Osmerus eperlanus (European smelt): 134021272
Help
Entry
134021272 CDS
T10927
Symbol
rpgrip1l
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
oep
Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134021272 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oep03037
]
134021272 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134021272 (rpgrip1l)
Cilium and associated proteins [BR:
oep03037
]
Primary cilia and associated proteins
MKS complex
134021272 (rpgrip1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
C2_C2CD3_N
Motif
Other DBs
NCBI-GeneID:
134021272
NCBI-ProteinID:
XP_062317910
LinkDB
All DBs
Position
5:15569711..15581073
Genome browser
AA seq
1310 aa
AA seq
DB search
MSTFADETAADVPVKDITLKLSQAGVGAPDSLVTQNVRDRQAISRVSREELEDKFLRLHE
ENLLLKQHSHKQEDKIKRMATKLVRLVKDRRRVEQGAPGVGGVRPQGGRDVELEEMMEEL
QEKVQDLQRQNDGLKQRLLAAKQQLQVQSRRPTPYGHVQSRINTGMRRQREDMHTQGPIP
SSRGLQSVEVEVSGRPPLGLLPRYGHSLLDDARAEIRNLENVIETQRGHIEEMDRAAEIL
REQLRRKEREFEESLLHLRQQQTTGQRSTIKDNVEMIRLQKQLVEKANAFTVLEGRFLQL
QENQRTLKASHDGVMAKVDELTGQLKDERLRSLGLEGQIQNLSFSQRRTDELQDRLHDLE
RERDLLKENCDKLVNSAFDVTQEQKWRTREQQLKLQIAQLEVALRSDLTDKNEILDKIKA
ERDANEKVTDENKRLQLQFLEQKEQLDEIKNRMKFYTKESEIDVAELSEALMLIKVRKTQ
RNGQLGFLEQVEDEMRGDADRSVRELQATHAETIQELEKTRNMLIIQHKINKDYQAEVEA
VTRKMDEAKAEYDQKLERLAQLLDMRAAKIKKLETQLKDIAYGTKAHVFKPDVDDDDLAD
VFDETVRLERGENLLEIHIGKGSFSAVALASLGDLEPSTFCTYAFFDFELQSTPVVKGER
PTYDFTSQYVVRVDDLFLQHLHSGSATLELQLARGMDFQTLAAGQLRLHSLLDKEGKVHG
SVQLVGVTGEVQAFGSVDYWARLRVPMEQAIRLYKERVKALGYLSSANAGDRQVSATALE
PHLTSADSSLNELSVTVRCCSGLASRLGAGKPSAYVIYKFFDFPDHDTCIVPDCGQPQFE
DHRSFPVPMDADLDGYLKTSALLLYVFDDQDSQSELYLGKARVPLLSLAHDKAITGTFEL
TDPAGLPSGHVDVTLKWKFTYLPPPGSTMTVEQARFIPKEPPVKLTPEGEEAEEKRAGTE
EAKEEKEKRVEKEKRKEGVVGTTVTAKEERRAKTLDPLPAATEGKVPQPKPRQRSFLKEN
MTSKKVSFVDVTAPENKLVTVSEAAVAGPSGSVDDKDDDDEEEESHFSEGQLISSSFQSL
SDESDISEEIFEQEGDVHAAPGAGEDQSESILSDSDDCIVPGQASVGRKPSERVRVEIVS
LSLRPDSRAASDSSVVRLFVEYSLLDLPSEETPMSLPKPLPGKSSHYNYSKMIHVDVENN
RTRREMLRGVLEGRNPEMENIRFTVVSEPPEEEEQERECEDVGVAYFSIPNILKQGQDMI
ETNLNIVDALDSSVVVGSLAVSVEGLEAFQSIMEDPDHDYTPISSLETDT
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttgctgatgaaacagcagcagacgtgcctgtgaaggacatcactttgaaa
cttagccaagctggagttggagcaccagattccttggtcacccagaatgtcagagataga
caggccatctcgcgtgtgtccagggaggagctggaggacaagttcctgcggctccacgag
gagaacctgcttctcaaacagcacagccacaagcaggaggacaagatcaagaggatggcc
accaagctggtgcggctggtgaaggaccggcggcgggtggagcagggtgcaccaggggtg
ggtggggtgcgtccacaggggggcagggacgtggagctggaggagatgatggaggagctc
caggagaaggtccaggatttgcagaggcagaacgatgggctgaaacaacgtctgctggcc
gccaaacaacagctgcaggtgcagagcaggagacccaccccttacggtcacgtccaatca
cgcatcaacacaggcatgaggaggcagagggaggacatgcacactcagggtcccataccg
tcctccagaggtctccagagcgtggaggtggaagtgagcgggaggcctccccttggtctg
ctaccccgatatggacacagtctgctggatgacgcgagagccgagattcgcaacctggag
aacgtgatcgagacccagcgtggccacatcgaggagatggaccgagcggccgagatactg
agagagcagctgaggaggaaggagagagagtttgaggagtccctccttcacctgagacaa
cagcagaccacgggacagaggtccactatcaaggacaacgtggagatgatcagactgcag
aagcagctggtggagaaggcgaacgccttcactgtgcttgagggccgcttcctccaactc
caggagaaccagaggaccctgaaggccagtcacgatggtgtcatggccaaggtggacgag
