Osmerus eperlanus (European smelt): 134021336
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Entry
134021336 CDS
T10927
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oep03032
]
134021336 (zgc:173742)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
134021336 (zgc:173742)
DNA replication proteins [BR:
oep03032
]
Eukaryotic type
DNA Topoisomerases
134021336 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
RlaP
Motif
Other DBs
NCBI-GeneID:
134021336
NCBI-ProteinID:
XP_062318025
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All DBs
Position
5:complement(17159939..17176492)
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AA seq
738 aa
AA seq
DB search
MAKAKRGQKAKAKKPRQSSPSENEDGPTDASKRFNMAVKQEDGDFAPQQMGRKRKRQDVP
SASAMVQKKTTLKKEDGEVSSGTPRKRVKKEAEEKKIEEEEEGPTVSTKRKRTKKEIEEK
EEGNTVSTKRKRTKKEIEEKEEGNTVSTKQKRTKKEIEEARALKIKKKEEEEQQRWRWWE
EEKYEYGVKWKVLEHKGPWFPPEYQPLPKDVRFYYDGQEVNLSPAAEEVALFFAQMLDHE
YTTKEVFRNNFFKDWRKEMTHKERVLIQDLNKCDFGELHNMHKQKVEARKSITKEEKLVI
KEANQKIVEEYGFCLLDHHRERIGNFKIEPPSLFRGRGEHPKQGQLKKRIWPEDVIINCS
KESRIPEPPKGHHWKEVRHDNGVTWLASWTENIQGSVKYIMLNANSKLKGEKDWEKYEVA
RRLKSCVASIRQHYQEDLKSKQMATRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSL
RVEHLTLHDHLEGDDWVVEFDFLGKDCIRYYNKVPVTKKVFKNLKLFMENKQGGDDVFDR
LNTGLLNKHLSSLMPGLTAKVFRTYNASVTLQQQLRELSNMTNNQAEKMLSYNRANRAVA
ILCNHQRAPPKSFDQSMANLQTKIDARREQLVLAKTNLKEAKKEAKSSSDPKLQTVVERK
KKAVERCEEQLLRMEVQATDREENKQIALGTSKLNYLDPRISVAWCKNMEVPLDKIYNKS
QRDKFAWAVDMTERDFQF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaagcggggccaaaaggccaaagctaaaaagcccagacagagctcgccg
agtgagaacgaagatggccccaccgatgcatccaaaaggttcaacatggctgtgaagcag
gaggatggagactttgctccccagcagatggggaggaagaggaagaggcaggacgtgccg
tctgcctctgccatggttcagaaaaagacgacattaaaaaaggaggatggtgaggtaagc
tcggggacaccaaggaagagggtcaagaaggaggctgaagagaagaagattgaggaggaa
gaagaggggcccactgtctctaccaagcggaagaggaccaagaaagagattgaggagaag
gaagaggggaacaccgtctctaccaagcggaagaggaccaagaaagagattgaggagaag
gaagaggggaacacagtctctaccaagcagaagaggaccaagaaagagattgaggaggcg
cgagctctgaagattaagaagaaggaggaagaggagcagcaacgttggagatggtgggag
gaggagaaatatgagtacggggtaaagtggaaggttctagaacataaaggaccgtggttc
cctcctgagtaccagcccctgcctaaggatgttcgtttttactacgacggtcaggaggtg
aacctgagccctgcagccgaggaggtggctctgttcttcgcccagatgctggaccacgag
tacaccactaaagaggtgttccgaaacaacttcttcaaggactggagaaaggaaatgacc
cacaaggagcgtgtactgatccaggacctgaataagtgtgacttcggggaactccacaac
atgcataagcaaaaggtggaggccaggaagagcattaccaaggaagagaaactggtgatc
aaagaagccaaccagaagatcgtggaggagtacggcttctgcctgctcgaccaccacaga
gagcgcatcggcaacttcaagattgagcccccgagcctcttcagggggcgtggggagcac
cccaagcagggccagctcaagaagaggatctggcccgaagacgtcatcatcaactgcagc
aaagaatctcgcatcccagagcccccaaaaggtcaccactggaaggaggttcgccatgac
aacggggtgacgtggctggccagctggacagagaacattcagggctccgttaaatacatc
atgctcaacgccaactccaaactcaagggggagaaggactgggagaagtacgaggtggcc
cggagactgaagagctgtgtggctagcattcgccagcactaccaggaagacctcaagtcc
aaacagatggccacccgccagagagccgtggccctctacttcatcgacaagctggctctg
agagcgggtaatgagaaggaggaaggagagacggctgacacggtaggctgctgttctctc
cgggtggaacacctcaccctccacgaccacctggagggggatgactgggtggtggagttt
gacttcctgggtaaagattgtatccgctactacaacaaggtcccagtcaccaagaaggtg
tttaaaaacttgaagctgttcatggaaaataagcagggaggtgacgatgtcttcgaccgc
ctcaatacaggcttgttgaacaagcacttgagttccctgatgccaggcctgactgccaag
gtgttcaggacatacaacgcctcagtcaccctgcaacagcagctcagagagctctccaac
atgacaaacaaccaggcagagaagatgctctcctacaacagagccaaccgtgcagtcgca
atactctgcaaccaccagcgggcaccgccaaagagcttcgaccagtccatggccaaccta
cagactaagattgatgccaggagggagcagctggtcctggccaagactaatctgaaggag
gccaagaaggaggccaagtccagctcagaccccaagttgcagacggtggtggagcgcaag
aagaaggctgtggagcgctgtgaagagcagctgttgaggatggaggtgcaggcgacagac
agggaggagaacaagcagatcgctctgggcacctccaaactcaactacctggacccacgc
atcagtgtggcctggtgtaagaacatggaggtccccctggacaagatttacaacaagtct
cagagagacaagtttgcctgggccgtagacatgaccgagagagacttccagttttaa
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