Osmerus eperlanus (European smelt): 134018972
Help
Entry
134018972 CDS
T10927
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134018972 (nfascb)
04517 IgSF CAM signaling
134018972 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134018972 (nfascb)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
L1 family
134018972 (nfascb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
C2-set_2
Ig_5
Fn3_ROS1
Pur_ac_phosph_N
V-set_CD47
BiPBP_C
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
134018972
NCBI-ProteinID:
XP_062315373
LinkDB
All DBs
Position
4:14472455..14485019
Genome browser
AA seq
1177 aa
AA seq
DB search
MGTLIKPVLLLLLWRSLSAIDVPVEVRQPPTIIKQSLKDHIVDPKDNMVIECEAKGNPQP
IFSWRRNGKYFNVARDQQTSMRRRSGTLDINAWNNPEDYEGEYQCIASNEYGSAYSNKIV
LRLSRAPLWPREVLEPVVVSVGLPLVLSCNPPPGPPKPVTFWMTSCSYARPFTWPVQTPV
PTMQAVRQDRRVSMGVNGDLYFSNVLINDSATDYCCNARFPYKNIIQQKMPVVVKVLTTR
MVAEAGPTLLSPTGTSSTVIVLQGEELLLECVAAGVPTPHIRWTKDGDALSMTNMKVKNF
NKLIQISKASFEDQGEYVCTATNKIGYVKHTITVRVKAAPFWLEKPTDLVLAPEENGEMV
CRADGVPRPTTSWFINGEPIETATPNPSRQLSGDTLIFRSVNVMNTAVYQCNTSNQYGYL
LANAFVNVLHATPRILTPRNELMMVAEGTRTALHCRYFGSPVPDLRWSKYGQGNLEGNRF
KVLNNGTLEIRRTHVEDQGTYLCVVSNLAGREEIQVRLEVKEPTKIVQRPENMRVLRGSD
VRLECKEKHDVSLSITTTWMKNKALLTLSWRVTLDESSLVIAGVNRADEGTYTCIIKTDI
DESSASAQLLVMDRPDPPTNLELSDPYERSVRLSWIPGDSNHSPVKEYLVQYDEDDWLPG
KWRNLSTYPGNLNSVILQLSPFTNYEFRVIAINEIGSSRPSRSSMRFQTSGAPPDAIPKN
IKGVGTWRNNMEISWEPLNSRDWNGPYLKYLVWWRRRDSREEWKNATTKWLRYYIYDTDT
FTPYEIKVQAFNDFGLGPESPVIIGYSGEDRPLAAPLNLRVSNIESDQVEVHWDPVSRNS
IMGEPKEYKVYFWRDSSQLRWLSVSRAMKSKTFPVGDQEYSGILSDLFAYSNYKMYIVVA
NNRYEGPPSNTIQFSTPEGVPSAPTSFRIQQRHLDTIYVDWDLPAEPNGIITGYSLKYQT
LNATRGEPLRTEEFPPNVTSFSVRRYDRYTRYTFSLAAHTQVGIGEWYTEESPHYTTEAY
ARDQVDLSTKGWFIGVMCAVALIVLILLVVCFIKRSRGGKYPVRDKKDVPLETVDDKDQE
GSFDYRSLERIARVSTLPYSRREEERQRGQATVDSMMKHTESDDSLVDYGDGGEIEFNED
GSFIGQYTGSRKDVREEMDYSESLEIHSPMNPIYSLA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggaacactgattaaaccagtccttctactgcttctatggcgaagtctgtctgccatc
gacgtccctgtagaagtccgccagccccccaccatcataaagcagtcattgaaagaccac
attgtggaccccaaagacaatatggtcatagaatgtgaggccaaagggaacccccagccc
attttttcgtggaggcgtaatggtaagtatttcaacgtggcacgggaccagcagacatcg
atgcggagacgctcaggcacactagatatcaatgcttggaacaacccagaggactatgaa
ggggagtaccagtgcatcgcctccaacgagtatggttcagcatattccaacaagatagta
ctgcggctctcaagggctcccctgtggcccagagaggtgctggagcctgtggtggtcagt
gtgggtcttcctctggtgctgtcctgtaatcctccccccgggccacctaaacctgtaacc
ttctggatgaccagctgttcctatgccaggccattcacctggcccgttcagactccagtt
cccacaatgcaggctgtgcggcaggaccgcagggtgtccatgggcgtgaatggagatctc
tacttctccaatgttctcattaacgactcggccaccgactattgctgcaacgctcgtttc
ccctacaaaaacatcatccagcagaagatgcctgtcgtggtcaaagtcctaacaactcgt
atggtggcagaggctggccccaccctgctgtctcccacggggacctccagtaccgtcata
gtcctgcagggggaggagctgctgctggagtgcgttgctgcaggagttcctacccctcac
