Osmerus eperlanus (European smelt): 134020666
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Entry
134020666 CDS
T10927
Symbol
shank3a
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
oep Osmerus eperlanus (European smelt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
Ank_2
SH3_2
SAM_2
Ank_4
Ank
SH3_9
PDZ_6
Ank_5
Ank_3
SH3_1
PDZ
FERM_f0
2C_adapt
Motif
Other DBs
NCBI-GeneID:
134020666
NCBI-ProteinID:
XP_062316813
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All DBs
Position
5:complement(18794267..18907813)
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AA seq
1850 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQQQHTHTHAHPYTHTANGSQGGRSDSGSSQEEGSGVPASVY
VPAFRPAPELSSSSGGHMEEPQGHTLVVRIGIPDLQQTKCMKFDADSSYWLSKQRILCTL
NQSLKDVLNYGLFQPSHNGKAGKFLDEERQLRDYPLPSITPVPYLEFRYKRRIYTQSHLD
DKQLSKLHTKANLKKFMEYVQQRNMEKISRFLEKGLDPNFHDPETGECPLTMASQLEGCA
ELIKGLKSGGAHLDFRTRDGITALHKAVRTKNHTALITLLDLGASPDYKDSRGLTPLYHS
SMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRHGHVQHLEHLLFYGADMSGQNASG
NTALHVCALYNQKKYNPHRRNNQGACRLTVPLATMSVTTGFSYQLPGITTVTYVFVYSPG
SVQRDPSPPPHTPPALTGARGPKRKLYSAVPGRTFIVVKPYTPQGEGEIQLNRGERVKVL
SIGEGGFWEGTVKGRTGWFPADCVEEVQMRQFDPRLDLPVLCSRIDGVVTVVKAEQPYCM
CRGGYQAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHK
QVVSLIRQGGNALLMKVVSVTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEEL
ASARRRRGERLDEMLASQEPMLRAQPSEVDYRAATVKQRPTSRRITPAEISSLFERQGMT
LHGGLHPGMERGHMQLPRGMSRTKSFGASEEERLSALAAEHHFPRSSSMTDSLREHAQPH
PIPPPPQTAPPPPPSHYYLDTGPPPAFCPPPPPARVHSQGHDPGARSSFKPSSLDLPSEA
SSRQSFSHAERQKKARSMIILQDSSHLPVEPTDIPRPSATGTPPERIKRKGRVIDNPYAN
VGQFSIGLYTPTKPQRKKSPLVKQLQVEDAQERASLALAAGHSREPSPSGRHTHGHAHTH
TSRADYYQQQLLAERERLRAQGEALLQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVG
TMEGGSGPDPEAPSLTQSRSIDERMLTRELGQLPPPALALRPSLGGTTFIHPLTGKPLDP
NSPLALALAARERALTSQSQSPASSPEPRTKQERPGLFSDTQTKESQQGEGSPPFPPQST
MVVGYGGVGALPGAGAGKAQWGTSSPALHRQDMEGRAQDRKEEKRTEDKKSMLISIMDTS
QQKTAGLIMVHATSNGQAVGLGAGLDQAPTSTTSDPTKPSSPRAASPSPTPSQPQAQTQA
QPQPQPQAQPQAQPQTQPQAQPQTQPQDQTAASPGQDKALVQGSSEEDVEPYTVTLPPAM
LSSSDEETREELRKIGVVPPPNEFANGLLAQAQAQAKAQAKAQAQGTPTSPTKPATTSPT
TPPTHIPLTPLAPTPILTPTQAQAPHLQPTPSGAAVSGKPSDPLEPPPMGESGSAADSGV
EEADTRSSSERERDHHLETTSTVSTVSSMSTLSSESGEPADTHTTHTSYADGQTFVLDKP
PVPPKPRLKSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAVAAAGGTALGSGGLGS
ASMSGLAPGRPRYLFQRRSKLWGDPVEPRGPGLGLGVGSLGNLGGLGLGLGLGLGSEEGW
KPSVMGELSSRLQQLNKDTRSLGEEPLGASLDPGRKSPVTGARLFSSLGELHTISQRSYG
TTYTIRPGSRYPVTRRTPSPGAGSPDRGDPLGRLTGFGLPTSPTMPPHTILKSSSLSLPH
EPKEVRFVMRSSSARSRSPSPSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESIN
LGEHRAGFQEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKQLLES
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagccctccacggcaggaccag
cagcagcacacacacacacacgcacacccctacacacacacagccaacggcagccagggg
