Osmerus eperlanus (European smelt): 134019014
Help
Entry
134019014 CDS
T10927
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oep01001
]
134019014
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134019014
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134019014
Protein kinases [BR:
oep01001
]
Serine/threonine kinases: Other
Other
134019014
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134019014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ARM_PUB
Beta-prop_WDR3_2nd
EIF3I
WD40
WDR55
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_Gbeta
LisH
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
134019014
NCBI-ProteinID:
XP_062315461
LinkDB
All DBs
Position
4:complement(15529499..15541224)
Genome browser
AA seq
1553 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEREQQGSTQDLVNILTKISELVERETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNALVNSYVMTSREFSLNTSACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQRL
RELQDKDAVNRREFKRPSPRKALGEPLLPLDEETVDGGFEDGPFTLGRNGPERDEKGPDE
VRSENVFTAREPANDLSFHLASLHKTSSRANSTVKTMMKPVSAPNSLMHCDVSDGRAEGS
SHLKRRAERENGRKAKQKLNFSLPEPERNFNELSNSSWSEMSPWVIGNNYHLYPLTPEIE
QRLILQYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKK
FAAEFVAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSVLSDVVGYTL
WLLECSHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLS
DDAIFSSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKACSYTHE
QVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDI
LSILTVVPKTQLLMAESVSVLSDEGGATTSIVGMSIVLLVAEGEVFVNDAEIQKSALQVV
TNCVCAPDKRMSSIGKFISGTPRRRLPQQTKTSESVLTKMWNVVQSNNGIKVLLSLLTVK
MPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKF
CKFAAELIERVSGKPLLIGTDVSLAWLQRANVVAQSRISFPEKELLLLIRNHLVAKGLND
TATILTKEADLPMALLSHPSSSTFPPVTVPPPPVSPATALPRTPRLANGVAARLASLASH
SSSPLSVHPQPRPSTSQALVAPPLCPSTSGPHQSNGSPLIGRIVFTRERPSPCGVVSCKK
PRVLRQKSDHGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCKNPVTTCPPFSL
FTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHLIFSRFRPISVFREADE
DESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLL
TSASWSFPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGLKT
LTLNNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGL
EVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKTPFG
SSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRL
AEEEEDEEDQEDDDQEEDDDDDEDDSDEDLDTDPLIAELENDNGGEEDEEDGNDDFSPSD
DEEVARLLEEDDEDEDDEDDSDDNEEDVDLAADNTDSSDNSYLEDDIILSLNE
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcatctgccagtgtggattccaaggcagagctgactgctttgctggaacag
tgggagagggagcaacagggcagcacacaagacctggtcaatatcctcaccaaaatctca
gaattggtggaaagggaaacggaggaataccataaagctgatccggatccttttgatgac
aggcatcctgggagagctgatccagagtgtgttttgggacaccttctcaagatccttttc
aagaatgatgatttcatgaatgcactggtgaacagctatgtgatgacgagcagagagttc
tctctcaacacgtccgcctgtcgcctgctgcagaacatcatgcccggccttgagacagct
gtggtttttcaggaaaaggagggcatcgttgagaggctgtttaagtgggcccaggaggct
gaacagcccctaaggatctatgccacaggccttttagcaggagccatggagaaccaggac
atcgctgccaactacagggaggagaactctgttctggtgcctctgatgttgcagcgccta
cgtgagcttcaggacaaggatgctgtgaacagaagggagtttaagaggcccagcccccgg
aaggccttgggtgagccattgcttcctctggacgaggagaccgttgacggtggttttgag
gacggccccttcaccctgggcaggaacgggcccgaaagggacgagaagggaccagacgag
gtcagatcggaaaatgtgttcaccgcccgcgagcctgcgaatgacctgtctttccacctt
gcctctcttcacaagaccagcagccgtgccaactccacagttaaaaccatgatgaagccc
gtctctgctcctaactccctgatgcactgtgacgtctctgacggaagggcagaggggagc
agtcacctgaagaggagggcagagagggagaacgggcgcaaggccaaacagaagctgaac
ttctcactgcctgagcccgaaagaaactttaacgagctgtccaatagcagctggtctgaa
atgagtccatgggtgattgggaacaactatcacctttaccctctgaccccagagatagag
cagaggctcatcctgcagtacctgactcccctgggggagtaccaggagctcctggctgtg
