Osmerus eperlanus (European smelt): 134020731
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Entry
134020731 CDS
T10927
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134020731 (cdhr5b)
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Cadherin related
134020731 (cdhr5b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
KAAG1
Motif
Other DBs
NCBI-GeneID:
134020731
NCBI-ProteinID:
XP_062316923
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Position
5:1398565..1402625
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AA seq
640 aa
AA seq
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MIIFIENINDNPPVFAQSQYSLSVKELTPVDTSVGKISATDRDDDRLFYTLDPDTAGFKL
QGINTPNIMVQSVLDYDTVKSVSLTLYVQDTPPGGAPGGGPSYSASATILVTIQDIDNRP
PWFQPCTSTVVGTAKICVSHGYSGQVNLTVQEVGALSLQPGPVYAIDGDSGINEKMTYSF
LSGNEAGIFEINANSGNITMTKPVDLPGPLVLTVLAMQQVDSDKFATATVTLEVVKKSLN
LPTFTLPEYKGFISEDAGQGSMVLAGRGSTTPLRVLAADKDFADGVNPDVRYEVLRTTDF
SATPQGFILLAKDLSPGTVTIQLRAVDSSNEESSTAPLVVEVTPGIPTTTTATTSSTDMT
PTSVDVTSDTTHAPNSSTSNPSMTSQDSLTSTLSARTESPTEGVLGPGGDGYSVVDMVAL
GVSLAVLLVICMVVIGLLVLHLQKGKAAWRKLSEASIFRSSLGAGSGGAKEGVQYTNEGF
QKDDDASSTGSHVPDEVDVRRGSGPGAKAVELPQEEVVPRASAPLHALLPDSSSLDGSDP
ADSEREVKPILTKERRVEEGYKSVWFKEDIDPNAKEEVVIIPNNADRDGDDEESLGGGEE
EDDLPRSTPKVFFTNADVDSGLEGQSNQESDDDEIQISDL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatcatatttattgaaaatataaatgataatccaccggtctttgcacaaagccagtac
tctctgagtgtcaaagagctgacacctgttgatacgtctgttggtaaaatttctgccacc
gacagagatgatgatcgcctcttctacaccctggatccagacacagctggctttaaactg
caaggaatcaacactcctaatattatggtgcagagtgttttagactatgataccgtcaaa
agtgtgtcgcttacactatatgttcaggacactccaccagggggcgccccggggggcgga
ccatcatactcagcctcggccaccatcctggtcaccatacaagacattgacaaccgtcct
ccgtggttccagccctgcacctccaccgtcgtgggcacagccaagatctgcgtcagccac
ggatactcaggccaggtcaacctcaccgtccaggaggttggtgcgttgtccttacaacct
ggaccagtgtatgccattgatggagactctggtataaacgagaagatgacatatagcttt
ctaagtgggaacgaggcgggcatatttgaaatcaatgcaaacagtgggaacatcacgatg
acaaagccagtggacttacctggccctctggttctaacagtcctggccatgcagcaagtg
gacagcgataagtttgcgaccgccacagttaccctggaagttgtgaagaagagtttgaac
ctgcctacgttcaccctgccagagtacaagggtttcatctcagaggacgccggccagggc
agcatggtcctggccgggagaggctccaccacgccgctgagagtcctggccgccgacaag
gactttgcagacggagtgaacccagatgtgaggtatgaagttctcaggacaacagacttc
tctgccactccgcaaggcttcatcctgttggccaaagacctcagtccaggaactgtgacc
atacaattaagagctgttgactcatcaaatgaagaatcaagcacagcgccattagtcgta
gaggttactccaggaattccaaccacaaccacggcaaccacatcctccacagacatgacg
cccacgtccgtagacgtgaccagtgacaccacgcatgcacctaactcctccacctctaac
cccagcatgacctctcaagacagtctcacttccaccttatcagcccgtacagagagtcct
acagagggtgtcctggggccggggggagatgggtacagtgtggtggacatggtggcgctg
ggggtcagtctcgccgtcctcctggtcatctgcatggtggtcattggactcctcgttctt
cacctccagaagggaaaagcagcctggaggaaactgtctgaagccagcatcttccgcagc
tctctgggagcgggctccggcggggccaaggagggggtgcagtacaccaacgagggcttc
cagaaggacgatgacgccagcagcaccggctcacacgtcccagacgaggtggacgtccgg
cggggaagcggcccgggggcaaaggcggtggaactgccccaggaggaggtggtcccgagg
gcctcggccccgctgcacgccctgctccctgacagcagcagcctggacggatcagacccg
gcggacagcgagagggaggtgaagcccatcctcaccaaggagaggagagtggaggagggg
tacaagtctgtctggttcaaagaggacatcgaccccaacgccaaggaggaggtggtcatc
atccctaacaacgcggaccgggacggggatgatgaggagtctctgggaggtggggaggag
gaagatgatttgccacgctcgactccgaaggtgttctttactaacgctgatgtggacagt
ggacttgagggtcaaagtaaccaggagtccgatgatgatgagattcaaatatctgacctc
taa
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