Osmerus eperlanus (European smelt): 134021206
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Entry
134021206 CDS
T10927
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134021206 (ppfibp2b)
Membrane trafficking [BR:
oep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134021206 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
134021206
NCBI-ProteinID:
XP_062317768
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Position
5:complement(13959464..14019845)
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AA seq
1161 aa
AA seq
DB search
MESDASHMLEAALEQMDDIIAGSKAAAEYSNGLLDLGSPSSCISAGPLQVLQLAEELRLA
LELQASQEDRASLRAQVSSTTAHTLLLWLDNGEVNLRSPGNNETYQERLVRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLETSLEEHHHKLLSTEEMLQQELLSRTSLESQKLDLMDEVS
YLKLQLVNDEQNHQPACDVSHNKAECVVNLISDLQEEMCRFQEEINTRIQEKRALEEAQG
EMAARQAHDQSPDVGLGGSDTGLGAWDLDDCCRCGGEHGLLQELRQLKSKVDELEGEKTQ
YERKLKATKLSISYSLHVCYQSLMTKLSSLKLTVEHTQVEKQHWEERWRAAQAEISDLQQ
LLASKDTEIQSLQSQLLSRPSSSHDTSDKEEMYRQLLDKYQEFHRLKMGMESLLASNEEK
DRHIEELTVLLGQYRKMKEVLALTQGGERTLALTQGGERTLALTQGGERALALTQGGERT
LALTQGGERTLALTQGGERTLALTQGGERALALTQGGERALALTQAEERMLSGSSEEELS
RSLVLRVLTHKAHCDVIRTEMSSQGSSPLFVSPPSFQRELDSSCRSFQTSMEMSLVSPGD
GGYHSTAWSRPRMLSSSLEELQSGSLPKHEAEPVHLVPDSENLPQEMNKYQTLPGKLSRR
EVNGQREKYSPVQLSPVESDDNDYNLRRPEGLGEALLSDLSPLSSGMDSGQHSPVSPENR
KSTRGIRKLWGKIRRSQSGSMPGEAPDMGEFRRGGFRATAGPRLARAKDALSLLRDQKTP
FSRWTTDQVCDWLSESGLGQYVQLARHWVTSGQTLLSATPQDLEKELGIKNPLHRKKVQL
AVKSLSTRQAEKSSELDHVWVTRWLDDIGLPQYKDQFHESRVDGRVLQYLTVNDLLFLKV
TSQLHHLSIKCAIHVLHVNKFDPHCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAE
YAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLGTNFSSLVGSSAQLEKR
DYLEATGHSPLSTTAKVKPKKLGFSTLRRRKADDSTDYICPLESQAQANGSQRPYAGFRG
LSPILDRDPDRREQVVITEGTVLQIEALSDGINNLTVSRTLLNCHPTSQINQGGREEGRP
GAHTADSTRGRVILCIRETTL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagacgccagtcacatgttagaggcagccttggagcagatggatgacatcatc
gctggctccaaggcggcagcagagtactctaacgggctgctggatctgggctccccgtcc
tcgtgcatctcggcggggcccctgcaggtgctgcagctggccgaggagctgcgcctggcc
ctggagctgcaggccagccaggaggacagggccagcctccgggcccaggtctccagcacc
accgcccacacgctcctgctgtggctggacaacggagaggttaacctgcggtcgccaggc
aacaatgagacctatcaggaacgattggttcgtctagagggggacaaggagtctctggta
cttcaggtgagcgtgctgacagaccaggtggaggctcagggagagaagatcagagacctg
gagacgtctctggaggagcatcaccacaagctgctctctactgaggagatgctgcaacag
gagcttctgagcagaacgtcgttggagagccagaagttggacctgatggacgaggtgtcc
tacctgaagctgcagctggtgaacgacgagcagaaccaccagcctgcctgcgacgtcagc
cacaacaaggcagagtgtgtagtcaacctgattagtgacctccaggaggagatgtgtagg
tttcaggaggagatcaacactcgcatccaggagaagcgagccctcgaggaggctcagggg
gagatggcggcccgccaggcccacgaccagagccccgacgtgggcttggggggctcggac
acgggcctgggggcctgggacctggacgactgctgccgctgtggaggagagcatggcttg
