Osmerus eperlanus (European smelt): 134021492
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Entry
134021492 CDS
T10927
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134021492 (dennd4a)
Membrane trafficking [BR:
oep04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134021492 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
134021492
NCBI-ProteinID:
XP_062318374
LinkDB
All DBs
Position
5:complement(19368595..19387051)
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AA seq
1756 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLEEELHFDDACHRSAKPKAPITDVAVVIRSMGEEVP
QGYTCVDVTPSGLSAELNGASLRGPQIFLCYKRGKDKPPLTDLGVLYEWKEKLKSGCHIV
QTTPSGRPANISNSSSQRIYITYRRVSQSQPHTSLTVTDVCVIVPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLLCRYPKEDYESFPLPEPVPLFCLPMGATM
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEESLTERQRSQLGLPSTELRP
EDTKTVHTNKSICLLSHWPFFDSFRSFLTFLYRYSISGPHALPIEKHISHFMYKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGSLSTLLMNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYVPP
ADISCVDLDTNTISYKDDKRAMTWKILPRRACKHLLNTLGKLYQQLVDVGQLNREDGHAE
DQVMTDRELSNGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDASSLFD
LQGFLKSRDRSHQKFYSFMMKTQMFIRFIEECSFVSDKDASLAFFDECVDKMDSERPEDS
RLIELDESHRSEHTVYINPPELPTPPPGQEHPLCYSYVGFPVLRPELLDPLEGPDPPTMN
TASRHGSPASPTAIFRRSKQEIKSAQRMAKTYSSMPQMWSKCLLRHCYGLWFICLPAYVN
ACHSKVRALRLAYDVLRRMQERRLQAPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGV
HPNAITYGYYNKAVLESTWPSSTRGGYFLWGKLRNVVLGVVQFKQVGRKPQSQLRDPHLS
DCSDLDTVSHGSVDSANDSAERASIDTDFTKMDSSDDGSSTGGQSDQGYDSLSKEEEERL
GSRERGSTPAAEDKEEALPEREGMVSQQVPTDSKDSCGPLPKKRPNSLNLFGGQGAPRSR
TAKQCPLAADSRLGRAEATSPTTTTASPTAEEQRKSASELGEAEGSGNRQKPAVERSLSC
TGAVVKPDGASIERSMSCTGAVVKPDGASIERSMSCTGAVVKPDGASIERSLSCTGGPVA
RTGVQTGSDPLSLLAAETEQEGDGSRAPSARRDLAEEIQMYMNAVSPLSSRAPSMDLQSP
SSPLFHSSPSPHSSPRPPPLARSHTHLPLVAKPRERLRPSPSLPLGASHRERPSSLVSPS
SPSLSSSSFSMDSLLTPTLGIFKSSVISAGKGVAEKASRLYCRLSSQTSLTQDVNYDQIS
VSSLTSGDPECSSLLEGDAYLDPEGFTSPQHGSASRLRKSTLDSSPGTPSRVFRHNSFSS
GLVPPIRAAQTPDSSPDAGRFHLNHNHTVEVLMSSCSCCKTCDCLVYDEEIMAGWTADDS
NLNTTCPFCGTPFLPFLNVEIKDLRPLRRTSEEKNLLEKDVSASCHPETGTETPQTPTAS
AGIVAGNSQASALAPASSSAPTPAPVTIPYLSPLVVWKELESLLGNEGDQVITSPSIVDQ
HPIVFWNLVWYFRRLELPSNLPALLLASQHFNHTDQPLQSVSSEDSKNVLVRIMWDNLKL
HKDPVQPCYILWNVQCSSSLVRAGACEEGQVFSVEALQAVVRSIQKSDVYQPMSHIIQLL
GPKLGFRRQRSLYRDILFLALVALGKKNISIDAFDREYKMAYDRLTANQVKLTHNCDRPP
GAGVMECRRTFGELCL
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggacctcgtgtagcagactactttgtggttgctggcctcacagat
tcatcgaagcccctggaagaggagctccactttgatgatgcctgccacaggtccgccaag
cccaaagctcccatcactgatgtggctgtagtgattcgctccatgggggaggaggtgccc
