Osmerus eperlanus (European smelt): 134021171
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Entry
134021171 CDS
T10927
Name
(RefSeq) protocadherin beta-10 isoform X1
KO
K16505
cadherin-related family member 5
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134021171
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Cadherin related
134021171
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
134021171
NCBI-ProteinID:
XP_062317692
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Position
5:complement(13083852..13090134)
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AA seq
888 aa
AA seq
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MPRARLQLWRLPLLRLLASSLVLYVCLHRTSGMSGWGGCFEGQDVFATVRENSHMGQLVA
ELVVDTETANGIHWSLTGQNADWFFLEGINLRLNTSSEKVLDREAQGQILMAALTCYEDH
NVQNKYRIMVEILNENDNLPVFVNTTVQPLIISELTAVNTLVFSVLAVDADGDTIIYSID
QSSPDADYFKVDLPNSGTVMLVKPLDYETKTQLNVTIYATEMNTPEQFMTSITVTVDVTD
GDDQYPQFLPCTLLFQDQSSRICANPVYSVNVTEGEQDIVLDFSPGPIHAVDGDRSLSSP
LNYTILSGADNGRFLMDRVTGEVRLTRGVEDRLLTPTLRLRIMAYQRDDPRKYSVATVLI
RVLAVNRFPPQFDRAAYRGFVMEGNSPVSLVNTYGNTVLMLHVQDQDFSDGVNHRIQFFL
NPTSEHTQFYHVTQDGLLIARTNELMPSQKHMLEVVALDQESGETAQASILVQVLYDGQE
VPQGPLGEVGRMNACRLGKAVGLCCVLMSILMCILWAMMHLLRRHWGKSEPSDRGCVAQG
KHPNVSLRWFQVVSHRNPMPVRDEVIFHNEALTDCTSTFGLQGKQGIYFRNGPNGGLDPP
SKSNLPLPSLSPTLTNFSPALLDTMCAPLSCTPPFSSISSSPAHPSTSPPPSSAPSSPPL
QSPAPQNTSPPSPMSSPISIHRATPFHPYLPTLSTVTLLTSPQPPKDSVPPKVNSRVPSD
TPTEQDPPAQLPPLPPPRPPPVLTPPIVDDTGTPPPTPESTRTPESPALSINTPTHTAPP
PVQWRVTSPSPPETPSEVNCPPPCSEKTHTPREAGAGTGSPTGKQPACSHSGETPGSEKE
DEEDIQGDEDAEQNCLRNEDHDREDEELARALERLQPVFLTFRPGAKK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggctaggctgcagctatggaggctgcctctgttgaggctgctggcctcctct
ctggtgctatatgtctgcctacacagaacctcaggcatgtccggttggggaggatgtttt
gaaggccaggatgtgtttgcgaccgtcagagagaacagtcacatgggacagctcgtcgct
gagctagttgtagacacagagacagccaatgggattcactggagcctcaccgggcagaat
gctgattggttcttcctggagggcataaacctccgactcaacacatcatcagagaaggtc
ctggatagagaggcgcaggggcaaatccttatggcggcgctgacttgctatgaagatcac
aatgttcagaataaatataggatcatggtggagattctaaatgagaatgataatttgcct
gtgtttgtaaatactactgtccagccactcattatcagtgagctgacagctgtgaacaca
ttggtgttctctgtcctggctgttgatgcagatggagacaccatcatatactccattgac
caatcatcgcctgacgctgattacttcaaggtggacctccctaacagtgggactgtgatg
cttgtgaaacctctggactatgagaccaagacccagctgaacgtaaccatctacgcgacg
gagatgaacacaccagagcagttcatgaccagcattaccgtcaccgtcgacgtcacagac
ggagacgaccagtacccacaattcctgccctgcacgctactcttccaggaccaatccagt
cgcatctgcgccaaccctgtgtactctgtcaacgtaacagaaggagaacaggatattgtc
ctggacttctctcctggacctatccacgctgtagacggtgacagaagtctcagctctccg
ctcaactacaccatcctgtcaggggccgataatggccgttttctaatggatagagtgaca
ggggaagtcagactaactcggggagtggaagacagactcctcacaccaacactgcgtcta
cgaatcatggcataccagagggatgaccctcggaagtactcggttgccaccgtgctgatc
cgtgttctggcagtgaaccggttccctccgcagtttgaccgggccgcataccggggcttt
gtgatggagggcaacagccccgtctccctggtcaacacctacggcaacacggtgctgatg
ctgcacgtgcaggaccaggacttctcagacggagtcaatcacaggatacaattcttcttg
aatcccacatctgagcacactcagttctatcacgtcacacaagatgggcttttgatcgcc
cggaccaatgagctgatgccgtcgcagaaacacatgctagaggtagtggctttggatcag
gagtctggtgaaaccgcccaagcctctatactggtgcaggtgttgtacgatggacaagaa
gtacctcagggcccgctgggggaggtggggcgcatgaacgcctgtcgtttgggcaaagct
gtaggcctgtgttgtgtgctcatgagcatactgatgtgcatcctgtgggccatgatgcac
ctgctccggagacactgggggaagagcgagccctccgaccggggctgtgtggcccaggga
aaacaccccaacgtgagtttacggtggttccaggtggtgagccatcgcaatcccatgcct
gtccgcgatgaggttatcttccacaatgaggctctcaccgactgcacctccaccttcggc
ctccagggcaaacagggtatctacttcaggaatggccccaacggaggcctcgatcccccc
agcaagtctaacctgcctctccccagcctcagccccaccttgactaacttcagccctgca
ctgctcgataccatgtgtgcaccactcagctgcacccctccattttccagtatctcttcc
agccctgctcaccctagcaccagtcctcctccatcttctgccccctccagccctcctctt
cagtctcctgctccccaaaacaccagtcctccttcccctatgtcttcacccatctctatc
cacagagccacacctttccatccatacctccccactctttcaacagttactttactcact
tcaccccagccaccgaaagactcggttccacctaaggtcaactcaagggtgcccagtgat
acacccacagaacaggacccccccgctcaactcccacctctgcctcctccacgaccccca
ccggtgcttacaccccccatcgtcgatgacacaggcacacccccacccacccccgaatcc
acccgcacaccagagtcccccgcgttgtccattaatacacccacccacacggcacctccc
cccgtccaatggcgtgtcacctccccctctccacccgaaacaccgtccgaggtaaactgc
ccccctccttgctccgagaagacccacacgcccagggaggcgggagcgggcacagggagc
ccaactggaaagcagccagcttgctcgcactctggagagacccctggcagcgagaaagag
gatgaggaggacattcagggggatgaagatgcagagcagaactgtctgaggaacgaggat
catgacagggaggatgaagagctggcgagagccctcgaacgcctacagcccgtcttcctc
accttccgacctggcgcaaagaagtaa
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