Osmerus eperlanus (European smelt): 134019179
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Entry
134019179 CDS
T10927
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03083
Polycomb repressive complex
oep04980
Cobalamin transport and metabolism
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134019179 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
134019179 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134019179 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134019179 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134019179 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134019179 (hcfc1b)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134019179 (hcfc1b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
134019179 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
134019179 (hcfc1b)
MLL-HCF complex
134019179 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134019179 (hcfc1b)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
134019179 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Linocin_M18
Motif
Other DBs
NCBI-GeneID:
134019179
NCBI-ProteinID:
XP_062315772
LinkDB
All DBs
Position
4:complement(17865867..17881559)
Genome browser
AA seq
1789 aa
AA seq
DB search
MASGTSSSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKA
KGPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSKKSRIIIYGGMSGCRLGDLWVFDIDTLTWNKP
AINGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMT
WETVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPH
PPARVQLVRANTNSLEVSWGAVQTADTYLLQLQKYDIPATSAAASTPAGSAAATSLPSIT
PKSPAPAAASVASQGLPLQGITLVPSPTTSVPGSPLGARGPAILKVAAPHSTTGTSIVTV
RQANQAGKSPVTLTSLPAGVRMVVPAQGVQGTPIGSSPQMSGMAALAAAAAATQKIPPST
ATMINVPPGATIVKTLAVSPGSTTMPVKVGSPIMVSNPATRMLKTAAAQVGTSCITTPNT
PTRPIITVHKSGTVTVAQQTQVVTTMVGGVTKTITLVKSPLTMGGSGTLFSNLGNLGKVM
SVVQTKPGQAGSMTGQAGTQIIQTKGPLPAGTILKLVTSADGKPTTIITSSQAGGTGTKP
TILGISGMSPTSTSKPGTTIIKTIPMSALQQGATGRALYGVTSSAGMKSPITILTTKMMT
PGTGKFITTVPKLGTGVGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVSSVKPT
VTTLVVKGTTGMTTLGTVTGTVSTTLAGGGVANATLATPITTLSSQVVSSASSSSPTQVT
LITTPSGVEAQPVQDLPVSIMASPTSDQPSASSGSGAEASAGDTPGTVTLVCSNPPCETH
ETGTTNTATVASSTMGGVEQRVCSNPPCETHETGTTNTATVASSGMGRGTQQACTNPPSE
THDTGTTNTATTASCNMGSNQTGVPTSSGSDSPSSPSGSSDPLSPSAVSGASSAPGVLRP
ETLRTGTTYTHTTARSNMGSNQTGTVQSSSKEKSGQGSGVTSPVCSNPPCETHVTSTTNT
TTTSGAGSIQQTCSNPPCETHETGTTSTPTQASSSMGAEGQAEVAQRVCSNPPCETHETG
TTNTPSTASSNLAGTVQRVCSNPPCETHETGTTNTATTATAQPGGEGAQDDNGTTDAPSS
STESSAVTTTQSRAVTTVTQATPTPGPSVPEISSMCGEDQKADSSEAVAAATGEGEEPMQ
TDDSAAAGSILQVHMETQPSQPDQTQMEQGGGAEPMSLPQELMSSEGATGTTLMVTGLTP
EELAVTAAAEEAAQAAASEEAQALAIQAVLQAAQQAVMNEGEASSETQQPTTIPIVLTQQ
ELAALVQQQQQLQEAQAQAQALAQQEAAAQGQAAASLPTEGLAPADSLNDPTSESNGHEM
ASAVTSAVARLASTFATPQTLGSAGPAKMQAAATMADVANGIESATGKQGAPPSIVPKPA
VKKDNQWYDVGIVKVTNMVVTHFYVPADDSVSDDDSGAMPDYTQMRKMELQPGTAYKFRV
AGINNCGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVY
