Osmerus eperlanus (European smelt): 134019362
Help
Entry
134019362 CDS
T10927
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00310
Lysine degradation
oep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134019362 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134019362 (prdm2a)
03036 Chromosome and associated proteins [BR:
oep03036
]
134019362 (prdm2a)
Enzymes [BR:
oep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
134019362 (prdm2a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134019362 (prdm2a)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134019362 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
Zn_Ribbon_YjdM
zf-C2H2_11
zf-C2HE
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
134019362
NCBI-ProteinID:
XP_062316173
LinkDB
All DBs
Position
4:complement(20854448..20862455)
Genome browser
AA seq
1446 aa
AA seq
DB search
MEDSPKLNISKFGEDENVEEQQQEEEEEEEEDNDDYEEEEIEDKDSDSNASCQRPDAKLS
GNLNEGIEPVPEGMQEDSDRDADVELRDSFPCQHCDRHFTSSQGLERHLHIHALANHQTH
TFKCKYCSKSFGSKVGRRRHERRHERTRPGSLIKPVGSVCSPLNTDAASAAAGSCTSGSA
EGDPKSVCDERGESRGDHACKYCKKVFSTHTNMRRHQRRIHERHLRLKGKSLLSSSQATP
LKLSATSSQKDPKLVCETNPAVVQVNEGEQEQQYMLDISSNISENLSFYIDGKIVSTSTV
STCEVLEVNAGTALVSLDAVILNPAQIGQALNVEAATGKEIPGQPLTKRRTATPPLLPQI
KTELESESVLTSSSSSIMSSLIESLLPHNTESTVLQKEKTVFLSPKLKQLLQSQDGLRPT
LALITDGQNLCSPLSLTVLPAGSGRFKRRTGSPPNTPQQSPTLNVENTVPDQGDSAALIE
PQSKSHCSSPALDMSSNDDNASFPPVEEPITTCVLHDGWPSMSGGNSCNQQPLDLSAAVK
RSEDEASGEAVLDLSLQRKSPDDLETKGDVTLQPPAKKRKPDASMLAKVLRNEYANLDIS
GGEQGVDLCENSEAPLVTDIAIVTTSDISAATEGLVFGLALPAATLNPTPSSNLVSIHPS
SCTFALTASSTHTVLPTSPSLFTVLAPPTCTSTSGVVTPKISSEPFVICTDKPFNSDVQC
NLSTGLPDWATANAASLVTISQPIDPTLNLHSQMFLADPNINQMALTAPILHSTISSEVP
CPPALTLNDSLVNSFNITSNTVLIECTIALDAPENIVPTAITVQESLGEPPSPVEMVINH
VEQQQIVSMPHQDTAEPAYLVSSLAESVTLSTTATVIPDFPPDGEINETPVSDVKQEITQ
KEEKTEESIADSKNAIETTPETAPPTSTETAEEANDTKPVETFTKNFMCNVCDKLFHSMK
ELGHHVSEHSDTWPYKCEFCVQLFDNPSALLEHRSSLHGVGKIYICSLCTKEFAYLCNLK
HHQEELHQGQQCTHTEEEKGKLRPQNYNSSGKVNPETIPLKPPTESDRIVTKDEEELDEA
TEELFTTIKIMASDGLKVKGPDVRLGINQHYPSYKPPPFPYHNRSPAGSVASATNFTTHN
IPQTFSTAIRCTKCGKSFDNMPELHKHILSCANASDKRRYTPKKNPIPLRHFAKAQNGVL
SSTNATNGQNAPQMASQTNRPKSNHEAPPKQKLSALNKRKKQLVQRAITRRSKSGASSNK
VSSAQVEEEQEIFACPHCSREFTYRRSRTKHMAVCPMKPKETKKRKDGDVSFTKENNGHL
RRGAAQEEEKKQAPQQKTRAHSSNLAKRAANTPEQAVLANKKSRTIAKGSVQPQQEAPKL
TALSVVRPINSQRQDSRGQHGVKDVPNSVTVVNTRQAPPQTRQEVSPQADTPGSEGVSGQ
ERVGGE
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctccaaagttaaacatttcaaagtttggggaggatgaaaatgtagaggag
cagcagcaggaggaagaagaggaggaggaagaggacaatgacgattatgaggaagaggag
attgaggataaggactcggattcaaacgcgtcctgccaaagacctgacgccaaactctct
ggaaacctgaatgagggtatagaaccagtccctgaggggatgcaagaggattctgaccgt
gacgctgacgtcgaattacgtgactcattcccctgccagcactgcgacagacatttcacc
agtagtcaaggcttggaacgtcacttacacatacacgctttggccaaccaccagacgcat
acatttaaatgtaaatactgcagcaagtcttttggctcaaaggttggtcggaggagacat
gaaaggaggcatgagaggacgaggcctggctcgttgataaagccagtgggctctgtgtgt
tctccgttaaatactgacgctgcctctgcggcagctggctcctgtacctcaggttcggca
gagggagatcctaaatccgtctgtgacgagcgtggagaatcacggggcgatcatgcctgc
aagtactgcaaaaaggttttcagcacgcacacgaacatgcgacgacatcagcgcagaatt
cacgagcgacacctcaggctcaaaggaaagtccctgctgtcgtcgtcgcaggcaacgccg
ctgaaactgtcggccacgtcgtctcagaaggaccccaagctcgtctgcgagacaaaccca
gctgtagttcaagtgaacgagggagaacaagagcagcagtacatgctcgacatctccagt
aacatctcggagaacctcagcttttatatcgacgggaagatagtgtcgaccagcactgtc
agcacttgtgaagtactggaagtcaacgctggaactgccctggttagcctggatgcggtg
attcttaatcccgcccagattggccaggctctgaatgtggaggctgctacagggaaagaa