ggcaggtctgacagcggcagctcccaggaagagggcagcggtgttcccgcttccgtttac
gttccggctttccgaccggctccggagctgagctctagttcaggaggacacatggaggag
ccgcagggacacacgctggtcgtccgcataggaatcccagacctgcaacagacgaaatgt
atgaagttcgacgcggacagctcctattggctgtccaagcagaggatcctctgcactctc
aaccagagcctgaaggacgtcctgaactacggcctgttccagccatctcacaacggcaag
gccggcaagttcctggatgaagagcgccagctgagagactaccccctcccctccatcacc
cctgtaccctacctggagttccgctataagaggcgtatctacacacagagccacctggat
gacaagcagctgtctaaactccacaccaaggcgaacctgaagaagttcatggagtatgtt
cagcaaaggaacatggagaagatctccaggttcctggaaaaaggactggaccccaacttc
cacgacccagagacgggagaatgtcccctgacaatggcgtctcagctggagggctgtgca
gagcttatcaaggggctgaagagtggaggggctcacctggacttcaggacaagagacggc
atcactgccttgcacaaggctgtgcgcaccaagaaccatacagcgctcataacgttgttg
gacctgggtgcatcacctgactacaaggacagtcgaggattgacgccactctaccacagc
tctatggtgggaggagacccctactgctgtgaactgctgctccacgaccacgctcaggtg
ggctgtgtggacgagaacggctggcaggagatccatcaggcatgtcgccacggccacgtg
caacacctggaacacctgctgttctacggagccgacatgagtgggcagaatgcgtctgga
aacacagccctgcacgtgtgtgctctctacaaccagaaaaaatacaacccccatcgccgt
aacaaccagggggcgtgccggctgaccgtccccttggcgaccatgtcggtgaccacgggc
ttcagctaccagctccctggcattaccacggtaacatatgtgtttgtttacagccccggg
agtgtgcaacgggaccccagcccaccgcctcacacccctcccgcgctgacgggcgctcgc
gggcccaaacggaaactctacagcgccgtcccaggacgcaccttcatcgtggtcaagccc
tacaccccacagggcgagggcgagatccagttgaaccgaggagagagggtcaaagtgctg
agtataggtgaaggagggttttgggagggtacggtcaaagggaggacaggctggttcccg
gcagactgcgtggaggaggttcagatgaggcagttcgaccctcgactagatctgcctgtg
ctctgcagcaggatagacggcgtagtgaccgtcgtcaaggcggagcagccctactgcatg
tgtcgtggaggctaccaggctgagacgcccatcgaggagtttacgcccaccccagccttc
cctgcgctgcagtacctggagtctgtggacgtggagggagtggcctggagagcagggctg
aggactggagacttcctcatcgaggtgaacggggtgaatgtggtgaaggtgggccacaag
caggtggtgtctctgatccgtcagggaggcaacgcgctgctgatgaaggtggtctctgtc
acgcgcaaacccgagtctgaggaggtggtccgcaagaaagcccccccgccacccaagagg
gctcccagcaccaccctgactctacgctccaagtccatgactgctgagctggaagaactg
gcttctgctcggaggagaagaggagagaggctggatgagatgctggcctcccaggagccc
atgctgagagcccagccctcagaggtggactacagagcagccaccgtcaaacagcggccc
accagtagaaggatcacacccgcggagatcagttcgctgtttgagagacaggggatgact
ctacatggaggtctccacccagggatggagagggggcacatgcagctgcccagaggcatg
tccaggaccaagtcctttggtgcatctgaggaggagcgtctgtctgccctggccgctgag
caccacttcccccgcagctcctccatgacggacagcctgcgagaacacgcccagccccac
cccatcccgcctcccccgcagacggcccccccgcctcccccctcccactactacctggac
acaggccctcccccggccttctgccctccccctcctcccgccagggtccacagtcagggt
cacgacccgggggcgcgctccagcttcaagccgtcctctctggacttgccctcggaggcg
tcctcgcgccaaagcttcagccacgccgagagacagaagaaggctcgctccatgatcatc
ctccaagactcctcccatctccctgtcgagccgaccgacataccccgcccctccgcaacc
ggcacaccccctgagcgaatcaaacggaaagggcgggtgattgacaacccttatgccaat
gtgggccagtttagcattggactgtacacgcccaccaagccccagcgcaagaaaagtcca
cttgtcaaacagttgcaggtggaggacgcccaggagagagccagcctggccttagctgcc
ggacactcccgagagccctccccttctggccggcacacccacggccacgcgcacacacac
