Osmerus eperlanus (European smelt): 134021271
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Entry
134021271 CDS
T10927
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134021271 (lamb4)
04518 Integrin signaling
134021271 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134021271 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
EzrA
Motif
Other DBs
NCBI-GeneID:
134021271
NCBI-ProteinID:
XP_062317909
LinkDB
All DBs
Position
5:complement(15490857..15510204)
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AA seq
1792 aa
AA seq
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MTLNMRQTILFLFVLVAHVALTRGECEGSSCNPQLGDLMVGRAAQLSASSTCGLGGPQPY
CIIGYLEDEQKCFTCDSRQPYSLVTNPSSHQIENVITTFEPQRRMKWWQSENGIQEVSIQ
MNLETIFQFSHLVLTFKSFRPVAMLVERSKDYGRTWKVFRYFAEDCAASFPWVSAQLPDS
VDDVVCDGRYSGSQPSTDGEVVLKALDPSFDIEDPYAPHIQELITMTNLRVNFTRLFTLG
DTLLGRKRRNPQDKYYYALYDMVVRGSCFCNSHASLCMPVDITRGDVFNEPGMVHGRCVC
EHNTVGANCERCQDFHNDAPWRPGGQNGPNVCQRCNCHGHSESCYFDAARYQATGGVSGG
VCEDCRHDRVGPQCEQCRPYLYQDPQRSVEDPQGCIPCDCDPAGSLDGGLCDPVSGRCVC
KENVNGDRCDRCQYGFYGLNQEDPSGCQRCQCNFLGSVLTPHPCDQETGQCVCQQLATGA
LCDQCVSGHWGLGNTVYSCTPCNCDMGGAYSSICSSVDGQCQCLPNMVGQSCSDPAPGHF
LAPLDYFLFEAENAAPLEDQTSSSLLNPTGLPKCEQYYRDQGYDFKISNGRIVLVRRTKR
RARRRRQERRSIPLDPGSALQIVPRQRTADAPTTWTGPGFVRVLDGAGLRFTVDNLPASL
DYQLVIRYEPESLDDWVASVSILPLSPGDSGCTTDPTGTKTLSLPGVARVAIIDTPVCLN
NGGRYYIDITFAKQPNSDPHSSSHILVDSMGLVPKMASVQDFCSQSDLDSFRRLRCVELS
AGAQQLMLPEVCEGLIGSLSARIHNGAMVCRCNHQGSLGPYCSKFGGVCDCKANVIGRCC
DSCAPLTFGFGPEGCRPCECDTQGSVSELCDQVRGQCPCRREVSGRRCDRCQPGYYGFPL
CRPCQCNGQAELCHPDTGACLDCREHTAGDNCERCVEGYYGDPVSREPCEPCLCPDTEAS
GRHFASSCSKNPESRSLTCYCLPGHTGSRCDSCIPGFYGDLERPNAICQECPCNNNIYPE
DSSACDAVTGECMHCLHNTQGPRCQSCKPGYYGSAVDQDCKECSCDPRGTEVTQCPLGSP
CFCDSETGQCPCRTGAMGELCDECADGYWNIQGASGCQPCKCDPGNSLNNICDKVSGQCQ
CRAEFGGRQCDECGENHFGNPDLQCVSCDCNMEGTERPACDPFTGECLCRIGVAGIFCDE
CAPGYDSVFPSCAPCHPCVALWQDDVTDVHRAAQRMRTLIPRPGVHQQPAGTKRMLQMHS
SLESLANLTGRAMPQVQKVEKLIQMIKKLKDTIDPNAIIIDPTRLLDTQVDNIRHEFKKL
MDHLRDKLTTDPEINPEELEEALDEIMKLHKEYMADEKRVKAADKALEDSMDTRLKIKDK
LSSCNRSGNMGPLENKVKALSVAGLNGKICGEPGDMECSKSECGGALCRDALGLRECGGP
TCKGSVPVSANATEMAEQVENDIVNLLNKLRDSKAKLNTAKQMTQDTQDEAEKLKKKISD
TKEKFEKEKNDTKDLIRRVKNYLTDDMVAPEDIENLAEAVLAIQLPGTPDEIRDMIQNIR
DKLSKVKNFQENLEQLEGQAKTAKELLEKALEIKNRTKNIDVKDIKKAIYDAENAQDKAA
KDLEDAKDSKNMTQTQITEIETKLNETEAKLNTARLQDLPEEIEALKKKMEMNREQAKEA
KRAADKALADAKDAETGVQEVEDLFKELEEKNTNQDLEDIASTRLKNITMEAEKLRKDVA
DKMQNIEDLEGKILNFIKSKEDKANEVSMLLETVESLRKAIASRIDNYITCL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaacatgaggcagacaatcctcttcctgttcgtgttggtggcacatgtggcc
ttgacccggggggagtgtgagggcagctcctgtaacccccagctgggggacctgatggtg
ggccgggccgctcagctgtctgcctcctccacctgcggcctgggtggccctcagccctac