atccccggtcagccattgacgaaaaggagaaccgcaacaccgcctctgctaccacaaata
aaaaccgaactggaatcagagtcagtacttacatcctcttcctcgtctattatgtcctca
ctgatagaaagtcttcttcctcataatacagagtctactgttctccagaaggagaaaact
gttttcctgtcgcctaaactaaaacagctcttacagagtcaagatggcctcaggcctact
cttgccctaattacagatggccagaatctatgttcgccactctccctcactgtcttgcca
gcaggatccgggaggtttaaaaggagaactggatctcctccaaacacaccgcaacaaagc
ccgacgttaaatgttgaaaacacagtacccgaccaaggagattcagcggcgctcattgaa
ccgcagtcgaaaagtcactgtagttcacccgcactcgacatgtcgagtaatgatgacaat
gcttcctttccgcctgtggaggagccaattacgacttgcgtcctgcacgatggctggcct
tcgatgagcggtggtaattcctgcaaccagcaacctctggatctctctgctgccgtcaaa
agaagcgaagacgaggcgtccggggaagcggtgttagatttgagtttgcaaagaaagagc
cctgacgatttagaaacgaagggagatgttacacttcagcctccagccaaaaagagaaag
cctgacgccagcatgttggcaaaggtcctaagaaatgagtacgcaaacctagatattagc
ggcggcgagcaaggagtggatttgtgcgaaaattccgaggcacctttagtcacagacatt
gctatagtaaccacctctgacatatcagctgctactgaaggacttgtgtttggattggcc
cttcccgctgctacactcaatccaacaccttcctctaatctggtctccatccatccttca
tcatgtacttttgcacttactgcttcttctacacatacagtactcccaacttccccctca
ctgtttacagttttagcaccacccacttgtacttcaacctctggtgttgtgaccccgaaa
atatcctcagaaccttttgtcatctgcactgacaaaccgtttaactcagatgtgcagtgt
aatttgagcactggcttgccagattgggctactgccaatgctgcaagcctggttaccatc
tcccagcctattgacccaacacttaatctacacagtcaaatgtttcttgccgatcccaac
attaatcaaatggcactcactgcaccgattcttcactcgaccatcagctctgaagttcct
tgtccaccagctttgactcttaacgattctcttgtcaactcctttaacattacaagcaac
actgttttaatcgaatgtaccatagccctagatgccccagagaatattgtcccaactgct
ataacagtacaggaaagccttggggaacccccatcaccagttgagatggtcataaatcat
gttgagcagcaacagattgtttccatgcctcatcaagacactgctgaacctgcttatcta
gtatcctccttagcggaatctgtcactctttcaaccacagctacggtcatacctgatttt
cctcctgatggagaaataaatgaaacccctgtctccgacgtaaaacaggaaataacccaa
aaagaggagaaaacggaagaatcgatagctgactctaagaacgccattgaaacgacacct
gaaacagccccacccacctccactgaaacggcagaagaagcaaatgacaccaagccagtg
gagactttcacaaagaacttcatgtgcaatgtttgcgacaagctttttcattctatgaag
gagctgggccatcacgtaagtgagcattctgacacgtggccgtacaaatgcgagttctgt
gtgcagctgttcgacaacccatctgctttgctcgaacaccgctcgtccctccacggtgtc
ggcaagatctacatttgcagtttgtgtaccaaggaatttgcctacctttgcaacctgaaa
caccaccaggaagagctgcatcagggccagcagtgcacccacacagaggaagagaagggc
aagctacgaccccagaattacaacagttcggggaaagtcaacccagagactataccgctc
aaacccccaacggagtccgatcgaattgtaacaaaggacgaggaagaactggacgaggcc
accgaggaattattcacaacaataaagataatggcttctgacggactaaaggtcaaaggt
ccagatgtgcgccttggtatcaaccagcattaccccagttataaacctcctccttttccc
taccacaatcgctcgcctgctggctccgtggcgtcagccactaacttcaccacccacaat
atccctcagaccttcagcactgcaatccgatgcaccaagtgtggcaaaagctttgataac
atgccagagcttcacaaacacatcctttcctgcgccaacgccagtgacaaaagacgttac
acgcccaagaagaatcctattccacttcgacactttgcaaaagcccaaaatggagtgttg
tcttctactaacgctacaaatggacagaatgccccccagatggcgagtcaaaccaacagg
cccaaatcaaatcatgaagcccctcccaaacagaagctaagtgcactcaacaaaaggaaa
aaacagttggttcaaagagccatcacgcggaggagtaagtcaggcgcttcgtctaataaa
gtctcctccgctcaagtggaggaggagcaggagatctttgcctgtccgcactgcagtagg
gagttcacgtaccgccggagccgaactaagcacatggcagtgtgccccatgaaaccgaaa
gagacgaagaagagaaaagacggagacgtctccttcactaaagaaaacaacgggcacctt
cgacgaggagcagctcaggaagaagagaaaaagcaagcaccccaacagaagaccagagcc
cacagttccaacctagccaagagggcggccaacacacctgaacaagcggttctagcaaac
aaaaaaagtagaaccatcgcaaagggaagcgtccaaccacagcaagaggctcccaagctc
acggctctgtccgtagtgcggccgatcaactctcaacgccaagacagtaggggacagcat
ggtgtcaaagacgtccctaacagcgttactgtggtaaacaccagacaggctcccccacag
actaggcaggaggtttccccacaggcagacacaccagggagtgagggagtgtctggccag
gagagggttggcggtgaatga
DBGET
integrated database retrieval system
