Osmerus eperlanus (European smelt): 134021323
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Entry
134021323 CDS
T10927
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04115
p53 signaling pathway
oep04120
Ubiquitin mediated proteolysis
oep04137
Mitophagy - animal
oep04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134021323 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134021323 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134021323 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
134021323 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134021323 (siah1)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134021323 (siah1)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
134021323 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
134021323
NCBI-ProteinID:
XP_062317999
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All DBs
Position
5:17037796..17045131
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AA seq
315 aa
AA seq
DB search
MKVCPVPEFPLTEPSRTCLPAQPPEPVLLQSHEMSRQTATALPTGTSKCPPSQRVPTLSG
TTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAM
EKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPH
LMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFA
IVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLF
AENGNLGINVTISMC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgtgtccagttccagagtttccactgactgagccgagcaggacttgcctgcct
gcccaacccccagagcctgttctgctgcagagccatgaaatgagtcgccagaccgctacc
gccctgcccacaggaacctccaagtgccccccctcccagcgtgtgcccaccctgtcaggc
accacggcctccaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactat
gtgctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggccc
aaactcacctgctgccccacctgtcgagggccgctgggctccatccgcaacctggccatg
gagaaggtggctaactcggtcctgttcccctgcaagtacgcctcgtccggctgcgaggtg
acgctgccccacacggacaaggcggagcacgaggagctgtgcgagttccggccctactcc
tgcccgtgcccgggcgcctcgtgcaagtggcagggctccctggatgccgtcatgccccac
ctgatgcaccagcacaagtccatcaccaccctgcagggcgaggacatcgtgttcctggcc
acggacatcaacctgccgggcgccgtggactgggtgatgatgcagagctgcttcggcttc
cacttcatgctggtcctggagaagcaggagaagtacgacggccaccagcagttcttcgcc
atcgtgcagctcatcggcacgcgcaagcaggccgagaacttcgcctaccggctggagctc
aacggccaccgccgccggctcacctgggaggccacgccccgctccattcacgagggcatc
gccacggcgatcatgaacagcgactgtctggtgtttgacacgtccatcgcccagcttttt
gcggaaaacggcaatctgggtattaatgttaccatatcaatgtgctga
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