Osmerus eperlanus (European smelt): 134018991
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Entry
134018991 CDS
T10927
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134018991 (apex2)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
134018991 (apex2)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
134018991 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
134018991
NCBI-ProteinID:
XP_062315417
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Position
4:14937460..14940156
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AA seq
577 aa
AA seq
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MRIVTWNINGIRTLKGGIKKALDSLDADIVCVQETKVTRDLLDERTAVVEGYNSYFSFSR
GRSGYSGVATYCKDSASPFSAEEGLTGLLNTSHEGTVGSYGNQREFSSEELQLLDNEGRA
VITQHKVMFENQPQTLTVVNVYCPRADPEKPERKQFKLQFYKLLQHRAEAILKAGSHVIV
LGDVNTAHRPVDHCDPDDINDFEGNPGRKWLNGFLLNDGEEDDVEGDDNSCENKTGKFVD
TFRHFHPKRTNAFTCWSTLTGARQTNYGTRIDYIFADSLLVKGQFVAADIMPEMEGSDHC
PVWGHLSCSLLPSSKLPPLCTRHLPEFAGKQQKLSRFLVKVEKQAAKETSRDQAPLPSSQ
EAGETQENLIPQGSGNRCGMKRTPTEESGLSKGKKSKTVKAPLKAPSKPQGSLLAFFKPK
STQVVPPMQASVSQCIKNSEKTEVREGQATGPDGPSVNSMDPEGAQSVCLGKRDPPPFST
PQDTVDRQKQGPDKPLTSASTVEPCVKGAPLGFWKTVLHGPPQPPPCKTHREPCVLRTVK
KAGPNMGRQFFVCARPQGHTSNPEARCNFFAWVDKGK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgttacatggaacataaatggcataaggacgttaaaaggtggaattaaaaag
gctcttgactcattggatgctgacattgtctgtgtccaggaaacaaaagtgacgagagat
ttacttgacgaaaggacagcggttgtagagggctacaactcctatttcagcttcagtcgt
gggcgcagtggttattcaggggttgcaacatattgtaaagacagcgcctcaccattttct
gcagaagaaggtctgacaggcctgttgaacaccagccatgagggtactgttggcagttat
gggaaccagagagagttttccagtgaggaattgcagctgttggacaacgaggggcgggct
gtcattacacagcacaaagtcatgtttgaaaaccagcctcagacacttacagttgtcaat
gtatactgcccacgggcagacccagagaagccagagcggaagcagttcaaactgcagttc
tacaagctgctccagcatcgggcagaggccattctgaaggctggaagccatgtgatcgtg
ttgggggatgtgaatactgctcaccgacctgtcgatcactgtgaccctgatgacatcaat
gattttgaaggtaatccgggtagaaagtggctgaatggcttcctccttaatgatggtgag
gaagatgatgttgagggtgatgacaattcttgcgagaacaaaactggaaagtttgtggat
acgttccgtcatttccatcccaagcgcaccaatgcctttacgtgctggtccactctcact
ggagcacggcagaccaactatggcacacgcattgactacatctttgccgactccctgttg
gtcaagggccagtttgtggctgcagacatcatgccagagatggaggggtcagatcactgc
cctgtgtgggggcacctcagctgctccctcctgccaagctccaagctaccccccctctgt
acccgccacctgcctgagtttgctggcaagcagcagaaactctcccgctttctggtcaaa
gtagaaaagcaggctgccaaggaaacctccagagatcaagccccgctgcccagctctcaa
gaggcaggagagacccaggagaacctgattcctcaaggatctgggaacaggtgtgggatg
aaacggactccgacagaagagtctggactttccaagggaaaaaagagtaagacagtgaag
gctcccttaaaggctccctcaaaacctcagggcagcctgcttgcctttttcaagcccaaa
tccacacaggtggtcccacccatgcaggcctctgtgagccagtgtatcaagaactctgag
aaaactgaggtcagagaaggacaagctacagggccagatggaccctcggtcaacagcatg
gatcctgaaggtgctcaatctgtctgtttgggtaaaagagatccaccccccttcagcacc
ccacaggacactgttgatcgtcagaagcaggggccggataagcccctgacctcagcctca
acagtagaaccatgtgtaaagggggctccactaggcttttggaagacagttctgcatggc
cccccccaacctccaccctgcaagactcacagggaaccctgcgtgctccgcaccgtcaag
aaggcaggaccaaacatgggcaggcagttcttcgtgtgtgcccgccctcagggacacacc
tccaacccagaggctcgctgtaacttctttgcatgggtggacaaaggaaaatag
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