgctacactttctccctggcggcccacact
caggtggggataggagaatggtacactgaggaatcacctcattacaccaccgaagcttac
gctcgggaccaggtggacttgtcgactaagggctggtttattggtgtgatgtgtgctgtg
gctttaatcgtactcatcctcctggtggtatgctttatcaagaggagtcgtggaggaaaa
tacccagtacgggacaagaaagatgttccacttgaaacagtggatgacaaagatcaggag
ggatcatttgactatcggtctctggaaaggatagctcgcgtctccacccttccctactct
agacgagaggaagagaggcagaggggccaggcaactgtggactccatgatgaaacacacg
gagagtgacgacagtcttgtggactacggggatggaggggagattgagttcaatgaggat
ggctcctttattggccagtacacaggaagcagaaaggatgtcagggaggaaatggattac
agtgagagcctggagattcactcacctatgaaccccatctactcactggcgtaa
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