Osmerus eperlanus (European smelt): 134021376
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Entry
134021376 CDS
T10927
Symbol
acanb
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
Proteoglycans [BR:
oep00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
134021376 (acanb)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
134021376 (acanb)
Lectins [BR:
oep04091
]
C-Type lectins
Lecticans
134021376 (acanb)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134021376
NCBI-ProteinID:
XP_062318103
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Position
5:complement(17852072..17864058)
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AA seq
1328 aa
AA seq
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MVILPFLCVCLPFITATISFENPEDLDGTLSVSIPEEVPLLPLLGGKVVVPCYFQDNTVN
DPGAPTLAPLSHRIKWTHVTKDKVTLILVASEGKVHVETEYLDRVTMVNYPLVATDATME
LTELRATDSGSYRCEVMHGIEDSYDSVDVTVQGIVFHYRAISTRYTLTFEKAKAACIQNS
ATIATPAQLQAAFDDGYHQCDAGWLSDQTVRYPIHEPREGCFGDKEDFPGVRTYGVRDVN
ETYDVYCFAEKMSGRVFYSMSVEKFTFYQAGDQCAKLGASLATTGQLYLAWKAGMDVCNA
GWLADRSVRYPINIARPQCGGGLLGVRTVYLYPNQTGYPYPDSRYDAVCFRESEDNAILT
TPFPDIITMTPSPVDFPARSTTPDGEARGEVATQAPTDTSTLEQPLPIPPSVIDTFTKVT
PVIEQEVSMATVRPDLGQELPRENDTAMAPTGVVFHYRAGSSRYALSFVEGQLACQSVGA
IIASPQQLQAAYKDGLHHCDAGWLRDQTVRYPIVSPRDKCSGNLEHLPGVRSYGLRPSDE
RYDVYCYVERLRGEVFYTSDYDSFSYDEAVSHCQKLNATLASTGELYAAWKQGLDKCRPG
WLADRTVRYPIRQPKAHCGGGKAGVHTIYAYPNQTGHPDQHSRYDAYCFRAERRVLHNET
SVNETLVVVDEEKINMTTSIEQLTPVIPIVPPVSVDLSGSGSAEQSASGSGSSSDSGSGS
GAGGPSGDSFGGFETSGEGSGSGIHITLSGDHLSGEASGSEGPQEGSSVIYNTKVDSGDW
ESSVGEEEKPGFSGFPSGVGPHSFSGSGDLSGDLSGSGESTIIMVDGETVDLSTKQQPTQ
QELGRGSVDLSGSGGMSGSGTSGFFSGSGIPVISFVTPTLVDQTTKASGEQEVSGFHHMG
SGFPSGSGDPSGYTSGTPSEDVSPPRGDVVFLPEDGMMEVNVQPSDRRPEQGRGQVDLSG
DGSGPGFYEVSSTWDHHASANGELSRRDPTAEGMSVVLPPGSTFPSPEYITNQENLVHLE
EKLPQLDLEGLAGPTEEIYVTSPSSTYSSPTTAPAVSQVTPAVVQQPATEDASPDPCEPN
PCGAGTCSVQGDIAVCQCPHGFTGEDCKTPTQGCAEGWVEFMGSCYLHFSERDTWGVAEH
RCQELNSHLVSITSQQEQNFVNSNAQDYQWIGLNDKDVQNEFRWTDGSPLQFENWRPNQP
DNYFDSAEDCVVMIWHEEGQWNDVPCNYHLPFTCKSGPAMCSWPPEVENAKPMGDRRDRY
PVNSIVRYQCDSGFTQRHLPVVRCLPDSRWEEPQVECIGPGTTSNRLHKRSIRRRSKAVS
SQSWRKLL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcttaccttttctgtgtgtgtgtcttcccttcatcactgcaacaatatccttt
gagaaccctgaggatcttgatggcacgttgagtgttagcatccctgaggaggtgccgctg
ctccctcttctgggcggcaaagtggtggtgccctgctacttccaggacaacacggtcaac
gaccctggcgctccaaccctcgcccccctctctcaccgcatcaagtggactcatgtcacc
aaggacaaggtcaccctcatcctggtggcgtcggaagggaaagttcacgttgagacggag
tatctggaccgggtcacaatggtgaactatccactggtggcgaccgatgccaccatggag
ttgacagagctgcgtgccactgactcaggcagttaccgctgtgaggtcatgcatggcatt
gaggatagctacgactctgtggacgtcactgttcaaggtattgtgttccactaccgagcc
atttctactcgttacaccctgacctttgagaaggccaaggctgcatgtatccagaacagt
gccaccattgccacacctgcccagctccaggccgccttcgacgatggttatcaccagtgt
gatgccggctggctctctgatcaaactgtcaggtaccctatccacgaaccaagagagggt
tgttttggagacaaagaggacttcccaggtgtgagaacctacggagtgagagacgtcaac
gagacatatgacgtgtattgtttcgccgagaagatgtcaggcagagtgttctactccatg
tcagtggaaaagttcaccttctaccaggctggcgaccagtgtgccaaacttggtgccagt
ctcgccaccacaggccagctctacctggcatggaaggctggcatggacgtatgtaatgca
ggctggctggcagacaggagtgttcgctaccccatcaacatcgccaggccccaatgtgga
