Osmerus eperlanus (European smelt): 134020747
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Entry
134020747 CDS
T10927
Symbol
cacna2d4b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04260
Cardiac muscle contraction
oep04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134020747 (cacna2d4b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
134020747 (cacna2d4b)
04261 Adrenergic signaling in cardiomyocytes
134020747 (cacna2d4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134020747 (cacna2d4b)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134020747 (cacna2d4b)
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA_2
VWA
MCP-like_PDC_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
134020747
NCBI-ProteinID:
XP_062316943
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Position
5:1571962..1616785
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AA seq
1114 aa
AA seq
DB search
MDFSVRMMPSVGEVRVEPRTGGGLRLGLWVLCLHWLCLTTHAQMKIPPETVQKWASTLSV
QLREVSTKFSGSLLLQKKLKDVEPIVKIVELDGRELVKDISDEIEAMLGRKMKSVKRLAE
SAEDADLYHEFNATLQFDYYNSMMINTMDDEGNFIPLGGEFPLEENKHFNKLPVNTLQSD
VQVPTNVYNKDPNILNGIYMSEALNDIFISNFQKDPTLTWQYFGSSSGFFRIYPGIKWTP
DANGVAAFDCRNRNWYIQAATSPKDIIILVDISGSMKGLKMTIAKHTINTILDTLGENDF
VNVIAYTDYVRYVEPCFRGTLVQADLDNREHFKVLVDELHVKGEAKIKVAMKEAFKILNE
ASTKGQGSLCNQAIMLITDGAMEDFQSVFEEFNWPDRRVRVFTYLIGREMTFADNTKWIA
CNNKGYYTHVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLFNTKAQSLLL
MTSVAMPVFSKKKETLSHGILLGVVGSDIPLLEVMKLAPRYMLGPHGYAFLVTNNGYILS
HPDLRPLYKDGKKLKPKPNYNSVDLAEVEWEDTQETLRTAMVKGEMGSLTLNIRASVDKE
KRPLFLINNYFYTNIDETPFSFGMVLTQGHGQLMVLGNVSVEEGLHDLTSPDLSIAAEWT
YCETDIDPHHRKYTQLQAAIRYLQGKEPDLECDELLLQQTLFDAVVTAPMEAYWTALLLD
PNGLEPGVEAAFLGTRSGLLRVLRYAGVETRVAKKFLTPVDKANLFTLDHFPLWYRLAVE
NRPGQFYYYVPMEENNKGGGKFVVAVTAVTVTSKGKTAIAGAVGVQMSLDMLERRLWAIA
KQPDGTDCSDIEGVCPLSCESIDLNCYLVDNNGFIMVSKERAEVGRFFGEVDGSVMASLI
KSGMYKKVSLFDYQGMCRSSHHHASSARPLLSPFYGLAAILRWLFSNMLMFILDFNFCGL
WHSDYFVEAKAGYHTSHKQKKVDALQPCDTAYPGFMYDYSIRETNSLIKCGRCQKMFVVQ
KVPDSNLLLMVVQADCDCSRQYSAILLEPKEIKYNASVKCNRMKSQKVRRRPESCHSYHP
KENAKDCGGACEITLSATLFLVSLACSLVLHRWT
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcggtacggatgatgccttcggtcggcgaagtcagggtggaacccaggact
ggaggagggctgagactgggactgtgggtcctgtgtcttcactggctctgtctcaccaca
cacgctcagatgaagatacctccagagacggtccagaaatgggccagtacactgtctgtg
caactgcgtgaggtttctacaaaattctctggatctctccttctacaaaagaaactcaaa
gatgtggagcccatcgttaagatcgtggagttggacggcagggaactggtgaaggatata
tcagatgagatcgaggccatgctgggacgcaagatgaagtcagtcaagaggttggcagag
tcggctgaagacgcagatttgtaccacgaattcaacgcaacattacagtttgactactat
aactccatgatgattaacacgatggacgatgagggaaactttataccgctgggaggggag
tttcctctggaggaaaacaagcatttcaataaactgcctgtcaacacgctgcagagcgac
gtgcaggtgcccaccaatgtctacaacaaagatcccaacattctcaatggaatctacatg
tcagaagctctaaacgacatcttcattagcaacttccagaaggatccgacactcacctgg
