Osmerus eperlanus (European smelt): 134020919
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Entry
134020919 CDS
T10927
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134020919 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134020919 (nedd1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
134020919 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
134020919 (nedd1)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
134020919 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_NWD2_C
eIF2A
Cytochrom_D1
PROPPIN
SdiA-regulated
Beta-prop_Vps41
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
134020919
NCBI-ProteinID:
XP_062317243
LinkDB
All DBs
Position
5:complement(4453065..4461983)
Genome browser
AA seq
700 aa
AA seq
DB search
MEEVTRLVSSGDCVKIWDSASMTVLEQFNPHSATHPVAQVCWSSNNQYLVSASSLGDKLV
VSSLKSSAVPVLELGEGKKQTRVSLNSSSLYLVSGGLDNSVNIWDLKTNRLHRNLMDHKE
EVTSVTFNGSDSYVASGSTSGDIILHSVTTNLSSKPFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGTVVLWDSNTQKELHVFDGAHKAPASGLAFSPTNDLLFVTVGLDKKIICYDTSSKI
ILSSIRIESPLTAIDFTPDGTGLVVGSTQGRIYQYDLRNLSAPTKTAAAHKTSVTCLRFQ
SSYSRHLKSSKVVSSKTSSSKRISAKLGRLHGSAPPTITGVTTPTSAAASSVFPPNNGDR
GEGQVQGTGSSVEGLSREAEGHQSGDRLPSMDKFSSVGRNSLDIFSPVRDDYKALGRGDA
PGGIKGNGTSVDVFMRAGEGQHSTDTSQKTGRNSMDIFSPVRDDYKAQGMRTDSLSAKKD
FELDSQSSYSGGPPLRKTPLGTTGSRCYSPLTVFQTPPPIKEEEAPPQALTQRCDKTSGS
SLEGGCVAPPASAAAQTSYSQKVPPCFTPEPSLMRGSDLQAQLRYDTPVNGTSTTKAPDS
AAVASSLSTRITDTIGGEGGGAPLTSLQINFIRNMIHETLEDFRDTCHRDIVNLQVEMVR
QFYIQLNEIHGLIEKYSVNDSLVEEIEKLKEENKRLRANY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacacggctggtatcatcaggggactgtgtgaagatatgggattccgcc
tctatgaccgtgttggaacagttcaacccacatagcgccacacaccctgttgcccaggtg
tgctggagtagcaataatcagtaccttgtcagtgccagcagcctgggagataaactggtg
gtatcaagcctcaagagctctgctgtcccagtcttagaactcggagaagggaaaaagcag
acccgtgtgagcctgaactcctcctctctgtacctggtcagtggaggtctggataactcg
gtcaacatctgggatctgaagactaacaggctccatcgtaacctcatggatcataaggag
gaagtgacatccgtcactttcaacggcagtgacagttacgtagcttctggctccactagt
ggtgacatcattctgcacagtgtcaccaccaacctgtccagcaagccttttggccatggc
accaaccaacccatccacgatctgaagtactctgttgtgaagcgctccttgttgggaagt
gtgtcggacagtggcacagtagtgctgtgggactccaacacccagaaggagttgcatgtt
tttgacggagcccacaaggccccagcctctggcctggctttctcccccaccaacgacctg
ctgtttgtcactgtaggcctggacaaaaagatcatctgctatgacacctccagtaagatc
attctgagcagcatacggatcgagtctccactgacggcgattgacttcacgccagacgga
acagggctggtcgtgggctccacgcagggccgcatctaccagtatgacctgcgcaacctc
agtgctcccaccaaaacagccgccgcccacaagacatctgtcacctgcctgcgcttccag
agctcttacagtaggcatctcaagtcaagcaaagtagtttccagcaagacatccagcagc
aagaggatctctgccaagttgggcagactccatgggtccgcccctccgaccatcaccggt
gtgaccacacccacatctgcagccgcctcgtctgtatttccccccaacaatggagacagg
ggggagggccaggtgcaaggcacaggatccagtgtggaggggttgagtagggaggccgaa
ggtcaccaaagtggtgaccgcctgcccagcatggacaagtttagctctgtgggccgcaac
agcctggacatcttctcacccgttcgagatgactacaaagctctcgggagaggagatgct
ccaggaggaatcaaaggcaacggaaccagtgtggatgtgttcatgcgagcgggagagggg
cagcacagcaccgatacgtcccagaaaacgggaaggaacagcatggacatcttctccccc
gtcagggatgattacaaagctcaaggcatgaggactgattcactgagtgcaaaaaaagac
tttgaactggattcccaatcctcctattccggaggtcctccccttcgcaagacccctctg
ggcaccaccggcagtcgctgctacagccccctgaccgtcttccaaacccctccaccaatc
aaggaggaggaggcccctccccaggcattgacgcaaaggtgtgacaagaccagtggttcc
agtctggaggggggatgtgtggccccccctgcatcagcagcagcacagacctcatatagc
caaaaagtgccaccctgtttcaccccagagcccagcctaatgcggggcagcgatctgcag
gcccaactgagatatgacacgcctgtcaatggaacctcgaccactaaagcaccagactct
gctgcggtggcgtccagtctgtccacgcgcatcacggacaccataggtggcgaggggggc
ggagctccactcacatccctgcagatcaacttcatacgcaacatgatccacgaaaccctg
gaggacttcagggacacatgccaccgagacattgttaacctccaggtggaaatggtcaga
cagttctacatccagctgaatgagatccacggcctcatagagaagtactcggtcaacgac
tcgttggtggaggagattgagaagcttaaggaggagaacaagcgactcagggcaaactac
tga
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