ctgcaggagctccggcagctgaagagcaaagtggacgagctggagggagagaagacccag
tacgagaggaaactgaaggcgaccaagctgtctatctcctactctctccacgtgtgctac
cagtctctcatgaccaagctgtccagcctgaagctgacagtggagcacacacaggtagag
aagcagcactgggaggaacgatggcgggccgcacaggcagaaatatccgacctgcagcag
ctcctggcctccaaggacactgagattcagagtttacagagccagctgctgagcaggccc
tcgtccagccacgacacctcagacaaagaggagatgtacagacagctgcttgacaaatac
caagaattccataggttgaaaatggggatggaatctttgttagcatccaatgaagagaag
gaccgccacatagaggagctgaccgtgctactaggccagtacaggaagatgaaggaggtt
ctggctctgacccaggggggagagaggaccctggccctgacccaggggggagagaggacc
ctggccctgacccagggcggagagagggccctggccctgacccaggggggagagaggacc
ctggccctgacccaggggggagagaggaccctggccctgacccaggggggagagaggacc
ctggccctgacccagggcggagagagggccctggccctgacccaaggcggagagagggcc
ctggccctgacccaggcggaggagaggatgctgtctggcagcagcgaggaggaactgagc
aggagcctcgtgctgcgggtgctcacacacaaggcccactgtgacgtcatcaggacagag
atgtcctcccaaggttcgtctcctctcttcgtgtctccgccctccttccagagagagctg
gattccagctgtcgaagtttccagacctccatggagatgtccctggtttcccctggagat
ggaggctaccacagcacagcctggtcacggccacggatgctgtccagcagcttagaggag
ctacaaagcggctcgttaccaaagcatgaagctgaaccggtccatctcgtacccgactct
gagaatctcccccaggagatgaacaagtaccagactctcccagggaagctgtcgcgacgg
gaggtgaacggccagagggagaagtactcgcccgtccagctttctcctgtggagagcgac
gacaatgactacaacctgaggaggccagagggtctgggcgaggcgctgctgtccgacctg
tcccctctgtcttcggggatggactctggacagcactcccccgtctccccggagaacagg
aagagcactaggggcatcaggaagctgtgggggaagatccgccgtagccaatcaggaagc
atgccgggggaggcgccagacatgggggagttccgaaggggcgggttcagagccacagct
ggccccagattggcccgggccaaagatgcgctctctttgctgagagaccagaagacgccc
ttctctagatggacaactgaccaggtgtgtgattggctgtcagagtctgggcttggccaa
tacgtgcagctggctcgccactgggtcaccagcggacagaccctcctctccgccactcct
caggacctggagaaggagttgggcatcaagaaccctctccacaggaagaaggtgcagctg
gctgtcaagtctctgagcaccagacaggctgagaagtcgtccgagttggaccacgtctgg
gtcacgcgctggctggatgacatcggcctgccccagtacaaggaccagttccacgagagc
cgtgtggatggcagggtgctgcagtacctcaccgtgaatgacctgctgttcctgaaagtc
accagccagctccaccacctcagcatcaagtgtgccatccacgtcctccacgtcaacaag
ttcgacccccactgcctcaagcgcagaccgggggacgagaacaagacgtccccgtcggag
gtggtgcagtggtccaaccacagggtgatggagtggctgaggtctgtggacctggcggag
tacgcccccaacctgaggggcagcggcgtgcacggggggctcattatcttggagcctcgc
ttcaactcggacacgctggccatgctgctgaacatcccgccccagaagaccctgctgagg
aggcacctgggcaccaacttcagctccctggtgggctcctccgcccagctggagaagagg
gactacctggaggccacgggacacagccccctcagcaccacggccaaggtcaagcctaag
aagttggggttctcgacattgaggcggcggaaggcggacgactccaccgattacatctgc
cctctggagagccaggcccaggccaacggctcccagcggccctacgcaggcttccggggc
ctcagccccatcctggaccgtgacccggacaggcgggagcaggtggtgatcacagagggt
acagtgctgcagatagaagctctgtctgatggcatcaacaacctcaccgtgagtagaacc
cttctcaactgtcatcccacctctcagattaaccaggggggcagagaggagggcaggcct
ggagctcacacagcagatagtaccagaggaagagtcatactgtgtataagggagacgact
ctatag
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