Osmerus eperlanus (European smelt): 134020840
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Entry
134020840 CDS
T10927
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134020840 (ppfibp1b)
Membrane trafficking [BR:
oep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134020840 (ppfibp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
FlaF
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
134020840
NCBI-ProteinID:
XP_062317104
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All DBs
Position
5:complement(3371502..3393379)
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AA seq
973 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPFLGSLRALHLLEDLRGVLD
VMDTEEREGLRCQIPDATADSLAEWLQGHLSNGHMSMGQHTYQVRLSRLESDKESLVLQV
SVLTDQVEAQGEKIRDLDMCLDENREKLNATEEMLQQELLCRSTLENQKMDLIAEVSNLK
MKLNSLEKDSLDIDDRFRDSEDLVLEINELRYRVTEMENERLQYEKKLRSTKEELGVLRR
QLEERAGDLRRGQDQMGFRAPGGLGSTERVSHPDDTLKQRLKEKHVEVQRMKKAVESLMA
ANEEKDRKIEELRQSLLRYNKVQDMVMSLQAKKERTGDGEGEEALDGSISMAMARAVAME
LEREGLAGEEEVIGTSPDELESRLTVTEDPSPSPPARPASDPDRGPDPDPAGPDRSPDGT
RAGSQDNLDGRNREQRPETLLFLIKNKAREEVAKISDRPPKPPHSSPSSHSSPGSSPRAA
PTDDTGFGSRKSRSSFGRGFFKIRGGKRTASAPNLAETEREGTEHLDLAGLSQRSTTSDS
TRTLPTSPEGQKKTRGIKKLFGKLRRSQSTTFNLDDNLSEGEFRRGGVRATAGPRLGWSR
DLQRNNELDAPFARWSREQVCDWLQEQGLGLYLNMARSWISSGQTLLQASQHDLEKELGI
RHTLHRKKLQLALQALGSEEEDGKGRLDYSWVTRWLDDIGLPQYKTQFDEGRVDGRVLHY
MTVDDLLSLKVGSVLHHLSIKRAIQVLRLNSYEPNCLRRRPSDENNITPAEVSQWTNHRV
MEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFGL
LVGTEAQQSKQECLENPDYSLLTATAKVKPRKLTFGSFGRKRKQDENEEYVCPMDVEMPK
ERSFQKGFGVELQIYEDDFDRLDQMDDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISN
SPCLSLTDDDSNA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagatgccagcgacatgttggcagcagctctggagcagatggatgggattata
gcaggctccaaggctctggactactccaacgggctgtttgactgccagtcccccacctct
cccttcctgggcagtctgcgtgccctccacctgctggaggacctgcgtggggtgctggac
gtgatggacacggaggagagggaggggctacgctgccagatacctgacgccacggctgac
agcctggccgagtggctgcaggggcacctgtccaatgggcacatgtccatggggcaacac
acctaccaggtgcgtctgtctaggctggagagtgacaaggagtccctggtcctccaggtg
agcgtgctgacagaccaggtggaggcgcagggagagaagatcagggacctggacatgtgc
ttagacgaaaaccgggagaaactcaacgccacggaggagatgctccagcaggagctcctg
tgcaggtcaacgctggagaaccagaagatggacctcatagccgaggtgtccaacctcaag
atgaagctgaactccttggagaaggatagtctggacatcgatgaccggttcagggacagt
gaggacctggtcctggagatcaacgagctgagatacagagtgacagagatggagaacgaa
agactacagtatgagaaaaagctccgatctacaaaggaggagctgggtgtactgaggaga
cagctggaggagcgagccggagacctgaggaggggccaggatcagatgggcttcagagct
cctggaggtctgggcagcacagagagagtctcccacccagacgacactcttaaacagagg
ctgaaagagaaacatgtggaggtgcagagaatgaagaaggccgtggagtccctgatggcg
gccaacgaagagaaggatcggaagatcgaggaactgcggcagtctctcctgagatacaac
aaggtccaggacatggtgatgtccctgcaggccaagaaagagagaaccggagacggagag
ggcgaggaggcgctcgacggctccatctctatggcgatggcccgcgcggttgccatggag
ctggagcgggaggggctggcgggtgaggaggaagtgatcggaacgagcccagatgagctg
gagagccgcctgacagtgacggaagacccgtcgcccagccctccagccaggccagcctct
gacccagaccgggggccagacccggacccagcagggcccgacaggtcccctgacggcacc
agggccggtagccaggacaacctggatggcaggaacagagaacagaggcctgagactctg
ctgttcctaataaagaacaaggcccgcgaggaggtggctaagattagcgaccggcctccc
aagcccccccactcctccccctcctcccactcctcgccaggctcctccccccgcgccgcc
cccacagacgacacaggattcgggagccggaagtcccgctcctccttcggccggggcttc
ttcaagatccgggggggcaagaggacggccagcgcccccaacctggctgagacggagcgc
gagggcaccgaacatctggacctggcgggcctgtcccagaggtcgaccaccagcgacagc
acccgcacgctgcccacctcccccgaggggcagaagaagaccaggggcatcaagaagctg
tttgggaaactgaggaggagtcagtccacgaccttcaacctggacgacaacctatcggag
ggcgagttcaggaggggcggagtcagagccacagcaggccccagacttggctggtccagg
gatctgcagagaaacaatgagctggatgctccctttgcacggtggtcgagggagcaggtg
tgtgattggctgcaggagcagggcctgggcctgtacctgaacatggcacgctcctggatc
tcgtcaggccagacgctgctgcaggcctcccagcacgacctggagaaggagctgggaatc
aggcacaccctccacaggaagaagctgcagctggctctgcaggctctgggttccgaggaa
gaagacggcaagggccgactggactacagctgggtgacccggtggctggatgacatcggc
ctgcctcagtacaagacccagtttgacgagggcagggtggacggccgcgtgcttcactac
atgaccgtggacgacctgctgtccctgaaggtgggcagtgttctccaccacctgagcatc
aagagggccatccaggtgttgcggctcaacagctacgagcccaactgtcttcgacgcagg
ccttccgacgagaacaacatcacgccggccgaggtctcccagtggaccaaccaccgggtg
atggagtggctgaggtctgtggatctggccgagtacgctcccaacctgcggggcagcggc
gtgcacggggggctgatggtcctggagcccaggttcaacgtggagaccatggccctgctg
ctcaacattccccccaacaagacgctgctgcgccggcacctggccacgcacttcggcctg
ctggtgggcaccgaggcccagcagagcaaacaggagtgtctggagaacccagactactct
ctgctcaccgccaccgcaaaggtcaagccgaggaagctaacatttggtagcttcgggagg
aagaggaagcaggatgagaacgaggagtacgtgtgtccgatggacgtggagatgcccaag
gagcgcagcttccagaagggcttcggggtggagcttcaaatctacgaggacgacttcgac
cgcctcgatcagatggacgactcggagggcaccgtgaggcagatcggagccttctcagag
ggaatccaaaacctgactagcatgctgaaagatgacgagttcttcaaagagatctccaac
tctccctgcctcagcttgaccgatgatgactccaacgcatga
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