Osmerus eperlanus (European smelt): 134020793
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Entry
134020793 CDS
T10927
Symbol
slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134020793 (slc6a13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oep02000
]
134020793 (slc6a13)
Transporters [BR:
oep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134020793 (slc6a13)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134020793
NCBI-ProteinID:
XP_062317022
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Position
5:complement(2460684..2477828)
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AA seq
623 aa
AA seq
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MKGRAGEMESLPKMDPGSNGHSRPLDIVPSADDKIQERGQWGNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFFIPYLIFLFACGIPVFFLETALGQFTSEGGITCWRKISPLFEGV
GYATQVIVALLNFYYIVVLAWAIFYLSHSFTWDLPWASCNNTWNTESCVEFQRRNDSINQ
AHYVNSTSPVIEFWERRVLRISSGIDHIGSLNWDLVLCLAIAWVICYFCIWKGVKSTGKV
VYFTATFPYAMLVILLIRGVTLPGASRGIEFYLYPDLGRLKDPQVWMDAGTQIFFSYAIC
LGCLTALGSYNKYNNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSFEQNVPISEVAES
GPGLAFIAYPRAVSMMPFSPLWACFFFIMIVLLGLDSQFVCVESLVTAMVDMYPSTFRRK
NRRELFILGVAIVSFLMGLIMLTEGGMYVFQLFDYYAASGMCLLFVAVFETVCIAWVYGA
DRFYDNIEDMIGYRPSPVIKYCWMFFTPATCFGTFAFSLIKYTPLKYNNEYEYPGWGYGL
GWVLAMSSMLCIPLWMIHKLWTTEGTLKERLQVLTTPSDDLPKTKREQKRLLAMFAADGD
GPRQRGAPTKDGYLPVSEKESNC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggacgagcaggcgagatggagagcctgcccaagatggacccgggctccaacgga
cacagccggcccctggacatcgtgcccagcgcggacgacaagatccaggagaggggccag
tgggggaacaaggtggagtttgttctctccgtggcgggagagatcatcggcctgggcaac
gtgtggcgcttcccgtacctgtgctacaagaacggaggaggggcgttcttcatcccctac
ctgatcttcctgttcgcctgtgggatccctgtgttcttcctggagacggcgttgggccag
ttcaccagcgagggaggaatcacctgctggaggaagatcagccctctgtttgaaggagtg
ggctatgccacccaggtgatcgtggcgctgttgaacttctattacatcgtggtgctggcc
tgggccatcttctacctgtctcactccttcacctgggatctgccctgggcctcctgcaac
aacacctggaacacagaatcttgtgtggagtttcagaggaggaatgattccatcaatcaa
gcccactatgtgaacagcacctctcctgtcatcgagttctgggaacggagggttctgcgt
atctcttccggcatcgatcacattggctctctgaactgggacctggttctgtgccttgcc
atcgcctgggtcatctgctacttctgcatctggaagggagtcaagtccactgggaaggtg
gtgtacttcacggcgaccttcccgtacgccatgctggtgatcctcctgatcagaggcgtg
actctgccaggggcgtccagggggatcgagttctacctgtaccctgacctgggcagactg
aaggacccacaggtgtggatggacgcagggactcagatcttcttctcctacgccatctgt
ctgggttgcctcaccgcactggggagctacaacaagtacaacaacaactgctacagggac
tgcatcgcgctgtgcttcctgaacagcgggaccagcttcgtggcgggctttgccatcttc
tctatcctgggcttcatgtcgtttgagcagaacgttcccatctcagaggtggccgagtct
ggacctggtttggccttcatagcctacccccgagcagtgtccatgatgcccttctcccct
ctatgggcctgcttcttcttcatcatgatcgtcctgctcggactcgatagccagtttgtg
tgtgtggagagcctggtgacagccatggtagacatgtatccttccaccttccgccgtaag
aaccgccgggaactcttcatcctgggtgtggccatcgtatccttcctcatgggcctcatc
atgctgactgagggtggcatgtatgtcttccagctctttgactactacgctgccagtgga
atgtgcctgctctttgtggctgtctttgagactgtttgcattgcttgggtttatggcgca
gaccgattttatgacaatatcgaagacatgataggctaccgtccgagtcctgtcatcaaa
tactgctggatgtttttcacgccggccacctgttttggaacctttgccttctccctgatc
aagtacacccctctgaagtacaataatgagtatgagtatcctggatggggctacgggctg
ggctgggtcctggctatgtcctccatgctgtgcatcccgctgtggatgatccacaaactg
tggactactgagggcaccttgaaagagcgtcttcaagtcctcaccacgccgtctgacgac
ttacccaaaaccaagcgggaacagaagaggctgctggccatgtttgctgctgacggggat
ggcccccggcagagaggagcccccaccaaggacggctacttgcccgtcagcgagaaggag
tcaaactgctag
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