tgcatcattggatacctggaggatgagcagaagtgctttacatgtgactcccgccagccc
tacagccttgtcaccaaccccagcagccaccagatagagaacgtcatcaccacctttgag
ccgcagcgcaggatgaagtggtggcagtcggagaacggtattcaggaagtcagtattcag
atgaacctggagaccatttttcagttcagtcacctcgtcctgactttcaagagtttccgc
cctgtcgccatgttggttgaaaggtcaaaggactacgggcggacctggaaggtgttccgc
tactttgcggaggactgtgcagccagcttcccctgggtgtctgcccagctgcccgacagc
gtggacgatgtggtctgtgacggacgctactccgggtcgcaaccttccaccgacggggag
gttgtgctcaaggcgttggatcccagctttgatatagaggatccctacgctccccatatt
caagagctgatcaccatgactaacctgcgggtgaacttcacccgtttgtttacgctgggc
gacacgctgctgggacgcaagcgcaggaacccccaggataagtactactacgccctctat
gacatggtggtgcgtggcagctgcttctgcaatagccacgccagcctgtgtatgcctgtc
gacatcacccggggcgatgtcttcaacgagcctggcatggttcacggtcgatgtgtgtgc
gagcacaacacagtaggcgcaaactgtgagagatgtcaagacttccacaatgacgccccc
tggaggccaggtggtcaaaatggcccgaacgtctgtcaaaggtgtaactgtcatggtcac
tccgagtcgtgttacttcgacgcggcccgctaccaggccaccggcggggttagtggaggt
gtgtgtgaagactgtcgccatgaccgtgtaggaccccagtgtgagcagtgcagaccgtac
ctgtaccaggacccgcagcgctccgtagaagacccccaggggtgcattccttgtgactgt
gacccggccggctccctggacggcggcctgtgtgaccccgtatcggggcgctgtgtctgt
aaggagaacgtgaacggggaccgctgtgaccgttgtcaatacggcttctatggcctgaat
caggaagacccgtccggctgccagaggtgccagtgtaatttcctgggtagtgtcctgacg
ccacacccttgtgaccaggaaacggggcagtgtgtgtgtcaacagctcgccactggggcc
ttgtgtgatcagtgtgtgtcaggtcactggggtctgggaaacactgtatacagctgcaca
ccttgtaactgtgacatgggaggagcctacagcagcatttgttcatcagtagatggtcag
tgccagtgtttacccaacatggtggggcagagctgcagtgaccccgccccgggtcacttc
cttgctcctctggattacttcctgtttgaggctgagaatgctgctccactggaggatcag
acatcctcttccctgctgaaccctacaggcctgcccaaatgtgagcagtactaccgggac
cagggctacgacttcaaaatcagcaacggcaggatcgtcctggtgaggaggaccaagaga
cgagctcgcaggagaaggcaggaacggaggtccattcctcttgacccgggctcggctctg
cagattgtgccccgacagaggacggctgatgcgccaacaacatggactggcccgggattc
gtcagggttctggatggggcgggtcttaggtttacagttgacaacctcccagcctccctt
gactaccagctagtgattcgctatgagccagagtctctggatgactgggtagcttcagtc
agtatcctccccctgtcacctggagacagtggctgtaccactgaccccacaggaaccaaa
acactctcactacccggggttgccagagttgcgattatagatacaccggtgtgtttgaac
aatggaggaagatactacatcgacatcacctttgccaagcagcccaactccgatcctcat
tcaagctcacacatacttgtcgactcaatgggcctggtccccaagatggcgtctgtgcag
gacttctgttcccagagtgacctggactccttcaggcgtctccgctgcgtggagctgtcg
gcgggggcccagcagctgatgctgcctgaggtgtgcgagggcctcatcggaagcttgtcc
gcccgcatccacaacggggccatggtttgcaggtgtaaccaccaggggtcgctaggcccc
tactgcagcaagtttggtggggtgtgcgactgtaaggccaatgtgattggacgctgctgt
gactcctgcgcccccttgactttcggcttcggaccagagggctgcagaccatgtgagtgc
gacacccagggctcggtctcggagctgtgcgaccaggtcagaggtcagtgcccttgtcgg
cgggaggtgtcggggcgccgctgcgaccgttgccagccggggtactacggcttccccctg
tgtcggccctgtcagtgtaacgggcaggcggagctgtgccacccggacaccggagcctgt
ctggactgtcgggaacacaccgccggagacaactgtgaaaggtgtgtggagggttactac
