Osmerus eperlanus (European smelt): 134019263
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Entry
134019263 CDS
T10927
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
134019263 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
134019263
NCBI-ProteinID:
XP_062315944
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Position
4:18858238..18872320
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AA seq
821 aa
AA seq
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MMGIFVHCVLLLLFNVSFGLDISRRTAYNGQTVFTKSPSLDKGSYIEKRSVPAWLAPAKH
MRSRRSTDQGNTCKALQGYDTKLSENTHSYTFNDLSGSVSLAWVGDGTGVILVLTTFQVP
FFLLRFGQSKLYRSGNYGKSFQDVTSLINNTFIRTELGIAIGPENSGKVILTGQVSGGKG
SRIFVSKDFGKSFSHLDLPFTPLMQITYNPHDSNVLMAISSVNELWLSEDFGENWKKLHG
MVCLVKWGMDNAIFFTTNLNGSCNDRGMLDLRKTSDYGKNIKTVASKIFSFGLGGRFLFA
SVMTGKETLRMIHVSVDQGEVWNMAQLPAVGHEQFYSILAANDDMVFMHVDDPGDTGIGT
IYVSDDRGTVYSKSLERHLYTTTGGDTDFVNVTSLRGVFITSVLAEDNSAQTVVSFDQGG
EWLPVQKPANSICDSTAKDPEKCSLHIHAAYSTGTGLNIPMLPLTEPNAVGLILAHGSVG
DALSVLVPDVYVSDDGGYSWLKALRGPHHYAILDSGGLLVAVEHSNTEPVHQIKFSTDEG
QCWRVYNFTDEPIHFTGLASEPGARSMNVSVWGYRDTIISQYWISFTIDFRELLTRDCGD
NDYVQWLAHSDDISDPNDGCMLGYKERFLRLRKDSVCWNGRDYMVNKEPTPCPCTLDDFL
CDFGYYRKENSSVCVEQPDLKGQVLEFCLQGREEQLQTSGYRKIPGDKCQGGNMPERKEI
DLSQRCVSDLLGPQLLTKVHTSSSVPIVVTVIIIMLLGTVAGVFFVKKYVCGGRFLVHRY
SVLQQHAEANGIEGEDEPLETTHTPNGKIEFHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaatctttgtgcactgtgttttacttcttctgtttaatgtgtcgtttggttta
gacatttcacggagaaccgcatacaatgggcaaacagtttttacaaagagtcctagtcta
gataaagggtcatatattgaaaagagatcggttcctgcctggcttgccccagcaaagcac
atgagaagtagaagaagcacagaccaaggaaacacctgtaaagctcttcaaggatacgac
accaagttgtctgaaaatacccacagctacaccttcaatgacctgagtggctctgtgtcg
ctggcctgggtgggagatggtacaggggtcatcttggttttgacaacatttcaggtgcca
ttcttcttgttaagatttggccagtctaaactttatcgaagtgggaactatgggaagtcg
ttccaggatgtcaccagcctcatcaacaacaccttcatccgcactgagttaggaattgcc
attggtccggagaactctgggaaggttatcctaacaggccaggtgtctggaggcaagggc
tcacgtatctttgtctccaaggactttgggaagagtttcagccaccttgaccttcccttc
acccccctgatgcagatcacctacaacccccacgattccaatgtccttatggccatcagc
agtgttaatgagctgtggctatcagaggactttggggagaactggaaaaagctccatggc
atggtgtgtctggtgaaatgggggatggacaacgcaattttctttacaaccaacttgaat
ggatcttgcaatgacagggggatgctagatttgaggaagacatcagactatgggaaaaac
atcaagacagttgccagtaagatcttctcttttggccttggtggacgttttctcttcgcc
tcagtaatgaccggcaaggaaacattgaggatgatccatgtgtcagtggaccagggggaa
gtgtggaatatggcccagctgcccgccgttggtcacgagcagttctactccatcctggca
gcgaatgatgacatggtgttcatgcatgtggatgatccaggggacacaggaattggaacc
atctacgtgtctgacgatcgtggcacggtttactccaagtctctggaacgacatctctat
accaccacagggggtgacacagactttgtaaatgtcacctcccttcgtggggtcttcatc
accagtgtccttgctgaggataactcggctcagacagtagtgtcctttgaccagggaggg
gagtggctacccgtacagaaaccagccaacagtatatgtgactccacagccaaagaccca
gagaagtgcagtctccacatccatgctgcttacagcacaggaacggggctgaacatccca
atgcttcctctgacggagcccaatgctgtgggcctcatcctagctcacggaagcgtaggc
gacgccctctctgtgctggttccagacgtgtacgtgtctgacgatgggggctactcctgg
ctgaaggccctgaggggcccccaccattacgccatcttggactcggggggtctgttggtg
gctgtggagcacagcaacactgagcctgtccaccagatcaagttttctacggacgagggc
cagtgctggcgagtgtataacttcaccgacgagcccatccacttcacaggcctggcctcg
gagcctggcgcacgctccatgaacgtcagcgtctggggctacagggacaccatcatcagc
cagtactggatctctttcaccatcgacttcagggagctgcttaccagggactgcggggac
aatgactacgtacagtggctggcacactctgatgacatcagcgaccctaacgacggatgc
atgctcggttacaaggagcgcttcttgcgtttgaggaaggactctgtgtgctggaacgga
cgagactacatggtcaataaggagcccaccccctgcccctgcactctggacgacttcctt
tgtgactttgggtactaccgcaaagagaacagctccgtgtgtgtggagcagccggacctg
aagggccaggtcctggagttctgcctgcaaggcagggaggagcagctgcagaccagcggt
tataggaaaatcccaggggacaagtgtcagggaggaaatatgcctgagcgcaaggagatt
gacctgagccagaggtgtgtcagcgacctgctcggtccacaactcctgacaaaggtccat
acctccagctctgtgcctatcgtggtgacggtcattatcatcatgctgctcggtactgta
gcaggggtcttcttcgtcaagaagtatgtctgtggtggacggttcctggttcacaggtac
tcagtgctgcagcaacacgccgaggctaacggcattgagggagaggacgaaccactggaa
accacccacactcccaacggcaagatagaattccatgacgactcagatgaggaccttcta
gaatag
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