atcaggtggaccaaagatggagatgcactatccatgactaacatgaaggtgaagaacttc
aacaagctcatccaaatatctaaagcttcatttgaggaccagggtgaatatgtgtgcacg
gccaccaacaagattggatatgtgaaacacaccataactgtccgagttaaagcggctcca
ttctggttggagaagcccactgatctggtgttggctcctgaggagaatggagagatggtg
tgccgagctgatggtgtcccccggcctactacaagctggtttatcaatggagagccaatc
gaaactgccactcccaaccccagcaggcagttatcaggggatacgttgatcttccgctca
gtaaatgtaatgaacactgctgtctaccagtgcaacacctccaaccagtatggctacctg
ctggccaatgcatttgtcaacgtattgcatgccacccctcgtatcctgacacccaggaac
gagctgatgatggtggctgagggcactcgtaccgccctgcactgtcgttattttggctca
cctgtacctgacttgagatggtcaaaatacggtcagggtaacctggagggaaaccgtttc
aaagttctaaacaacgggaccttggagatcagacgcactcatgtggaggaccagggaacg
tacctgtgtgtggtgagcaacctcgcagggagagaggaaatccaggtccgactggaggtc
aaagaacccactaagatcgttcagcggccagagaacatgagagtgttgcgtggcagtgac
gttcggctggaatgcaaggaaaaacatgacgtctctctctccatcaccactacctggatg
aaaaacaaagcgttgctcacactaagctggagagtgacactggatgaatcctcgctggtg
atagcaggcgtgaacagagcagatgagggcacctacacctgcataataaagacagacata
gatgagagctcggcctctgcccagctcttggttatggaccgcccagatccacccaccaac
ctggagttgtctgacccttatgagcgcagtgtgagactgtcctggattcctggagatagc
aatcacagccctgtcaaagagtaccttgttcagtatgatgaagatgattggttgccagga
aagtggagaaacctctcaacctaccctggaaaccttaactctgtcatcctgcagctctca
cctttcaccaactatgaattccgggtcattgcaatcaacgaaatcggctccagtaggccc
agtcgctcttccatgcgtttccagaccagtggtgcacctcctgatgccatccccaagaat
atcaaaggagtgggtacatggagaaacaacatggagatcagttgggagcctttgaacagc
agagactggaacggcccctacctgaaatatctggtttggtggagaaggagagactccaga
gaggagtggaagaatgccacaacaaagtggctgagatactacatatatgacacagacacc
ttcaccccatatgagatcaaggtccaggctttcaatgactttggccttggcccagagtct
ccggttatcattggctactcaggagaagaccgccctctggctgctcccctcaacctgcgt
gtgtccaacatagagagcgaccaagtagaggttcactgggacccagtgtctcgaaactct
atcatgggagaaccaaaggagtacaaggtgtacttctggagagacagtagtcagctacgg
tggctaagtgtcagcagggctatgaagtctaaaaccttcccagtcggtgaccaagaatac
tctgggatcctgtctgacttatttgcctacagcaactataagatgtacatagtggtggcc
aacaaccgctatgaaggcccgcccagcaacactatacagttctccacacctgagggagtt
ccatcagcaccaacgtccttcaggattcagcagagacatctggacaccatatatgtggac
tgggacctgcctgcagagcccaatggcatcatcactggatacagcctcaagtaccagaca
ttgaatgccaccagaggagagcctttgcgcactgaagaattccctccaaacgtgaccagt
ttttcagtgaggcggtacgaccgctacactcgctacactttctccctggcggcccacact
caggtggggataggagaatggtacactgaggaatcacctcattacaccaccgaagcttac
gctcgggaccaggtggacttgtcgactaagggctggtttattggtgtgatgtgtgctgtg
gctttaatcgtactcatcctcctggtggtatgctttatcaagaggagtcgtggaggaaaa
tacccagtacgggacaagaaagatgttccacttgaaacagtggatgacaaagatcaggag
ggatcatttgactatcggtctctggaaaggatagctcgcgtctccacccttccctactct
agacgagaggaagagaggcagaggggccaggcaactgtggactccatgatgaaacacacg
gagagtgacgacagtcttgtggactacggggatggaggggagattgagttcaatgaggat
ggctcctttattggccagtacacaggaagcagaaaggatgtcagggaggaaatggattac
agtgagagcctggagattcactcacctatgaaccccatctactcactggcgtaa
DBGET
integrated database retrieval system
