Osmerus eperlanus (European smelt): 134019034
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Entry
134019034 CDS
T10927
Symbol
sema3gb
Name
(RefSeq) LOW QUALITY PROTEIN: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb
KO
K06840
semaphorin 3
Organism
oep Osmerus eperlanus (European smelt)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
Ig_2
ig
PSI
I-set
PRIMA1
Motif
Other DBs
NCBI-GeneID:
134019034
NCBI-ProteinID:
XP_062315507
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Position
4:15902909..15927879
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AA seq
754 aa
AA seq
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METTQTLLLFFLGCCVFSCHANTRSAPRVHLSYKELMETRTARPFSFSFNTSDYRILHMD
QDQGRLYLGSREYLVALDMQNINKEPLIIHWPATTQRKGECKMTGKGGQGECANFVRLIE
PWNRTHLYTCGTGAYKPICTFINRGWRAEEYLFRLVPGYVDSGKGKCSYDPRQANAAALI
NGNLYAGVHVDFMGTDPAIFRTLGDRPAVRTEQYDSRWLNEPVFVKIQQIPDSSEKNDDK
LYFFFREKSLDAAGGSIPSVLSRVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGSDGV
ETYFDELRDVFIQPTQDKRNPVVYAIFSTAGSVFKGSAVCVYSMSDIRNVFNGPFSHKHG
HNYQWTPYTGKIPYPRPGTCPGGTFTPGLRSTKELSDDAVNFVRAHPLMYHSVYPIHKRP
LVVRTGVDYRFTSIVVDLVDAVDGRYEVLFLGTDRGTVQKVIVLPKDTSTTEELTLEEVE
VFRQVPAAIKTMKISSKRQQLYVSSEKGLTQVSLHRCEVYGKACSDCCLARDPYCAWDGE
TCAPFTPSTKRRSRRQDIKHGDPLRQCRGFNAKVEKRLSETVQFGVEGSSTFLECQPRSP
QATVKWLYQKDGRRKLLNRDREVLKTGHGILLKSLSHADSGLYHCLATENNFKHTVARVA
LRILDREIVEALTSPDAPPFEESPNPHQHRHHPPPPPPPPSHTPPTVLXSQPEIRLINQY
CQSYWLQLNPKLPTKRTSRRHAEGHSEHETPGGA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacccaaaccctcctcctctttttcttgggttgttgtgtcttcagttgccat
gccaacactcgctctgccccgagagtccatctgtcttacaaagagctgatggagacacgg
acggcacgtcccttctccttctccttcaacaccagcgactacaggatcctgcacatggac
caggaccaaggccgtctctacctgggcagccgggagtacctggtggctctggacatgcag
aacatcaacaaggagcctcttataatccactggccagccaccacccagaggaaaggagaa
tgcaaaatgactggaaagggtgggcagggagagtgtgcaaactttgtgcgtcttatcgaa
ccctggaaccgcactcacttgtatacctgcggcactggagcctacaaacccatctgcacc
ttcattaacagaggatggagagctgaggagtacctcttcagactggtgccaggatatgtg
gactcaggaaaaggcaaatgctcatatgaccctcgccaggccaatgctgctgctcttatc
aatgggaacctgtatgcaggggtccatgttgatttcatgggcacagaccctgccatcttc
agaaccctgggagatcgaccagctgtcaggactgagcaatatgattccagatggctgaat
gaaccagtttttgtgaagatccagcagatcccagacagttcagagaagaacgatgacaag
ctctacttcttcttcagggagaagagcctggatgcagctggtggcagcatccccagtgtg
ctgtccagggtgggccgggtctgcctgaatgatgatgggggtcaaaggtcattggtgaat
aagtggaccaccttcctgaaggctcggttggtgtgctcagtgattggtagtgatggtgtg
gagacgtatttcgacgagctgagggacgtattcattcagccaactcaggacaagcgcaat
cctgttgtgtatgctatcttttccaccgcggggtcagtgttcaagggctctgctgtttgt
gtctactctatgtctgacatccgcaacgtgttcaatggccccttctcccacaagcatggc
cacaactaccagtggaccccttacactggcaagatcccttaccctcgacctggaacgtgt
ccagggggaacatttactcctggtcttcgctccaccaaagagctctctgacgacgcagtg
aactttgtgcgggcccaccccctcatgtaccactctgtctaccccattcacaagcgcccc
ctggtggtccgcacaggggtggactaccgctttacatccatagtggtcgacctggtggac
gctgtggatgggagatatgaggtgctgttccttggaacagatcgcggaactgtccaaaaa
gtgatagtacttcctaaagacaccagcaccacagaagagctgactttagaggaagtggag
gtgttccggcaggtcccagctgctatcaaaactatgaagatatcatccaaaaggcaacag
ctgtatgtgtcatcagagaagggtcttacccaggtgtccctgcacagatgtgaggtctat
gggaaagcctgttctgactgttgtctggccagggacccctactgtgcctgggatggggag
acctgtgccccctttactccctccaccaagaggcggagcagaagacaagacatcaaacat
ggagatcccttgagacagtgtcgagggttcaatgcaaaagtagagaagcgtctgagtgaa
acagtgcagtttggggtggaagggagcagcacgttcctcgagtgccaacccagatctcca
caagctacagtcaaatggctctaccagaaagatggcagaaggaaattgctgaaccgagat
cgtgaagtgctgaaaacaggccacgggattctgctgaagtctctaagtcacgcggacagt
gggctgtaccactgcctggccacagaaaacaactttaaacacaccgtggcccgagtggcg
ctccgcatcctggacagggagatagtagaggccctcacttcccctgatgctccccctttc
gaggaatcaccaaatcctcaccagcatcggcaccatccccctcctcccccaccccccccc
tcacatactccccccacagttctcnngtcccagccagagatccgcctcatcaaccagtac
tgccagtcttattggctgcagctcaatcccaaacttcccaccaagcgcaccagccgcagg
cacgctgagggtcattctgagcacgagactcccggtggggcctag
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