ttcatgcagatgggggctcgagagctgctcatgcactacatggacctaaagcagaccaat
gacgtacagctcaccttcgaggctctcaagtacctggcctctctgctcctgcacaagaag
tttgcagcagagtttgtagctcatgggggggttcagaagctgctggagatacccagacca
tccatggctgccacgggggtgtctctctgtctctactacctggcctacaaccaggatgct
atggagcgggtgtgcatgcttccccattcggtgctgtctgatgtggtgggctacaccctg
tggctgctggagtgttctcacgcgtcaggctgctgccacgccaccatgttcttctccatc
tccttctccttccgagccgtgctggagctcttcgacaggcaggacggcctccgtcgcctc
gtcaacctgatcagcacgttagagatcctgaaccctgaggaccagggggctctgctgagc
gatgatgccatcttctccagcaggcagactgccaaacacacctgcatggccctgcggagg
tacttcgaagcccacctggctatcaaagtggagcaggtcaagcagtccctgcagcggact
gaagggggcgctcccatccactcccagccttactacaaggcgtgcagctacacccacgag
caggtggtggagatgatggagttcctgattgagtacggcccagtgcggctgtactgggag
ccagcagaggtcttccacaagctgtcctgtgtgcagctcctgctgcaactcatctccatc
gcctgtgactggaggacctactacggcaggagtgatacagtgcgctacgccctggacatc
ctgagcatcctgactgtggtgcctaagacccagctgctgatggctgagtctgtgtcggtg
ctctccgacgaggggggcgccacaacctccatcgtggggatgagcatagtgctgttggtg
gcggagggggaggtgttcgtgaacgacgctgagatccagaagtcggccctgcaggtggtc
accaactgtgtgtgcgcccctgacaagcgcatgtccagcatcggcaagttcatctcgggc
acgcctcgccgccgcctgccccagcagaccaagaccagcgagagcgtgctcaccaagatg
tggaacgtggtccagtccaacaacggcatcaaggtgctgctgtccctgctgacggtgaag
atgcccatcacagacgcagaccagatccgggccctggcctgcaaggcgctggtgggcctg
tctcgctccagctccgtcaggcagatcatcagcaagctgcccctgttcagcagcggacac
atccagcagctgatgaaggagcccgtgctgcaggacaaacgcagcgagcacgtcaagttc
tgcaagtttgccgccgagctcatcgagcgggtgtctgggaagcccctgctgatcggcacg
gacgtgtctctggcctggctgcaaagggccaacgtggtagcccagtcgaggatatccttc
cctgagaaggagctgctccttttgatcaggaaccacctagtggccaaaggcctgaacgac
acggccaccatcctgaccaaagaggccgacctccccatggctcttctgtcccacccttcc
tccagcaccttcccccccgtcactgtccctcctccccctgtttcccccgccaccgccctt
ccccgcaccccgcggctggccaatggggttgcggcacgcctcgcgagcctcgcctcccat
tcgtcaagcccactgtcggtccacccccagccccgcccatctacatcacaagccctcgtc
gctcctcccttgtgtccctccacgtccggccctcaccagagcaacggctcgcccctcatc
gggcggatcgtgttcacgcgggagcgcccgtcgccgtgcggcgtggtgagctgcaagaag
cctcgggtgctgaggcagaagtccgaccacggggccttcagccagagccccgccatgaag
aagcagctggaccgacacctgccctccccccccgccctggacagcatcatcaccgagtac
ctgagggagcagcacgcgcgctgcaagaacccggtgaccacctgcccccccttctccctc
ttcaccccgcaccagtgccccgagcccaagcagaggcggcaggcgcccaccaacttcacc
tcccggaacacgcgcagggttgtttaccccaaatacggaggggtggacgggggctgcttc
gacagacacctcatcttcagcaggttccggcccatctcggtgttcagggaggcggatgag
gacgagagtggcttcatgtgttgtgccttctcagcccgcgagcgcttcctgatgctgggc
acgtgcacgggccagctcaagctctacaacgtgttcacggggcaggaggaggccagctac
agctgccacagctcggccatcactcacctggagccgtcccgggacggctctctgctgctg
acgtcggcgtcgtggagtttccctctgtctgcgctgtggggcatgaagtcagtgttcatc
atgaagcattccttcctagatgaccattacgtggagtttagtaaactttcgcaggacaga
gtcatcggcacaaaggaacacatcgctcacatctacgacatccagacaggcctgaagacg
ctgaccctgaacaaccctgacctggccaacaactacaagaggaactgcgccaccttcaac
cccacagacgacctggtgctgaacgacggcgtgctgtgggacgtgcgctcggcccaggcc
atccacaagtttgacaagttcaacatgaacatcagcggggtgtttcaccccaacggcctg
gaggtcatcgtcaacacggagatttgggacttgcggaccttccacctcctccacactgtc
ccagcgctggaccagtgcaggatcgtctttaacaacaacggcactgtgatctatggagcc
atgttacaggccgacgatgaggatgacatgatggagatgcagatgaagactccctttggc
tcctctttccggaccttcaacgccacagactacaaacccatcgccaccatcgacgtgaag
aggaatatatttgacctgtgcacagacacgaaagactgttacctggctgtgattgagaac
caggactcggtcaacacagacactgtgtgcaggctgtacgaggtgggccgccagagactg
gcggaggaggaagaggatgaggaagatcaggaggacgacgaccaggaggaggacgacgat
gacgacgaggacgactctgacgaggacctggacacggaccccctgatcgcagagctggag
aacgacaacgggggcgaggaggacgaggaggacggcaacgacgacttctccccctccgac
gacgaggaggtggctcgtctactggaggaggacgacgaggacgaggacgacgaggatgac
tcggacgataacgaggaagatgtggacctcgcagcggacaacacagacagctctgacaac
tcataccttgaggatgacatcatcctatccctgaatgagtga
DBGET
integrated database retrieval system