ctcactggccagctgaaggatgagagattgaggagtctggggctggaaggccaaatccag
aacctctcgttctcacagagaaggactgatgagctgcaagacagactacatgaccttgag
agggagagagacctgctgaaggagaactgtgacaaactggtgaacagtgccttcgacgtg
actcaggaacagaagtggaggacaagagaacagcagctcaaattgcagattgcacagcta
gaggtggcgctgaggtctgatctcacggacaaaaatgagattctggataagatcaaggct
gaacgagatgcgaacgaaaaagttacagacgaaaacaagaggcttcagctgcagttcctg
gagcagaaggagcagttggatgagataaaaaatcgaatgaagttctacaccaaggaaagt
gagatagacgtggcagaactcagtgaggcattgatgttaattaaggtaagaaagacccag
aggaacggccagctgggcttcctggagcaggtggaggatgagatgcgtggggacgcagac
cgctcggtgagagagctccaggccacacacgcagagaccatccaggaactggagaagacc
aggaacatgctcatcatccagcacaagatcaacaaggactaccaggctgaagtggaagct
gtgacacggaagatggacgaggcgaaagcggaatacgatcagaagttggaacgtctcgca
cagcttctggacatgagggctgcgaaaatcaagaaactagaaacccaactgaaggacatc
gcatacgggaccaaagcgcacgtcttcaaaccagacgtcgacgacgacgacttggccgac
gtgttcgacgaaaccgtccgcctggaacgcggggagaaccttctggaaatccacatcggc
aaggggtccttttcggccgtggcgctcgcgtctctcggcgaccttgagccctcgaccttc
tgcacctacgccttcttcgactttgagctccagtccactcccgttgtcaagggcgagcgg
ccgacgtacgatttcacgtcgcagtacgtggtgcgggtggacgacctcttcctgcagcat
ctccactcggggtcggccaccctggagctgcagctggccagggggatggacttccagacg
ttggctgcgggacagctccgcctgcactcgctcctggacaaggagggcaaggtgcatggg
tcagtgcagctggtcggtgtgacaggggaggtgcaagccttcggatcagtggactactgg
gcccggctgcgggtacccatggagcaggctatccgcctgtacaaagagcgagtgaaggcc
ctaggctatctcagttcagccaacgctggagacagacaggtgtccgccacagccctggaa
cctcacctgacttccgccgactccagcctgaacgagctcagcgtcaccgtgaggtgctgc
agcggcctggcgtcccggctcggcgccggcaaacccagcgcctacgtgatctacaagttc
tttgacttccccgaccacgacacgtgcatcgtcccagactgtggccagccccagtttgag
gaccacaggtcctttccggtgcccatggacgcagatctggacggctatctgaagacctcg
gccctgctgctctatgtttttgacgaccaggactctcagagtgagctgtacctgggcaag
gccagagtgcctttactgtcgctggcccacgataaagcaatcacaggtacctttgagctg
actgaccctgctggcctccccagcggccatgtcgacgtcactctcaagtggaagttcacc
tacctccctccccctggctccaccatgactgtggaacaggctcggttcatccccaaagag
ccccctgtgaagctcacacctgagggggaggaggccgaggagaagagggcaggcacagaa
gaagcaaaggaggaaaaggagaagagggtggagaaggagaaacgaaaggagggtgtggtg
gggacgacagtgacggcgaaagaggagaggagggctaagactctcgatcccctccctgct
gccactgaggggaaggtacctcaacccaaacccagacagagatcatttttgaaagaaaac
atgacttccaaaaaagtctcctttgtggatgttaccgctcctgaaaataaacttgttaca
gtgtcggaggcagcggtggcaggtccgagcggctccgtggatgacaaagatgatgatgat
gaagaggaggagtctcacttctccgaaggccagctgatctcatccagctttcagtctctt
tctgacgaatcagatatctcggaggagatctttgaacaggaaggcgacgtacatgcggcc
ccaggtgcgggcgaggatcagagtgaatcaatactctcagacagtgatgactgcatcgtt
ccaggacaggcctcggtgggaagaaagccctctgagcgtgtgcgtgtggagatcgtgtcc
ctgagcttgcgtcccgactcgcgggcagcctcggacagcagcgtggtgcgtctgtttgtg
gagtactccctcctggacttgccatccgaggagaccccaatgtccctgcccaaacccctg
cctggaaagagcagccactacaactacagcaagatgattcatgtagacgtagagaacaac
aggacgagacgggagatgttgaggggggtacttgagggacgtaacccagaaatggagaat
atccggtttacggtggtcagcgagccaccggaggaggaggagcaagagagggagtgtgag
gatgtaggcgtggcttattttagcattcctaacatcctgaagcaaggacaggacatgatt
gaaaccaacctcaacattgtggatgctctagacagcagtgtggtggttggcagtctggca
gtgtctgtggaaggactggaggctttccagtctatcatggaggacccagaccatgactac
acccccatctcctcactggaaacagacacatag
DBGET
integrated database retrieval system