Osmerus eperlanus (European smelt): 134019353
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Entry
134019353 CDS
T10927
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134019353 (ddx27)
03009 Ribosome biogenesis [BR:
oep03009
]
134019353 (ddx27)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134019353 (ddx27)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134019353 (ddx27)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-60S particles
Helicases
134019353 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
134019353
NCBI-ProteinID:
XP_062316167
LinkDB
All DBs
Position
1:complement(12083003..12090387)
Genome browser
AA seq
788 aa
AA seq
DB search
MLHSGSMLSHLDLIGTIQDDEDVPEDPDSESDNEDEQPIVLNKKRKAAQKGRGAGDFSTD
FEFGERDGLYSEDWAMADVMAQLKKRKAPTTLDEKIEKVRKKRKTEEKALTVTRTAEDKV
ADEKEMEDDEDEGEEEEEGEEGDDVKPVVGDGSEDSNEDDDDDGEEFTSGDEEVLTKADT
LREKAKRGKKKKTGEEPPQEFFEDASSYDDKLMFQDMNLSRPILKAITAMGFKQPTPIQK
ACVPVGLMGKDICACAATGTGKTAAFMLPVLERLVYKPRQNQVTRVLVLLPTRELGIQVH
AVARQLAQFTSVTTCLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELSQIE
ILILDEADRMLDEYFEEQMKEIIRMCAYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVN
SNTDVAPYLRQEFVRIRPAREGDREAVVAALLTRTFQDHVMVFTQTKKQAHRMHILLGLM
GLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKH
YVHRVGRTARAGKVGRSVSLVGETERRMLKDIVKKAKTPVKARVLPQDVILKFRDLIEKL
EKDVYAVMRLEREEREMSASEAQISVAQKRLAQNAEERDPQRTWFQTHEERKKERMTKAL
QDFDLALRGKKKREKFIKEGKKKELSAEDRAQFEMLKSQMYAERAAKRDRKPKRARAMPE
DEPVQKAMNQKGNKPSKKSVFDKELTNTSKKALKQYRAGPSFEDKKRLGIPTNKKGGRFK
SQAKFRRK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgctccacagtggcagcatgctgtctcatttagacctaatcggaaccatccaggatgac
gaggatgtgccagaagatcctgattcagaatctgacaacgaagatgagcaacctatagtc
ctgaacaagaagagaaaggctgcacagaagggcagaggtgctggagacttcagtaccgac
tttgagtttggagagagagatggactctacagtgaggactgggcaatggctgatgttatg
gctcagctgaaaaagaggaaagcccccaccacattggacgagaagattgagaaggttcgg
aagaaacgtaaaaccgaggaaaaggctttgacagtcactcggaccgcagaggataaggtt
gctgatgaaaaggagatggaggatgatgaagacgagggggaggaagaggaagagggggaa
gaaggtgatgatgtgaaaccagtcgttggagatgggagtgaggattccaatgaggatgat
gatgatgatggggaggagttcacctcaggagacgaggaggttcttaccaaagcagatacc
ttaagggagaaagcaaaacgaggcaagaagaagaagacaggagaggaacctcctcaagag
ttctttgaagatgcctccagctacgatgacaagctgatgtttcaggacatgaacctctcc
aggcccattttaaaggccatcacagccatggggttcaagcagcccacacccatccagaaa
gcctgtgtacctgtaggtctaatgggcaaggacatctgtgcctgcgctgcaaccggaact
ggaaagacggctgcgttcatgctgcccgtgctggaaagactggtctataaacccagacag
aaccaggtgaccagggtgctggtcctgttgcccaccagggagttgggcatccaggttcac
gcggtggcccgccagctggcacagttcaccagcgtcaccacctgcttggccgtaggcggc
ctggatctcaaatcccaggaagcagccttgcgagctgggcctgacgtcctcatcgccacg
cctggccgactgatcgaccatctgcacaacacaccatccttcgaactcagccagatagag
atcctcatcctggatgaggccgacaggatgctggatgagtactttgaggagcaaatgaaa
gagatcatccgtatgtgtgcctaccagagacagaccatgctgttctctgccaccatgagc
gaggaggtgaaggacctggcgtccgtgtctctgaagcagcccgtcaggatctttgtgaac
agcaacacagacgtggctccgtacctgcgccaggagtttgtccgaattcgtccggccagg
gagggcgacagggaggccgtcgttgctgctctccttacgcggacattccaggatcatgtg
atggtgttcacccagactaagaagcaggcccaccgtatgcacattctgctgggcctgatg
gggctgaaggtgggagagctgcatggaaacctgtcccagacccagagactggagagtctc
aggcggtttaaggatgagcagattgatatcctggtagccaccgatgtagcagccagagga
ctggatattgacggagtcaagacggtcatcaacttcaccatgcccaacactgtgaagcac
tacgtccacagggtgggccgcacggcccgcgccggcaaggtcggccgctccgtctccctg
gtgggagagacggagaggagaatgctgaaagacatcgtcaagaaggccaagacccccgtc
aaggcccgcgtcctgcctcaagatgtcattctgaagttccgagacttgatcgagaagctg
gagaaggacgtgtatgccgtgatgaggctggagagggaagagagggagatgtccgcctcc
gaggcccagatcagcgtggcccagaagcgactggcccagaacgccgaggagcgggacccc
caaaggacgtggttccaaacacacgaggagcgcaagaaagagcgcatgaccaaggcgctc
caggactttgacctcgccctaaggggaaagaagaagagggaaaagttcatcaaggagggc
aaaaagaaagagctatccgcagaggaccgggcccagtttgagatgctcaagtctcagatg
tacgcggagcgagcggccaagagagaccgcaagcccaaacgtgctcgagccatgcccgaa
gacgagccagtacagaaagcgatgaaccagaaaggcaataaaccgtccaagaagtcagtg
ttcgacaaggagctcaccaacaccagcaagaaagccctaaagcagtacagagcaggacct
tcctttgaggataagaagaggctggggattccaaccaacaaaaagggaggccgcttcaag
tctcaagccaagttcaggagaaagtag
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