Osmerus eperlanus (European smelt): 134019390
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Entry
134019390 CDS
T10927
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134019390 (cntn3a.2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oep00537
]
134019390 (cntn3a.2)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
Contactins
134019390 (cntn3a.2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oep00537
]
Others
134019390 (cntn3a.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Ig_4
Pur_ac_phosph_N
Tissue_fac
DUF7342
Motif
Other DBs
NCBI-GeneID:
134019390
NCBI-ProteinID:
XP_062316240
LinkDB
All DBs
Position
4:21418692..21451960
Genome browser
AA seq
1025 aa
AA seq
DB search
MTLPWKQILLLSIIDCVADCLDSGSFHGPRWRMEPGDLFIPIDSLEEEATLTCDARGTPP
PQYRWSLNGTLINLGLGSRRRLSGGNLIIRSLDRYQDAGMYQCTAYNTVGSILSRRASLQ
FAYLDHFKPHTRSAVSVREGQGVVLLCGTPTSSGDLSYAWVFNEYPYFVQQDSRRFVSQE
TGNLYIAKVETSDVGNYTCVVMNSVTKGKVHSSPTSLVLRTDGVMGEYEPKIEVHFPDNV
PAAKGSVVTLECFALGNPVPEITWKRANGIPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNIATGRLAFHAKPQWIQTMKDTAMAIEERLYWECRANAKPKPSYSWLKNNKI
LVSEDRIHVDDGILSVSVLTLADAGMYQCMAENKYGVIYFSAELMVLASPPDFTGSLLRA
LLKAKAGSTVSLECKPQAYPTASIVWKKGNLPIHTSDRVTLSPDGTLRLSNVTKSDAGSY
TCFARNRFGTSSTTGRLLVTDPTRITQGPVDMDIMVGESLVLPCQVASDPVLDVTFSWAF
NGQLIAKGDHHFELVGGRLSGDLMVRNIQLIHAGKYICVVDTDVESLSAVAILIVKGPPG
PPDTVTVEEVTDSTAQLSWSTGRDNGSPITTYLIQARTPFTVGWQRVNTVPEVIEGSTRT
ATVVDLNAWVEYEFRVLARNSVGVGEPSPSSLKTRTEDAVPDSAPADVGGGGGSRSELVV
TWEPVPEEFQNGESFGYIIAFRAFGEVVWTHVATSAPGASRYVHRNDSIVPFSPFHVKVG
AYNSKGQGPFSPVVTIYSAEEEPSLVPGGVGAQSVSASEIEVTWQSLSFATERVLGYEVV
YWEDDTKPETMGKVRVPSNQTTATVGGLTGNSQYFLTVSAFNTAGTGPFLPAINATTKKP
PPGQPPLNVEWTLIGSLLILHWDAVVTMETESEATGYKVSYRRLKHREVSSLTTTNSTAE
LTLPDDDDYIVHIRALSEGGLGPSTDAIQIHKLSMSARGSRGWSLNRAPLSLLLAIALST
CRSTS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaccatggaaacagattctactgttatcaatcattgactgtgtggcagactgc
ctggacagtggctccttccacgggccgaggtggaggatggagcctggagacttgttcatc
cccatcgactccctggaggaggaggctaccctgacgtgcgacgcaagagggaccccccct
ccccagtacagatggtcgttgaacgggaccctcataaatctgggactgggtagccgacgg
cggctgtctgggggcaacctcattatccggagtctggatcggtaccaggatgcagggatg
tatcagtgtacagcctacaacacagtggggtctatactcagccggagagccagcctgcag
tttgcctacttggatcattttaaaccccacacgagaagtgccgtgtcggttcgagaagga
caaggagttgtgctactgtgtggaactcccacatcctctggagaccttagctatgcctgg
gtctttaacgagtacccgtacttcgttcaacaagacagccgacgtttcgtgtcccaggag
accgggaacctgtacatcgcgaaggtggagacgtcggacgttggcaactacacgtgcgtg
gtgatgaacagcgtgaccaaggggaaggttcacagctctcccacttcgctagtcctcagg