ggtgacccggtctccagggaaccctgtgagccttgtctgtgtcccgacactgaggccagc
gggcgacactttgccagctcctgttccaagaacccggagtccagaagtctgacctgctac
tgcctgcctggacacacagggtcacgctgtgactcctgcatccccggtttctatggtgac
ctggaaaggccgaacgctatctgccaagagtgtccatgtaacaacaacatctacccagag
gacagcagtgcgtgtgacgccgtgacaggggagtgtatgcattgtctccacaacactcag
ggacctcgttgtcagagctgtaagcctggctactatggcagcgctgtggaccaggactgc
aaagagtgttcctgtgacccgcggggtaccgaggtgacccagtgcccgctgggaagcccc
tgtttctgtgactctgagacagggcagtgcccgtgccggactggagcgatgggcgagctg
tgtgacgagtgtgccgacggctactggaacatccagggggcatcagggtgccaaccttgc
aaatgcgaccctggaaactctctcaacaacatctgtgacaaggtgagcggtcagtgccag
tgtcgtgccgagttcggaggcagacagtgtgacgagtgtggggagaatcactttgggaac
cctgacctccaatgtgtctcctgtgactgtaacatggagggcaccgagcgtcccgcctgc
gaccccttcacgggggagtgcctgtgccgcatcggcgtggccgggatcttctgcgacgag
tgtgcgcccgggtacgactccgtgttcccctcctgtgccccttgccacccctgcgtcgcc
ctctggcaagacgacgtcaccgacgtccatcgggccgcccagcggatgcgcacgttgatc
cctcgcccgggagtgcaccagcagccggccgggaccaagcgcatgctgcagatgcactcc
tcgctagagtcgctggcgaacctgacgggacgagccatgccgcaggtgcagaaggtggag
aaactgattcagatgatcaagaagctgaaagacaccattgacccaaacgccatcatcatt
gacccaaccagactgttggacacccaggttgacaacatccgccacgagttcaaaaaatta
atggaccacttgagggacaagcttaccactgacccagaaattaatccagaggaattagaa
gaggcccttgatgagatcatgaaactccataaggaatacatggctgatgagaagcgggtg
aaggctgctgacaaggctctagaagactccatggacacgcggctgaagatcaaagacaaa
ctgtccagctgcaacaggagtggaaacatggggcctctggagaacaaggtcaaagccctg
agtgttgcagggctcaatggaaagatctgtggagaacccggcgacatggaatgttccaaa
tcagagtgcgggggtgctctgtgtcgagatgccctggggctccgggaatgtggaggtccc
acctgcaagggaagtgtccctgtgagcgcaaacgccacggaaatggccgagcaagtagag
aacgacatcgtaaacctcctcaacaaactgcgggactccaaggcaaagctcaacacagct
aaacagatgactcaggacacccaggatgaggcggagaaactgaagaaaaagatcagtgac
accaaggagaagtttgagaaagagaagaatgacactaaagaccttatcagacgtgtcaag
aactacctgacagatgacatggtggcaccagaagacattgagaacttagctgaggcagtg
ctagccattcagctgccaggcactccagatgaaatccgtgacatgatccagaacatccgg
gacaagctctccaaagtcaaaaacttccaggagaatctggaacagctggagggccaagcc
aaaaccgccaaagaactgctggagaaggccctggaaatcaagaacagaaccaagaatatt
gacgtgaaagacattaagaaagcgatttatgatgcagagaatgcccaggacaaggctgcc
aaagatctggaggacgccaaggacagcaagaacatgactcagactcagatcacagagatt
gagaccaaactgaatgagacagaggcgaagctaaataccgctcgacttcaggacttgcca
gaggagattgaagcgctgaaaaagaaaatggagatgaaccgcgaacaggcaaaagaggcc
aaacgagctgctgacaaagctcttgctgatgccaaagatgctgaaactggagttcaagaa
gtggaagacttgtttaaagaactggaggagaaaaacaccaaccaggaccttgaagatata
gccagtacacgtctgaagaatattacaatggaagcagagaaacttagaaaagatgttgca
gataaaatgcaaaacattgaagatttggaaggaaaaattctaaacttcatcaagagcaaa
gaggacaaagctaatgaggtttccatgttgctggagacggtggaatccctgcgcaaggcg
atagccagccggatagacaactacatcacctgtttataa
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integrated database retrieval system