Osmerus eperlanus (European smelt): 134021118
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Entry
134021118 CDS
T10927
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03440
Homologous recombination
oep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134021118 (blm)
03460 Fanconi anemia pathway
134021118 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oep03032
]
134021118 (blm)
03400 DNA repair and recombination proteins [BR:
oep03400
]
134021118 (blm)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134021118 (blm)
DNA replication proteins [BR:
oep03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134021118 (blm)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
134021118 (blm)
Bloom's syndrome complex (BTR)
134021118 (blm)
FA (Fanconi anemia) pathway
134021118 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
Helicase_C
RecQ_Zn_bind
BDHCT
HRDC
RQC
ResIII
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
134021118
NCBI-ProteinID:
XP_062317601
LinkDB
All DBs
Position
5:complement(11424637..11432282)
Genome browser
AA seq
1458 aa
AA seq
DB search
MSCLPQNNLKEQLQKHSNAAQSRLSLAKPKPGAFCFRKKSSSGITKVEIPTKVNNSNVLA
YRSVNIPQNTAITKPPLVFSTKPNPPVVKINNHFLSSEYKSDSSTPVFSSHPLSKSVTTL
PASDGPALTKSDSSFTVSNGSKAAGLDGSFGFPVNAWDDLDDFETPVKGKKALPSPARTL
SSGKAPHRTNRTDEDIPGLVLDLEANSHAGKKDPPAGKELDTEGSEQPIAGIPDVCPRDT
QTQDEEKWAPEKDSPIQTAKRRPSAPSKSVLSDSEEEITAETSTARGIRTGHKKTWVDPD
IIDVDYKEPEDDLDYIPPSPQPEEHSPSIFSRRSVSRLQPAGSASTDISPVLTVRSVSSL
HSVSDAHPKERSVTNSKTDDQLFSIMESICSLVDSIPEHAIIGLSCGTELLLLRAHRKRI
LAKGSDTSVIKTQPDSTVILEPSDKEKPSFSLPTPSATSSCTCLPTDRGNPSKKPFSRTS
VISVDYNSTMFEDSDCLINEVQTPRTSWKPSTIADSYIRGEKGTPLIRHLSNTDSPSACV
LSTPCDLPTDVTIDDLDVPELFFSPKRPAAVQSRWESSASAVAASAPVETELDDFFNDNF
DIDDLNESDIPDYFDEAASSSTSRFNSRTVTSAVKEGGPTKLSWEKRPVTPAPTFKPAPK
ISSPESTYRNPAHDRFRGFNFPHASEMMKIFHKRFGLHQFRFNQLEAINAALLGEDTFIL
MPTGGGKSLCYQLPACVSPGVTIVISPLKSLIVDQVQKLTTLDIPATSLSGEKTDREAAN
IYMQLSKKDPIIKLLYATPEKVCASYRMISALENLYERGLLARFVIDEAHCVSQWGHDFR
PDYKRMHELRQKFPKVPIMALTATATPRVQKDILNQLQMSRPQLFTMSFNRTNLKYVVLP
KKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDTMAVSLQRAGIQALAYHAGLNDNDRE
YVQNKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISH
CVLFYSYTDVIRIKRIISMDKDGNRDTKATHFNNLHSMVHFCENVMDCRRIQLLAYFGEH
KFNPSFCKDHPDVICDNCAKPHQYKQRNMTEDVKKIVRFVQEHCEKVGCRYGRSSNQNRL
TLNMLVDIFHGKNTAKVQTGMFGMGAALSRHNADRLFKKLVLDNILLEDLFIGSNGQAIA
YISAGPKAMNVLNGQMQVEFFETESASSIRKHKASVAKSVSQREEMVQKCLQELTELCKK
LGKVFGIHYYNIFSFATLKKIAETLSADADVLLQIDGVTEDKLEKYGAEVIELLQRYSQW
KLPAAEDERGANPGNTDRWIDMTRDNEGDDDDDSGQSSYFSNTTGRGQKRKKAPAFNTSK
KRKAYSNQNYNSKSGYSRNKSWTSSSRGRGQSAGRGSTRPAASSPPSGPVGRRPGFMAIP
VPQTNARPFLKPAFSHLN
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtcttccgcaaaataacctgaaagagcagctccagaagcatagtaatgcagct
cagagcagactgtcgttagctaaaccaaagccgggagcattttgtttcagaaagaagtct
tcatcaggcatcactaaagtggaaatacccacaaaggtaaacaactcaaatgtcttggct
tacaggagtgtcaacatccctcaaaacactgcaataactaaacctcctttggtattttca
accaagcctaacccaccagttgtcaaaatcaacaaccactttctaagctctgaatacaag
tcggattccagcactcctgtgttcagctcacatcctctaagcaagtctgttacaacattg
cctgcgtctgatggacctgccttgacaaagtcggacagttcattcactgttagcaatggc
agcaaagccgcaggacttgacgggtcatttgggtttcctgtgaatgcttgggatgatttg
gatgacttcgaaacccctgtaaagggcaaaaaggctctaccaagcccagccagaaccctc
tcaagtggaaaggcaccacatagaacgaacagaacagatgaagacatcccaggacttgta
ctggacttggaagcaaacagccatgctgggaaaaaggatcctcctgctgggaaagagctc
gatacagagggctcagaacagcccattgcaggcatccctgatgtttgccctagagacaca
caaacccaggatgaagagaagtgggcaccggagaaggattcccctattcagacggctaag
agacggccctctgctccatccaagtcggttctgagtgacagtgaagaggaaatcactgct
gagaccagtacagccagaggaattcggacaggtcataagaaaacatgggttgacccagat