cagggctatacctgtgtggatgtcaccccctccgggctctcggcagagctgaacggagcc
agtctcagaggcccacagatcttcctctgctacaagagaggcaaagataagccacctctc
actgatctcggagttctgtatgagtggaaggagaaactgaagtctggctgtcacatcgtt
cagaccacgccctctggtcgcccggcaaacataagcaactcctcctcccagcgcatctac
atcacctaccgccgtgtctcccagagccagccacacacgtcattgaccgtcacagatgtt
tgtgtcatcgttccgggcaaaggggagacgccccctcacactttctgcaaggtggacaag
aacctcaacagcagcatgtgggggtcctctgtctacctgtgttacaagaagtctgtagct
aaaaccaacacgattgcatacaaagcaggtctgctatgtagataccctaaggaggattat
gagtcattccccctgcctgagcctgtgcctttgttctgtctgcccatgggggcgaccatg
gagtgctggccagcccacaccaaacactccctgcctgttttttccacattcgtcctgact
ggagcctctggagaaaaggtgtatggagctgccatccagttctacgagccctacccagag
gagagtctgacagagagacagcgctctcagctgggtctcccaagcacagaactccggccg
gaggataccaagactgttcacaccaacaagagcatctgcctgctgtctcactggcccttc
ttcgactccttcaggagctttctcaccttcctctaccgctactccatctctggaccacat
gctctgcctatcgagaagcacatttctcacttcatgtacaaagtcccatttccctcctca
cagagaccccgcatcctagttcagctgtctccacacgatagccttatgctgagccagccg
gtctcctctcctctacccctcagcggtggtagcctctcgactctgctgatgaacctgggt
cctaaaaacgcagccaccttgctggtgctggcagtcacagagcacaaaatcctggtccac
tccctgcgcccggccgtgctgaccagcgtcacagaggccctggtgtcgatgatcttcccc
ttccactggccgtgtccctacatccccctgtgcccactggccctggcagacgtgcttagt
gccccctgtcccttcattgtgggcgtggactcgcgctacttcgacctctacgtgcccccg
gctgacatcagctgcgttgacttggacaccaacaccatctcctacaaagacgacaaaagg
gccatgacgtggaagatccttcccaggagggcctgcaagcatctcctcaacactctcggt
aaactctatcagcagctggttgatgttggccagctgaaccgtgaggatggccacgcggag
gaccaagttatgactgacagggagctcagcaacggaaagagcctgcacactctggagctg
gagatccaggaggccttcctgcgcttcatggcggccatcttgaggggctaccgctcctac
ctgctccccatcacccaggccccctcggagaagaccacagacgccagctcgctctttgat
ctacaaggattcctgaagagcagagaccgatcccatcagaagttctactccttcatgatg
aagactcagatgtttatccgcttcatcgaggagtgttccttcgtcagtgataaagacgcc
agtctggctttcttcgacgagtgtgtagacaagatggacagcgagcggccagaggacagc
agactcattgagctggacgagtcccaccgcagcgaacacacggtctacatcaaccccccg
gagctgcccaccccgccccccggacaggagcaccctctgtgctatagctatgtcggcttc
cccgtgttgaggcctgagctgctagaccccctggaggggcctgacccccccaccatgaac
acagcctcccggcacggcagccccgccagccccacggccatcttcagacgctccaaacag
gagatcaaatcagcccagcggatggccaagacctactcgtccatgccccagatgtggtcc
aagtgtctgctgcgccactgctacggcctgtggttcatctgcctgcccgcctacgtcaac
gcctgccactccaaggtgcgggcgctgcgcctggcctacgacgtgctgcgcaggatgcag
gagcgccggctgcaggcccctgacgaggtgtgttaccgcgtgctgatgcagctgtgcgga
cagtacgggcagcctgtgttggctgtacgggttctttttgagatgaagaaagcgggggtt
caccccaacgccatcacatatggttattacaacaaggcggtgttggagagcacatggccc
tccagcaccagaggaggctacttcctgtggggaaagctgaggaacgtggtcctgggggtg
gtccagttcaagcaggtgggcaggaagccccagtcccagctccgagatccccacctctca
gactgcagtgatctggacacggtgagccacggaagtgtggacagcgctaacgactcagct
