Osmerus eperlanus (European smelt): 134021326 Help Entry 134021326         CDS       T10927                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism oep  Osmerus eperlanus (European smelt) Pathway oep03040   Spliceosome Brite KEGG Orthology (KO) [BR:oep00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     134021326 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oep03021]     134021326 (sf3b3)    03041 Spliceosome [BR:oep03041]     134021326 (sf3b3)    03036 Chromosome and associated proteins [BR:oep03036]     134021326 (sf3b3) Transcription machinery [BR:oep03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      134021326 (sf3b3) Spliceosome [BR:oep03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     134021326 (sf3b3)  Complex B     134021326 (sf3b3)  Complex C    U2 SnRNP specific factors     134021326 (sf3b3) Chromosome and associated proteins [BR:oep03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      134021326 (sf3b3)     TFTC complex      134021326 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_EML Motif Other DBs NCBI-GeneID:  134021326 NCBI-ProteinID:  XP_062318004 LinkDB All DBs Position 5:complement(17064040..17080152) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKTLELLRPDANTGKVHTLLTMEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHSSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHLVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEAAFSVTVCRFASGG DDWYVLVGVARDMILNPRSVAGGFIYTYRLTGGGEKLEFMHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKRKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYKRNENQ LIIFADDTHPRWVTAACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctctacaacctcaccttgcaacgagccaccggcatcacgcacgccatccatggc aatttctcaggtaccaagatgcaggagattgttgtctcccggggaaagaccctggagctg ctgcgtccggacgccaacacggggaaggtccacacgctcctcaccatggaggtgttcggc atcatccgctctctcatggccttcaggctcacgggaggaactaaagactacattgtcgtg ggcagtgactcggggcgtatcgtgatcctggagtatcactcctcaaagaacatgtttgag aagatccaccaggagacctttgggaagagtggctgcaggcgcattgttcctgggcagttc ctggcggtcgaccccaagggcagggctgtcatgataggtgccattgagaagcagaagctg gtgtacatcctcaatagagatgcagccgcccgcctcactatctcttctcccctggaggcc cacaaggccaacaccctggtctaccacctcgtcggagtcgacgtgggttttgaaaacccc atgtttgcctgcctggagatggactatgaggaagctgacaacgatccaacaggtgaagca gctgccaacacccagcagaccctgaccttctacgagctggacctgggtcttaaccatgtg gtccgcaagtacagcgaggctctggaggagcatggaaacttcctcataacagttcctgga ggttctgatgggcctagtggggttctgatctgctcagaaaactacatcacctataaaaac tttggagaccagcctgacatccgctgccccatccccagacgcaggaatgacctggacgac ccagaacgagggatgatcttcgtgtgctcagccactcataagaccaagtccatgttcttc ttcctggctcaaacagagcaaggagacatcttcaaggtcaccctggagacagacgaggaa atggtaacagagatccgaatgaagtattttgacaccattcctgtggcaacagccatgtgt gtgctgaaaactggcttcctctttgtcgcctccgagttcggcaatcattacctgtaccag atagcccatctgggggatgatgatgaagagccagagttctcgtctgctatgccattggag gagggggataccttcttcttccagccccgcccacttaagaacctggttctggtggatgag caggagaacctgtcgcctataatgtcctgccagatagctgatctggccaatgaggacaca ccacagctgtatgtggcctgtgggcggggccccaagtccaccctcagagtgctccgacat ggactggaggtgtcagagatggctgtgtctgagctgcctggtaaccccaatgctgtctgg actgtacgcagacacatcgaagatgagtttgacgcctacatcatcgtgtctttcgtcaac gccacactggtgttgtccattggagagacggtagaggaagtgacggattctggcttcctg gggaccacgcccaccctctcctgctccctgctgggggaggacgccctcgtccaggtgtac cctgacggtatccgccatatccgcgcagacaagcgtgtgaatgagtggaagacccccggg aagaagacgatcgtccgctgtgccgtcaaccagaggcaggtggtcatcgccctcaccggg ggcgaactggtgtacttcgagatggacccgtcaggacagttgaatgagtacacggagagg aaggagatgtctgctgacgtggtgtgtatgagtctggccaacgtgcctcctggggagcag cgctcgcgcttcctcgccgtcggcctggtcgacaacaccgtccgcatcatctccctcgac ccctcggactgcctgcagcccctcagcatgcaggccctgcccgcccagccggagtctctg tgtatcgtggagatgggcggggtggagaagcaggacgagctgggggagaagggaaccatc ggcttcctctacctcaacataggactccagaacggcgtgctgctccgaaccgtcctggac ccggtcacaggagacctgtctgacacccgcacccgctacctggggtcacgacccgtcaag ctcttccgggtcaggatgcagggacaggaagctgtgctggccatgtccagccgctcctgg ctcagctactcctaccagtctcggttccacctcacgccgctgtcctacgagaccctggag tacgcttccggcttcgcctcggaacagtgccctgagggcatcgtggccatctccaccaac acacttaggatcctggcgttggagaagctgggtgccgtcttcaaccaggtggcgttcccc ctccagtacacgcccaggaagtttgtgatccacccagagaccaacaacctggtcctgatc gagacggaccacaacgcctacaccgaagccaccaaggcccagcgcaagcagcagatggcc gaggagatggtggaggctgcaggggaggatgagagagagctcgcggcagagatggcggcc gccttcctgaacgagaacctgcccgaggccatatttggagccccgaaggctgggtctggg cagtgggcctctctggtgcggctggtcaaccccatccagggcaccaccctcgacctggtc cagctggaacagaacgaagctgccttcagtgtcaccgtgtgtcgtttcgccagcggcggt gatgattggtacgttctggtgggcgtggccagagacatgatcctcaatccccgctctgtg gctggtggtttcatctacacctataggctgacagggggtggggaaaagctggagttcatg cacaagactcctgtggaggatgtccctctggcaatcgctcccttccagggccgggtgttg gtgggggtaggaaaactgctgcgaatctatgacctgggaaagagaaagctgctacgcaag tgtgaaaataagcacgtgcccaacctagtgactggcatccacaccatcgggcagcgtgtc atcgtgaccgatgtccaagagagcctcttctgggtccgctacaagcgcaacgagaaccag ctgatcatcttcgctgacgacacccacccccgctgggtgaccgccgcctgcctgctggac tacgacaccatggcctcagccgacaagttcggcaacatcagcattgtgcgtctgcccccc aacaccagtgacgatgtagatgaggaccccactgggaacaaggccttgtgggatagaggt cttctgaatggagcctcccagaaggcggaggtgatcatgaactaccacataggagagacc gtcctgtccctgcagaagaccaccctgatccctggggggtccgagtccctcgtctacacc accctgtctgggggcataggcattttggtgcccttcacctcacacgaggaccatgacttt ttccagcacctggagatgcacatgcgctccgagttccccccgctgtgcggtcgagaccac ctcagcttccgctcctactacttccccgtcaagaatgtgatcgatggagacctgtgtgag cagtttaactccatggaccctcacaagcagaagagtgtggccgaggagctcgacagaacc ccgcccgaggtgtccaagaagctggaggacatccgcactcgatacgccttctag

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