ataatagatgttgactataaggaaccagaagatgacttggattacatccctccatccccc
cagcctgaagagcacagtccttccattttttctaggagaagtgtctccagattgcaacct
gctggctcagccagtacagacataagccccgtcttaacagtgaggtctgtgtcaagcctg
cacagtgtctcagatgcccatcctaaagaaagaagtgtcactaattccaaaacagatgac
cagctcttcagcatcatggaatccatctgttctctggtggattccatccctgagcatgcc
ataataggcctgtcctgtggaacagagctgctactcctcagggctcacaggaaaaggatt
cttgccaagggaagtgacacgtctgtaatcaagacccagccagacagcaccgtgatcttg
gaacccagcgataaagagaagccttccttttcacttcccactcccagcgctacgtcctcc
tgcacctgtctgcccacagacagagggaacccctccaagaaaccatttagcaggacgtct
gtcatatcagtagactacaacagcaccatgttcgaggactctgactgcctcatcaatgaa
gtccagactcccagaacgtcatggaagcccagcaccatagccgattcatacatcagagga
gaaaaggggacaccgctaattagacacctcagtaacacggactccccatcagcctgtgtc
ctctcgacaccgtgtgacctgcctacagacgtaactattgatgacctggatgtccctgag
ctcttcttctctcctaagagaccagcagctgtccagagcagatgggagagcagtgcttca
gcagtggctgcctcggctccagtagagacagagctcgatgacttcttcaatgataacttt
gacatagatgacctgaacgagtcggacatccctgactactttgatgaagcggcaagctct
tcaacatctcggtttaactcccgcaccgtgacgtcagcagtcaaggagggaggacccact
aagttgagctgggagaagagaccagtcactccagctcctacctttaagcctgccccaaag
atctcctctccagagtctacatatagaaatcctgcccatgatcgcttccgagggttcaat
ttcccccacgcttcagagatgatgaagatcttccacaagcgatttggtcttcatcagttc
cgctttaatcagcttgaggctatcaatgctgctctgctgggagaggacacgttcattctg
atgcccactggtgggggtaagagcttgtgctaccagctgcctgcttgtgtgtccccaggg
gtcactatagtgatctccccattgaagtcactcattgtagaccaggttcaaaagctcacc
actctggatatcccggccacaagtttgtctggtgaaaagactgatagagaagctgccaac
atctacatgcagctgtccaagaaagaccccataatcaaactgctgtacgccactcctgag
aaggtgtgtgccagttacaggatgatcagcgccctggagaacctgtatgagcgaggcctc
ctggctcgctttgtcatcgacgaggctcactgcgtcagtcagtggggtcacgacttcagg
cctgactacaagcggatgcacgagctgaggcagaagttccccaaggtgcccatcatggcc
ctgactgccactgccaccccccgcgtccagaaggacatcctcaaccagctgcagatgagc
cggccccagttgttcactatgagcttcaaccggaccaacctcaagtacgttgtgctgccc
aaaaaacccaagaaggttgacgaagactgcatcggctggatcaagaagcattatccacga
gactcgggcatagtgtactgcctgtccaggaatgactgtgacaccatggcagtaagtctc
cagagggcagggatccaggcgctggcctatcacgcaggtctcaacgataacgacagagag
tacgtccagaacaaatggatcaaccaggacggatgccaggtgatatgtgccaccatagcc
ttcgggatgggcatcgacaaaccggacgtacgctacgtgatccatgccagtctgcctaag
tctgtggagggctactaccaggagtccggcagggcaggcagggacggggagatctcccac
tgcgtcctcttctactcctacactgacgtcatccgcatcaagagaatcatcagcatggat
aaagatggcaaccgagacacgaaagccacgcacttcaacaacctccacagcatggtgcat
ttctgtgaaaatgtgatggactgtaggaggattcagctgctggcttactttggagagcac
aaattcaaccccagcttctgcaaagaccacccagacgtcatctgcgacaactgtgcgaag
cctcatcaatacaaacagaggaacatgactgaggacgtgaagaagatcgtcaggtttgtc
caggagcactgtgagaaagtggggtgcagatacggcaggtcctccaaccaaaaccgactg
accctgaacatgctggtggacattttccatggtaagaatactgccaaggtgcagacaggg
atgtttggaatgggagcagccttgtccagacacaacgcagaccgtctgtttaagaagctg
gtgctggacaacatcctattggaagacctttttatcggcagcaacggccaggccatagct
tacatttctgctggaccgaaggccatgaatgtgctaaatggacagatgcaggtggagttc
tttgagacggagtcggcctccagcatcaggaaacacaaagcctccgtggccaagagcgtc
tctcagagagaggagatggtccagaagtgtctccaggagctcacagagctgtgcaagaag
ctgggcaaggtgttcggcattcattactacaacatcttctccttcgccactctgaagaag
atagccgagacgctgtcggcagacgcggacgtgctcctgcagatagacggcgtgacggag
gacaagctggagaagtacggggcagaggtcatcgagctgctgcagagatactcacagtgg
aagctgcccgcagcagaggacgagcggggcgccaacccagggaacactgacagatggata
gacatgacacgagacaacgagggcgatgacgacgacgacagcggccagtcgagctacttt
agcaacacaacaggcagaggacagaagagaaagaaagcgcccgcctttaatacatccaaa
aaaaggaaggcctacagcaaccaaaactacaattccaaaagtggctacagtcgcaacaaa
tcctggacgtccagttccaggggtcgtggccagtctgcaggcagaggctccaccaggccg
gctgcatcttcaccaccatcaggaccagtagggaggaggccaggcttcatggccatccct
gtacctcaaaccaacgctagaccttttctcaaaccagccttctcacacttgaactag
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integrated database retrieval system
