KEGG   Osmerus eperlanus (European smelt): 134021455
Entry
134021455         CDS       T10927                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134021455 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oep03019]
    134021455 (rae1)
   03036 Chromosome and associated proteins [BR:oep03036]
    134021455 (rae1)
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     134021455 (rae1)
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134021455 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 eIF2A Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_ACSF4 ExoI_SH3 Beta-prop_SPT8 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 134021455
NCBI-ProteinID: XP_062318302
LinkDB
Position
1:complement(14801148..14805803)
AA seq 369 aa
MSLFGTTTGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLTFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttatttgggacaaccaccggttttggtactggaggaaccggtgtctttggaagt
acaacaacagacagccacaatcccatgaaggatgttgaggtgacttcgccacccgatgac
agtatcagctgtctgacttttagcccacccacaatgccaggaaactttttaattggtgga
tcctgggccaatgatgtgaggtgctgggaggttcaagacaacgggcaaactgtgcccaaa
gcccaacaaatgcacactggcccagtgctggatgtctgctggagtgatgatgggagcaaa
gtattcactgcctcatgtgacaagacagccaagatgtgggacctaaacagtaaccaggcc
atgcagattgcgcagcatgatggtcccatcaggacaatacactggatcaaagcccctaac
tacagctgtattatgacgggcagctgggacaaaacactgaagttctgggacacacgctcc
cccaaccctatgatgtctctgcagatgccagagagatgctattgtgctgatgtggtgtac
cccatggcagtggtggccacggcagagagaggtctgatagtttaccagctggagaaccag
ccctcagagttccgcaggatagactccccactgaaacaccagcatcgatgtgtggcaatc
ttcaaagacaagcagaacaagcccacaggctttgccctgggaagcattgagggtcgagtg
gccatccactacattaaccccccaaacccggctaaggacaacttcaccttcaagtgccac
aggtccaatggaaccaacactgccacaccacaggatatatatgctgtgaatgccatctcc
ttccaccctgtccatggcacactgtccactgttggctctgatggacgattcagcttctgg
gacaaagacgcccgcaccaaactcaagacttctgagcagcttgaccagccaatcacagcc
tgctgcttcaacaacaatggcaacatctttgcctatgcttccagctatgattggtcaaag
ggacatgagtattacaacccccagaagaagaactatatcttcctacggaacgctgctgag
gaactgaagcctcggaacaagaaatggtga

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