LAIQSSQTTQESKPSTPAQLAFMRVFCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAAR
NEKGYGPATQVRWLQETSKDGSAAKPAAKRPGTSPDTKATGPKKARADQ
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggacctcaagctcagttctgcagccacggtggaagcgggtgttgggatgg
tccggcccggtaccccggccccgccacggccaccgtgcggtcgcaattaaggaattgatg
gttgtattcgggggaggcaatgaaggaattgtggacgaactacacgtttacaatacagcg
accaaccagtggtttattcctgctgtccgcggagacatcccccccggctgtgctgcatat
gggttcgtgtgtgatggtaccagactactcgtctttggaggaatggttgaatatggaaaa
tacagcaatgatctgtatgaactgcaggcaagccgatgggaatggaaacgactgaaggca
aaagggccaaagaacgggccgcccccctgtccccgactgggacacagcttctccctggtg
ggaaacaaatgctacctttttggaggactggccaatgacagtgaagatcccaagaacaac
ataccaagatacctgaatgacctgtataccttggagctgcgagcaggctccagtgtggtg
ggctgggacatccccatcacctacggcgtgctgccccctcccagggagagccacacagct
gtggtctacactgagaagaccagcaagaagtcacgtatcatcatctatgggggcatgagt
ggctgtcgtctcggggacctctgggtctttgacatagacactctaacatggaacaagcca
gctatcaatggtacagctccccttccccgcagtctccactctgccaccaccatcaccaac
aaaatgtttgtgtttggaggctgggtgccactagtgatggacgatgtgaaagtagccaca
catgagaaggagtggaagtgcacaaacacactggcctgcctcaacctggacactatgacg
tgggagacggtgttgatggatagcctggaggacaacattcccagagccagggcaggacac
tgcagcgtggccatcaactcccgcctctatgtctggagtggcagagatggctaccgcaag
gcctggaacaaccaggtgtgctgcaaggatctgtggtacctggagacagagcggccccac
ccccctgcacgtgtgcagctggtgcgagccaataccaactctctggaggtgagctggggt
gcggtccagaccgcagacacctacctgctccagctgcagaagtacgacatccctgccacc
tctgctgctgcctccactcctgcaggaagtgcagcagccacctcactaccctccatcacc
cccaagagccccgccccggccgcagcctctgtggcaagccaaggtctgcccctccagggc
atcaccctggtcccctcgcccaccacctctgtaccgggaagtcccctgggagcccgcggg
ccagctattctaaaggtggccgccccccactcgaccacaggaacatccattgtcactgtg
agacaagccaatcaggcaggcaaatccccagtcaccctgacatcacttcctgctggcgtc
cgcatggtggtaccagcccagggagtccaaggaacgccaattggcagcagccctcagatg
agtggcatggctgccctggctgccgccgctgcagccactcagaagatcccaccctccaca
gcaacaatgatcaatgtcccaccaggcgccaccatcgtcaagacgttggcggttagtccc
ggttccaccaccatgcctgtcaaagtgggctcgcctattatggtgagcaaccctgccacc
cgcatgctgaagactgccgcagcgcaggtgggcacgtcctgcatcaccacgcccaacacc
cccactcggcctatcatcacagtgcacaagtccggcactgtaacggtggcccagcagacg
caagtggtcactacgatggtgggaggagtaaccaagaccatcaccttggtcaagagcccc
ctcaccatgggtggcagtggcacactgttctctaacctggggaaccttggcaaagtgatg
tcggtggtgcaaaccaaaccaggtcaggcaggatccatgactgggcaggcaggcacccag
atcatacagactaaaggtcctctccctgcgggcaccatcctgaagcttgtgacgtctgcc
gacggtaaacccaccaccatcatcacgagcagtcaggccgggggcaccggcaccaagccc
accatcctgggcatcagtggcatgtcccctacctccacctccaagcctggcaccaccatc
attaagaccatccccatgtctgccctccagcagggagccacaggtagagctctatacggt
gtgacgagcagtgcaggaatgaagagtcctatcaccatcctcaccaccaagatgatgacc
ccgggcactggcaagttcatcaccaccgtgcccaagctggggactggagttggccagcag
ggcctaacacaggtggtgttgaagggagcccctggtcaaccaggcaccatcctcaggaca
gttcccatgggcggagttcgtcttgtctcccccgggaccgtgtcctcggtcaaacccaca
gttaccacccttgttgtcaagggaaccacaggaatgacgactcttggcacggtcactggc
accgtctccacaaccctggcaggaggaggtgtggctaatgccactctggccacgcccatt