accgacggagtgatgggtgaatacgagcccaaaatagaagttcattttcctgacaacgta
ccggcagcgaagggatcagtggttacactggagtgttttgctcttgggaatccggtccct
gagattacctggaagagagccaacggtatccctttccccagcaaggtgaagatgaagtac
tccaacgcggtattggagatacccagcttccagcaagatgacactggtggctacgagtgc
gtagcggaaaacaagatgggcaagaacatcgctacaggtcgcctcgctttccacgccaag
ccccagtggatccagaccatgaaggacacagccatggctattgaggagaggctgtactgg
gagtgcagagccaacgccaagcccaaaccgtcctacagctggctgaagaacaacaagatt
ctggtctctgaggacaggatccatgttgacgatggcatcttgtctgtgtctgtgctgacc
ctggctgatgctgggatgtaccagtgtatggcagagaataaatatggtgtgatatatttc
agcgctgagctcatggttttggcctctcctccagacttcacagggagcctcctcagagca
ctgctgaaggccaaggcaggcagcaccgtgagtctggagtgtaagccccaggcctacccc
accgccagcattgtgtggaagaagggaaacctgcccatccacaccagtgacagggtcact
ctgtcaccagacggaaccctcagactctccaacgtcaccaagtcggacgcagggagctac
acgtgctttgccaggaaccgatttggaacctccagcaccaccggcagactcctggtgact
gaccccacccggatcacccagggtcctgtggacatggacatcatggtgggagagagtctg
gtgcttccctgtcaagtggccagcgaccccgtcctcgacgtcaccttttcctgggccttc
aacgggcagctgatcgccaaaggagaccaccactttgagctggtgggagggagactgtct
ggagatctgatggtgaggaacattcagcttatccacgccggcaagtacatctgtgtggtc
gacacagacgttgagagcctgtcagcggtggccatattgattgtgaaagggcccccaggc
cccccagacacagtgactgtggaggaggtgacagacagcacagcacagctctcctggagc
actggccgagacaacggcagccccatcaccacctacctcatccaggcgaggacacctttc
actgtgggctggcagagagtcaacacagtccctgaggtgatagaggggagcaccaggaca
gccacagtggtggatctgaacgcctgggtggagtatgagttcagggtgctggccaggaac
agtgttggggttggagaacccagcccttcatctctgaagacaaggacagaggatgcagtt
cctgactccgcacctgccgacgttgggggggggggcggcagtcgatcagagctggtcgtc
acctgggagcccgtccccgaagaatttcagaacggtgagagcttcggttacatcatcgcc
ttccgggcctttggcgaggtcgtgtggacgcacgtggcgacctcggcgccgggagcatca
cgttacgttcaccgcaacgacagcatagtgccgttctccccgttccacgtgaaggtgggg
gcctacaacagcaagggccaggggcccttcagtccagtggtcaccatctactctgcagag
gaagagcccagtttggtgccggggggagtaggggcccagagtgtctctgcctctgaaata
gaagtgacctggcagagtctctccttcgccactgaaagagttctgggctacgaggtagtg
tactgggaagacgacaccaaaccagagaccatgggcaaagtgagggtgcctagcaaccag
accacagcgaccgtgggtggcctgacaggaaacagtcagtattttctcaccgtcagcgcg
ttcaacaccgctggcactggccccttcctccctgccatcaacgccaccacaaagaaacca
ccaccagggcaaccgccgctgaacgtggaatggactctgattggctctctgctcattcta
cactgggatgctgtggtgactatggaaacggagtcggaagctactggctacaaagtttcc
tacaggcgtctgaaacaccgggaggtgagctccctcaccaccaccaactccacagcggag
ctgacccttcctgacgatgatgactacatcgtccatatcagggcgctcagcgagggaggg
ctgggcccttccaccgatgccatccagatacacaagctgagtatgagcgctcgaggctcg
cgaggctggagtttgaacagagcacctctctctctgctcctcgccatcgcattatcaaca
tgcaggtccacgtcatga
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