cagtactttggcagctcttcaggatttttcagaatttaccctggtatcaagtggacacca
gatgccaatggtgtagcagcctttgattgcaggaaccgtaactggtacattcaagctgca
acttcaccaaaagacatcataatcctggttgacatcagtggaagtatgaaagggttgaag
atgacaatcgccaaacacacgatcaacaccatcctggacacgctgggagagaacgacttt
gtcaacgtcatagcctacacagactacgtccgttatgtggagccttgtttcagaggcact
ctggttcaggctgacttggacaaccgcgagcacttcaaggttcttgtggatgagctgcat
gtgaaaggagaggccaagatcaaggtggccatgaaggaagccttcaaaatcctcaacgag
gcctccaccaaaggccagggcagcctgtgtaaccaggccatcatgctgatcacagacgga
gccatggaggacttccagtccgtgttcgaggagttcaactggccagatcgcagggtgagg
gtcttcacctacctcatcggcagagagatgacatttgctgacaacaccaagtggatagcc
tgtaacaacaaaggttactacacacatgtctccacgctggcggacgtccaggagaacgtc
atggagtacctgcatgttctgagccggcccatggtcatcaaccacgaccatgacatcatc
tggactgaggcctacatggacacggtgctcttcaacaccaaggctcagagtctgttgctc
atgacctcggtggccatgcccgtcttcagcaagaagaaggagactctgtcccacgggatc
ctgctgggggtggtggggtcggacatccccctgctggaggtgatgaagctggcgcccaga
tacatgctgggtccccatggttacgccttcctggtcaccaacaacggctacatcctgtcc
caccctgaccttcgacctctgtataaagatgggaagaagctgaagcccaaacctaactac
aacagtgtggacctggcggaggtggagtgggaggacacgcaggagaccttgagaacagcc
atggtgaagggggagatgggaagcctcactttaaacatcagggcgtcggtagataaagag
aaaagacccttgttcttaatcaacaattatttctacaccaacatcgatgagactcctttc
agcttcggtatggtgttgacccaagggcacggtcagctgatggtcctggggaatgtgtcc
gtagaggagggactgcatgacctcacttcccctgacctgagcatcgctgcagagtggacg
tactgtgagacagacatcgaccctcatcaccgcaaatacacccagctgcaggccgccatt
cgctacctgcagggcaaggagcctgacctggagtgtgatgagttgcttctgcagcagact
ctctttgacgctgtggtaacggcgcccatggaagcttattggacagcactgctgcttgat
cctaacgggctggagccaggggtggaggcagccttcctggggacacgctctggtcttctc
agggtcctcagatacgccggggtggagaccagggtggccaagaagttcctgactccggtt
gacaaggccaacctgttcactctggaccacttccccctctggtaccggctggctgtggag
aaccggccaggccagttctactactacgtccccatggaggagaacaacaaagggggcggg
aagtttgttgttgctgttaccgcagtaactgtgacttctaaaggcaagaccgccattgct
ggagccgtcggggtgcagatgtccttggacatgctggagaggagactctgggccatcgct
aaacagcctgacggcactgattgcagtgatattgaaggggtctgtcctctcagctgtgaa
agtattgaccttaactgttacctggtcgacaacaatggcttcatcatggtgtctaaggag
agggcagaggtgggaaggttcttcggtgaagtggatgggtctgtgatggcttctctgatc
aagtctggcatgtacaagaaagtgtcgctgtttgattatcagggcatgtgcagaagcagt
caccatcatgccagcagcgcccgcccactactcagcccattctacggccttgcagcgatc
ctgaggtggcttttctctaacatgttgatgtttattctggacttcaacttttgtgggctg
tggcactcagattactttgtcgaagccaaggctggctaccacacaagccacaagcagaag
aaggtggatgccttgcagccctgtgacacagcataccctggctttatgtacgactactcc
atccgagagaccaacagcctcattaaatgtggacgctgtcagaagatgttcgtggtgcag
aaggtacctgacagtaacctgctgctgatggtggtccaggcggactgtgactgctcacgc
cagtactcagccatcctcctggagcccaaagagatcaaatataatgcttcagtcaagtgt
aacaggatgaagtctcaaaaggttcgacgccgccccgaatcctgccactcctaccatccc
aaggaaaatgccaaagactgtggcggggcctgtgagattaccctatcagccaccctgttc
ctggtctccctggcttgctcattggttctccacaggtggacgtga
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