accagccgcgcagactactaccagcagcagctgttggcggagcgcgagcgcctacgcgcc
cagggagaggctctgcttcaggggaagggcccgttcgcggcagccatcgccggagccgtg
aaggaccgcgagcgccgcctggaggagcgaaggaaatccaccgtcttcctgtccgtgggg
accatggagggggggtctggacctgaccctgaggccccctccctcactcagtcgcggtcc
atcgatgagcggatgctcacaagagagctgggccagttgccccccccagcgctggccctc
cggccctcccttggagggaccacctttatccacccgctgacgggcaagcccctggacccc
aactcgcccctggctcttgcgctggccgcaagggagagggcgctgacgtcccagagccag
tccccagccagcagcccagagcccaggactaaacaggagcggcctggcctcttcagcgac
acccagaccaaagagtctcagcagggggaagggtcgcctcctttccccccacagagcacc
atggtagtggggtatggtggagtgggagcccttccgggggctggagccggtaaggcccag
tggggaacgtcttcacccgccctccaccgtcaggacatggagggaagagcacaggacagg
aaggaggagaagaggacagaggataaaaagagtatgttaatcagtatcatggatacttct
cagcagaagactgcaggcctcatcatggtccatgctaccagtaatggccaggctgtcggg
cttggggctgggttggatcaggcccccacctcaacaacatctgatcccaccaagccctcc
agtccccgggctgcttcccccagccccacaccttctcaaccccaggcccagactcaggcc
cagccccagccccaaccacaggcccaaccacaggcccaaccacagacccagccacaggcc
cagccacagacccagccacaggaccagacagcagccagtccaggccaagataaggctttg
gtccagggcagctcagaggaggatgttgagccttacacagtgacactgccccccgctatg
ctgtcgtccagtgacgaagaaacccgcgaggagctgcgtaagattggggtggtccctcca
ccaaacgagtttgctaatggactgctggcccaggcacaggcccaggcaaaggcacaggcc
aaagcccaggcacaggggaccccaacatccccaacaaaacctgccaccacctccccaacc
acacctcctacccatatacccttgacccccttggcccccactcccatcctgacccccacc
caggcccaggctccccaccttcagcctacccccagtggagcagccgtctcagggaagccc
tcggatcctctggagcctccgcccatgggggagtctggctcggcggccgactctggcgtg
gaggaagctgacacccgcagctccagcgagcgggagcgagaccatcacctggagaccacc
agcaccgtctccaccgtctccagcatgtccacgctgtcctcggagagcggcgagcccgcc
gacacacacaccacacacacctcctacgccgacgggcagaccttcgtgctggacaagcca
cctgtgcctcctaagccccgactcaagtcccagataggaggcagtaaaggccctgtcacc
ttcagggaccctctgctgaagcagagctctgacagcgagctgctatcacaacaacaggct
gccgctctggctgtagccgcggctggggggacggcgctgggctctgggggcctgggctct
gcctccatgtctgggctagcccccggcaggcctcgctacctcttccagaggaggtccaag
ctgtggggagaccccgtggagcctcgaggccccgggttggggttaggggtggggagtctg
gggaatctgggaggactggggctggggttaggtctgggactgggaagtgaggaaggatgg
aaaccgtctgtgatgggggagctgagtagcagactacagcaactgaacaaagacactaga
tcactgggagaggagcctttgggggcatctctggaccctgggaggaagtcacctgttaca
ggtgccagacttttcagcagtctaggagagctgcacaccatttcccagagaagctacggc
accacatacaccatccgcccaggcagccgctacccggtaacacgacgcacaccaagcccg
ggcgcaggctcccctgaccgaggggatccgctcgggcgactcaccggattcggcctgccc
acttctcccaccatgcctccccacaccatcctcaagtcctccagcctcagcctgccccat
gagcctaaggaggtccgctttgtgatgaggagctccagtgcccgctcccgctccccatct
ccatccccctctcactcccccgggctgggctctcctctcctggctctcaggcccttccac
cagaagcccctccacctgtggaacaagtatgacgtgggggactggctggagagcattaac
ctgggggagcacagagcaggcttccaggagcacgagattgagggctcccatctcccagct
ctgaccaaggatgattttgcagagctgggcgtgacgcgtgttggacaccgcatgaacatc
gaacgagcgctcaaacagctgctggagagctga
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integrated database retrieval system