ggaggcctgctaggagtgaggacagtctacctgtaccccaaccagacaggctatccttac
ccagactcacgctatgatgcggtctgcttccgagaatcagaagacaatgcaatcctgacg
acacccttccccgacatcatcaccatgactccaagccctgtggacttcccggcacgttcc
acaacacctgatggggaggcacggggagaggtggccacccaggccccaactgacaccagc
acattggaacaacctctccccatcccccccagtgtcatcgatacttttacaaaggtgacg
ccagtgatagaacaggaggtcagcatggccacagtcagaccagacctgggacaggaactt
ccacgtgagaatgatactgccatggctcccacaggtgtggtgttccactacagggcaggc
tcaagccgttatgctctgtctttcgttgagggccagctggcctgtcaaagtgtgggggct
atcatcgccagcccccagcaactccaggcagcctacaaggatggcctacaccactgtgat
gctggctggctcagagaccaaactgtcaggtaccctattgtgtcgcccagagataagtgt
tcaggtaacctggagcatctccctggagtgagatcgtacggcctaaggccttctgatgag
cgatatgatgtctattgctatgttgagcgcctcaggggtgaggttttctacacaagtgat
tatgatagcttctcctacgacgaggcagtgtctcactgtcagaaacttaatgccaccttg
gcatccaccggcgaactctatgctgcctggaagcagggcctggacaagtgtcgtcctggc
tggctggctgaccgcactgtccgctaccctatccgccaacccaaggcccactgtggagga
ggcaaggctggggtacacaccatctatgcctaccccaaccagacaggccatccagaccag
cactccagatacgacgcctactgcttcagagctgagcgcagagtacttcacaatgaaacc
agtgtcaatgagactctagtagtggtggatgaggaaaaaatcaacatgacgacgagtatt
gaacaattgacacctgtcattcctattgtacctccagtctctgttgacctgtctggctca
ggctcagcagagcagtcagccagtggcagtggcagtagcagtgacagtggcagtgggagt
ggagctggtggtcctagtggggattcatttgggggttttgagaccagtggggaaggatct
ggctcaggcatccacatcactctcagcggcgaccacctgtctggagaggcctctggttct
gaggggccccaggaggggagctccgtcatctacaacacaaaggtagactctggggactgg
gagtctagtgttggggaagaggagaaacctgggttcagtgggttcccctccggtgtgggt
ccccattcttttagtggcagtggtgacctcagtggtgacctcagtggtagcggagagtcc
acaatcatcatggtggatggggagacggtcgacctttctactaagcaacagcccacccag
caagaattgggaagagggagcgtggacctgagtggatcagggggcatgtctggctcaggg
accagcggcttcttcagtggctctgggatcccagtcatatcctttgttacccccactctc
gtcgaccagacgaccaaagcatcaggcgagcaggaagtatctggtttccatcacatgggt
tctggttttccgagtggatctggggatccatctggctacacttcagggaccccctctgaa
gatgtttccccaccccgaggggatgttgtcttcctgccggaggatgggatgatggaggta
aatgtgcagccttctgatcgtcgtccagaacagggacgtgggcaggtggacctcagtggt
gatggtagtggtccagggttctacgaagtgagtagtacttgggatcaccatgcttcagcc
aatggggagctttcccggagagatcctacagccgaaggaatgtctgttgtcctgccccca
ggttctacattcccttctccagaatatattaccaaccaagagaacttagttcatttagag
gaaaagctaccacagctagatcttgaaggcctggctgggcccacggaggagatttatgtc
acttctccctcatccacttactccagtcctaccaccgcacctgctgtctcacaagtgaca
cctgctgttgtgcagcaacctgccactgaggacgcatctcctgacccctgtgaacctaat
ccgtgtggagctggtacctgttctgtgcagggtgatattgcagtctgtcagtgtccacat
ggatttactggagaagactgcaagacaccaacgcagggctgtgcagaaggctgggtggaa
ttcatgggaagctgctaccttcacttttctgagagggacacctggggtgtagctgagcat
cgctgccaagagctcaactctcatctggtcagcatcacttcgcaacaggagcaaaacttt
gtcaactctaatgcccaggattaccagtggattggactaaatgataaggacgtgcagaat
gagtttcgctggacagacgggagtcccctgcaatttgagaactggaggccaaaccaacct
gataactactttgactcagcggaggactgtgtggtaatgatctggcatgaagaaggccag
tggaatgatgtaccctgcaactaccacctgcccttcacctgcaagagtggacctgccatg
tgctcttggcctcctgaggtagaaaatgccaaacctatgggcgatagaagagaccgttac
ccagtcaactccatagtccgctatcagtgtgactctggcttcacacagcgccatctacct
gttgtacgctgcctgcctgacagccggtgggaggagccacaagtggagtgtataggacct
ggcaccacaagcaacagactacacaagcggtccatcaggaggcggtctaaagcggtcagc
agtcaatcatggaggaagctcctttaa
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