accaccctgtccagccaggtggttagctctgcctccagctcctcgcccacacaggtgacc
ctgatcacgacgcccagtggagtggaggcccagcctgtccaggacctgcctgtctccatc
atggcctcgcccacctctgaccagcccagtgccagctctgggtctggggccgaggcgtcg
gctggagacacccctggaaccgtcaccctggtctgttccaacccgccctgcgaaacccac
gagaccggaaccaccaacacggcaaccgtggcctcttcaaccatgggtggcgtagagcag
cgagtgtgctctaaccccccttgtgaaacccatgagaccggaaccaccaacacggcaaca
gtagcttcgtctggtatgggcagggggacgcaacaggcctgcaccaaccccccctctgag
actcacgatacgggaaccaccaacaccgccaccaccgccagctgtaacatgggctccaac
cagacgggggtccccacctcaagcggctccgattcaccatcctccccttcgggctcgtcg
gacccgctttccccctcagcagtgtcgggcgctagctcggccccaggggttctccggcca
gagactctccgcacagggaccacctacacccataccacggcccgctccaacatgggctcc
aaccagactggtacggttcagagctcgtcgaaggaaaagtcgggtcaagggagcggggtc
acctcccctgtctgctccaacccgccctgtgaaacccacgtgaccagcaccaccaacacc
accaccacaagcggagccggcagcatccaacagacctgttccaacccgccgtgcgaaacc
cacgagacgggtacgaccagcaccccgacccaggcctcctccagcatgggagcagaaggc
caggctgaggtagcccagagggtgtgctctaaccccccttgtgagacccatgagaccggc
accaccaacaccccctccacggcctcctccaacctggcgggcactgtccagagggtgtgc
tccaaccctccctgtgaaacccatgagactgggaccactaacacagccaccactgccaca
gcccagccaggcggcgagggagcgcaggatgacaacggcaccacagacgccccctcctcg
tctacagagtccagcgcagtcaccaccacccagagccgtgccgtcaccacagttacccag
gccacgcccaccccaggaccctccgtaccggagatctcgtccatgtgtggcgaggaccag
aaggccgactcgtctgaggcggtggccgcggcgacaggggaaggggaggagcccatgcag
acagatgactctgctgccgcaggctccatcctgcaggtgcacatggagacgcagcccagc
cagcctgaccagacccagatggagcaggggggcggggcggagcctatgagcttgccccag
gagctgatgtcatcagagggcgccacaggtacgaccctcatggtgacggggctgaccccg
gaggagctggcggtgacggccgcggcggaggaggcagcccaggcagcagcctcagaggag
gcccaggccctggccatccaggctgtcctgcaggccgcgcagcaggctgtcatgaatgaa
ggtgaggccagctcagagacccagcagcccaccaccatccccatcgtgctgacccagcag
gagctggcagccctggtgcagcagcagcagcagctccaggaagcccaggcccaggctcag
gctctggcccagcaggaggccgccgcccagggccaggcggctgcctccctccctaccgag
ggcctggctccagccgacagcctcaatgaccccacctcggagagcaacggtcatgagatg
gcgtctgccgtgacgagtgcggttgccaggttggccagcacctttgccacaccacagacg
ctgggctctgccggtcctgccaaaatgcaggcagctgccactatggctgacgtggccaac
ggcattgagtctgcaacagggaagcagggagcccctccctccattgtcccaaagcctgct
gtcaagaaagacaaccagtggtatgatgtgggcatcgtcaaggtgaccaacatggtggtc
acgcacttctatgtccctgcagatgactctgtctctgatgatgactccggggcgatgcca
gactacacccagatgaggaagatggagctgcagccgggcacggcctacaagttccgtgtg
gcgggcatcaacaactgcgggcggggcaccttctccgaggtctccgccttcaagacctgc
cttccgggcttcccaggagcaccctgcgccatcaagatcagcaagagcccagatggggcc
cacttgacctgggagcctccctcagtaacgtctggtaagatcatcgagtactccgtctac
ctggccatccagagcagccaaaccacccaggagtccaagccctccaccccagcccagctg
gccttcatgagggtcttctgtgggcctagcccctcctgcctggtgcagtcctccagcctg
tccaatgcacacatagactacaccaccaagcctgccatcatcttccgcatcgcagcccgc
aacgagaagggctatggcccagccacgcaagtcaggtggctccaagaaaccagtaaagat
ggctctgcagctaaaccagctgccaagagaccaggcacctcccctgacacgaaagctact
ggtccaaagaaggccagggccgaccagtaa
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integrated database retrieval system
