Osmerus eperlanus (European smelt): 134021044
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Entry
134021044 CDS
T10927
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134021044
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134021044
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134021044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
134021044
NCBI-ProteinID:
XP_062317459
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Position
5:complement(6808361..6843892)
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AA seq
772 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKNLSKTSHDEAVEAFRNAKDPIVVQVLRRNPPGA
RGPPQEVLVVDVCTQTDITFEHIMALAKLRPTTPPVPDICPFLLSDSCHSLHTMEQEFYE
GTDYLSTLPVDGERTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDMAIYVSEVGPNSI
ADRDGRIREGDRILQINGQDVQDREEAVAMLSSEDCRNILLLVARPEMQLEEAWLDDEHS
EFLEQLKMEMLEEQQREEMELVALQEEQEHDQTKEEDELITDTATCSFLTQDKDRGGGLR
NRGPSSEHDVLAQIQRRLSQCLRDTHSQDTHILEEEEEEEETEGDRFQQLLELKCQIRNS
GEYDLFYSRRSTIECSLGEPVGVQHELRMLNDELRSIELECQNIMQAHKLRKGQGDQHQG
PQAGRPMPPSKDPLQGGVPQSRGKLVDIKERPEKSDKDSSSAYNTAESSRSTPLAMDRSP
EHSLQRRMVAITNQRNLRSTSRLAGGLSPSPSPSPSPSHQRTPVPGKSSSPDHSNPSESD
QTAQAEEGRMMVPSRGAQIPYLSPSHSSQHRQANGSIPAHARHYQSYMQLIQQRSAVEYA
QSQLSLLSVCTEPQRPANEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGG
MTTDDDAMSEMKMGRYWSKEERKQHLMRAKEQRRRREFMQRSRLESLRESPQSSSEGRKE
VSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKAPEGAKVHNAFLSVTTV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaaacgagaggaacactacaaactgctgtatgag
attgcccaggttaacggcaagaacctctccaagaccagccacgatgaggcagtggaggcc
ttccgtaacgccaaggaccccatcgtggtgcaagtcctcaggcgtaacccccctggtgcc
cgcgggccccctcaggaagtcctggtggtggacgtttgcacccagaccgacatcaccttc
gaacacatcatggcgctggccaagctccgccctaccacccctcccgtgcctgacatctgc
cccttcctcctctctgacagctgccactctctccacaccatggaacaggagttctatgag
gggacagactacctctccaccctgccagtggacggagagaggacggaggagtttgagtac
gaggaagtggagttgtgtcgcctcaacagccaggagaagctgggcctgactctgtgttac
cggacagacgaggaggaggacatggccatctatgtcagcgaggtcggtccgaacagtatc
gcagacagagacggtcgcatcagggaaggggaccgcatcttacagattaatggtcaggac
gtgcaggacagagaggaagctgtggccatgctttccagtgaggactgcaggaacatcctg
ctgttggtggccagacctgagatgcagctggaggaggcctggctggatgatgagcacagt
gagttcctggagcagttgaagatggagatgctggaggagcagcagagggaggagatggag
cttgtcgccctgcaggaggaacaggagcacgaccagacaaaagaggaggacgagctgata
acagacacagccacctgttcctttcttactcaggacaaggacagagggggggggcttagg
aacagaggcccaagctccgagcacgacgtcctggcccagattcagcgcaggctgtcccag
tgcctgagagacacgcacagccaggacacgcacatcctagaggaggaggaggaagaggag
gagacggagggcgaccgtttccagcagctgctggagctgaagtgtcagatccggaacagc
ggtgagtacgacctgttctacagccgccgcagtaccatcgagtgcagcctgggggagcca
gtgggcgtgcaacacgagctacgcatgctcaacgacgaactgcgcagcattgagctggag
tgccagaacatcatgcaggcccacaagcttcggaagggccagggtgaccagcaccaggga
ccccaggctggccggcccatgcccccctccaaggaccccctccaggggggtgtcccccaa
agcaggggcaagctggtggacatcaaggagcgtccggagaagtcggacaaggacagctcc
agtgcgtacaacaccgcggagagctcgcggagcactcccctggccatggaccgctccccg
gagcactcgctgcagaggaggatggtggccatcaccaaccagaggaacctgcgcagcacc
agccggctggcgggcggcctttcccccagcccaagccccagccccagcccttcccaccag
cgcacccccgtcccaggcaagagcagcagcccggaccacagcaacccctccgagtcggac
cagacggcccaggcggaggaggggaggatgatggtcccctccaggggcgcccagatcccc
tacctgtccccatcccacagctcccagcacaggcaggccaatggctccatcccagcccac
gcgcgccactaccagagctacatgcagctgatccagcagcgttcggccgtggagtacgcc
cagagccagctcagcctgctcagcgtctgcacggagccccagcggcccgccaacgagccc
aagatggagtggaaggtgaagatccgcagcgacggcacgcgctacatcaccaagaggccc
gtgagggacaagatcctccgcgagcgcgccctcaagatcaaggaggagcgcagcgggggg
atgaccacggacgacgacgcaatgagcgagatgaagatggggaggtactggagcaaggag
gagaggaagcagcatttgatgagagccaaggagcagaggaggaggagggagtttatgcag
aggagcaggttggagagcctgagggagagcccgcagagcagcagcgaaggacggaaggag
gtcagcatcatcgagctgagccacaagaagatgatgaagaaacgcaacaagaagatcctg
gacaactggatgactatacaagagctgatgacacacggggcaaaagcccccgagggcgct
aaggtccacaacgcctttctctcagtcactactgtataa
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