Osmerus eperlanus (European smelt): 134021462
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Entry
134021462 CDS
T10927
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04371
Apelin signaling pathway
oep04514
Cell adhesion molecules
oep04520
Adherens junction
oep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
134021462
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134021462
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134021462
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134021462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134021462
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134021462
04090 CD molecules [BR:
oep04090
]
134021462
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134021462
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Major cadherins
134021462
CD molecules [BR:
oep04090
]
Proteins
134021462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
134021462
NCBI-ProteinID:
XP_062318314
LinkDB
All DBs
Position
5:complement(19053744..19059702)
Genome browser
AA seq
815 aa
AA seq
DB search
MLQLTSPLCGLTLLVLQHACTVHVSGLFQVAIPAGLVEEPHPLGCHRNQSGEVDTIPDPA
QYRQGEFSSALPLLTIRQPLPAQRRKKRAWVMPPINIAENGRGPFPNQMFKIRSSYNDEV
KMYYKITGPGADLPPIGRFIIERNTGWLSVTEPLDREQQAQYIIEAQAEARGFGIEENPM
EIVINVLDQNDNKPEFTQNPFLGHVPEDAEIGSEFMKVNATDRDQPGQISSDLRYSIRRQ
DPPTPSDLFFINPITGGILVAASGLDRERQQQFKLVVEAADNAGAGLTSTSQVLITVEDS
NDNAPKFTQDTYTGSISENQQGVVVVKIEVRDEDQIHTPCWRSRFRIIQGDSDHLFSIST
GHSGDQGILATSKELDYEASAVYTLLVVVENEVVFSRPVSTSTATVTVRVEDRNEAPVFR
PSEMVVSVSEDLPLDSDLVLYTASDPDLDMKQTVKYQLERDHAGWLSLNESTGLLVVRSS
LDRESPFIIDGTYTVLILAIDNAETPATGTGTLVIEVEDVNDNIPSVDQRHLVFCSSQSQ
ALELPIRDPDGPGFSQPFTAQLLEDSLKHWDIHMNDSKTAILLSARTVLRLGEHEVNLRV
SDSAGLYQDISLQAQVCDCTGSDLICLEKSIAVGMSETMWILGGVLALLLLLLLLLLFLR
KSGSGEKAVLLQEEESPVRGNIYCYDEEGGGEEDQEYDHRLLRGGFANRPLLITVVPPLS
CAPTYRPRPTDQHDIGEFIDDNLRATDGDPTALPYDCLLVFNYEGGGAASEGGSLSSLTS
CSSEEEQDYQRLAHWGPRFSRLALMYNGEGLEDQD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaattgacaagtcctctgtgtggtctgacccttctcgtgttgcagcatgcatgt
actgtacatgtgtcaggactgttccaggtggccatcccagcaggcctggtggaggagcca
catcccctgggttgtcataggaaccagtctggagaggtggacaccataccggatcctgcc
cagtaccgtcagggagaattctcctcagctctgcctttgctgacgatccgacaacctctc
ccagcacagagaaggaagaagagggcttgggtcatgccgccaatcaacatagcagagaat
ggccggggccccttccctaaccaaatgttcaagatacgctccagttacaatgacgaagtg
aagatgtattataaaatcactggcccgggggcagacctgcctcctattggacgtttcata
atcgaaaggaacactggttggttgtctgtgacagaaccccttgacagagagcaacaagct
cagtatatcattgaagcacaggcggaggctcggggatttggtatagaagagaatcctatg
gagatcgtcatcaacgtcctggaccagaatgataataaaccagagtttacccagaatccc
tttctggggcatgtccctgaggacgctgagatagggtctgagtttatgaaggttaatgcc
acggacagagaccagcctggccagataagctctgacctccgctacagcatccgccgccag
gatcctcccacacccagtgacctgttcttcatcaaccccatcactggaggcatcctggtg
gctgcctctggattggacagagagaggcagcagcagttcaagctggtggtagaggcagca
gataacgcaggggcaggtctgacgagcaccagccaggttctgatcaccgtggaagacagc
aatgacaacgcaccaaagtttacccaggacacgtacactgggtccatctcagagaaccag
cagggggtggtggtggtcaagatagaggtaagggatgaggaccagatccacaccccatgc
tggaggagtagattcagaatcatacaaggggacagtgaccaccttttcagcatctccaca
gggcacagtggggaccagggaatcctcgccacatcaaaggagctggactatgaggctagt
gctgtgtacactctgctggtggtggtggagaacgaggtggtgttctccaggcctgtgtcc
acctccacagccaccgtcacggtgagggtggaggacaggaacgaggccccggtcttcagg
ccttcagagatggtcgtctctgtgtctgaggacctgccactggacagtgacctggtgctc
tacacagcctcggacccagacctggacatgaagcagaccgtcaagtatcagttggagaga
gaccatgctggctggttgagtctcaatgagagcacaggactgctggtggtcagaagttcc
ctggacagagaatctccctttatcattgacggcacatacactgtcctcatcctggccatt
gacaatgcggagaccccagccacagggacagggactctggtgattgaagtggaggatgtg
aacgacaacatccccagtgtcgaccagagacacctggtgttctgcagcagccagtcacag
gccctggagctccccatcagagacccagatgggccaggcttctcccagcccttcacagct
cagctgctggaagactccctgaaacactgggacatccacatgaatgactccaagacagcc
attctcctgagtgcgaggactgtgctgaggttgggggagcatgaggtgaacctacgtgtt
agtgacagtgcaggtctctaccaggacatctcgctgcaagctcaggtttgtgactgcaca
ggaagtgatctcatttgccttgagaagtcgatcgccgtcggcatgagtgagaccatgtgg
atcttgggaggtgtcttggctttgcttttgttgctgttgttgctgctgcttttcctgagg
aagagtggttcaggggagaaagcagtcctgctgcaagaggaggaaagccctgtcaggggc
aacatttactgctacgatgaggaggggggaggggaggaggaccaggaatatgaccacaga
ctgctccgtggtggttttgctaaccggcccttgttgatcactgtggtcccgcccctatct
tgtgctcccacataccggcccagacctaccgaccagcatgacatcggagagttcattgat
gacaacctacgtgccacagacggagaccccacggccctgccctacgactgtctcctggtg
tttaactatgagggagggggcgcggcctcggaggggggctccctcagctctctcacctcc
tgcagctcagaggaggagcaggactaccagaggctggcccactgggggccacgcttcagc
aggctggccctcatgtataacggggagggcctggaggaccaggactga
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