gagcgagcctccatcgacaccgacttcaccaagatggactccagcgatgatggctcaagc
acaggtggccagtcagaccaaggctatgactcactgtccaaagaggaggaggagaggctg
gggagcagagagcgaggcagcaccccagctgcggaggacaaggaggaggctttgccagag
agggagggcatggtttctcagcaggtcccaacagactctaaggattcctgtggaccccta
ccaaagaagaggcccaactccctgaacctgtttgggggacagggagctcccaggtccagg
actgctaagcagtgccccctagctgcagacagcagactaggccgtgcagaggcaacaagc
cccaccactaccactgccagccccaccgctgaggagcagaggaagtccgcctcagagcta
ggagaggcagagggcagcgggaacagacagaagcctgcagtggagagaagcctgagctgc
accggtgctgtggtgaagcctgacggggcgtccatcgagagaagcatgagctgcaccggt
gctgtggtgaagcctgacggggcgtccatcgagagaagcatgagctgcaccggtgctgtg
gtgaagcctgacggggcatccatcgagagaagcctgagctgcaccggtgggccagtggcg
aggacgggcgtccagaccggctccgaccctctgtccctgctggcggcagagacggagcag
gagggggacggcagccgcgccccctccgcccgcagggacctggccgaggagatccagatg
tacatgaacgccgtcagccccctgagcagccgtgcgcccagcatggacctccagagcccc
tccagccccctgttccactccagcccctccccgcacagctcccccaggccccccccgctg
gcacgctcgcacacgcacctccccctcgtcgccaagcccagggaacgcctgcggccctcg
ccgtcgctccccctgggggcctcgcacagggagcgcccgtcctccctggtgtccccctcg
tcgcccagcctgtcctcgtcctccttctccatggactccctgctcacccccaccctgggc
atcttcaagagcagcgtcatctccgccgggaagggcgtggccgagaaggccagccgcctc
tactgccgcctgtcctcccagacatctctcacacaggatgtgaactacgaccagatcagt
gtgtcctccctgacctcaggagacccagaatgctcttctctgttggagggtgacgcctac
ctagatcccgagggcttcacctccccccagcacggcagcgcctcccgcctcagaaagtcc
accctggacagcagccccggcacaccttccagagtgttccgccacaactccttttccagt
ggcttggtcccaccaatcagagctgctcaaactccagactcctccccagacgccggccgc
ttccacctcaatcacaatcacacagtggaggtgctgatgtcgagctgctcctgctgcaag
acgtgcgactgtctggtgtacgacgaggagatcatggccggctggacggcggacgactcc
aacctgaacaccacctgccccttctgtgggactccgttcctgcccttcctcaacgtggag
atcaaggacctgcggccgctcaggaggaccagtgaggagaagaaccttctggaaaaagat
gtgtctgcttcttgtcatccggagacaggaactgaaacacctcagacacccacggcttct
gctgggattgtggctggaaattcacaggcctcagcccttgccccagcctcatcctcagcc
ccaactccagcccctgtgacgatcccttacctaagccccttggtcgtgtggaaggaactg
gagagcctcctggggaacgagggagatcaggtcatcacatcccccagcattgtggaccag
catcccattgtcttctggaatctggtctggtacttccgcaggttagagctaccgagcaac
ctgcccgccctcctcctcgcctcccagcacttcaaccatacagatcagccccttcagagt
gtgtcgtctgaggacagcaaaaatgtgctggtgaggatcatgtgggataacctgaagctg
cacaaagaccctgttcagccctgctacatcctgtggaatgtacaatgttccagttccctg
gtccgtgctggagcgtgcgaggagggccaggtcttcagtgtggaggccctgcaggctgtc
gtgaggagcatccagaagagtgacgtgtaccagcccatgagccatatcatccagctgctg
gggcccaaactgggcttccgaaggcagaggagtctgtacagagatatcctgttcctggct
ctggtggctctgggaaagaaaaacattagtatcgatgcttttgaccgcgagtacaagatg
gcctacgaccgcctgacagccaatcaggtcaaactgactcacaactgtgaccgcccacca
ggtgctggggtcatggagtgcaggaggacttttggggagctgtgtctgtga
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integrated database retrieval system