Osmerus eperlanus (European smelt): 134021508
Help
Entry
134021508 CDS
T10927
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134021508 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
134021508 (ighmbp2)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Other ribosome biogenesis factors
134021508 (ighmbp2)
Translation factors [BR:
oep03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134021508 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134021508
NCBI-ProteinID:
XP_062318402
LinkDB
All DBs
Position
5:complement(19775273..19781026)
Genome browser
AA seq
1011 aa
AA seq
DB search
MEVERFVTKTLELLQEEREAEIEETRLWQESVSLKDLQNKGVCLLKLHIGSQSTGLYGRS
LLVLEPRKHVGSSVLPSNSFGPGDIVGLYDTSGCSPSSQIGTGVVTRISQTSVTVAFEDS
QDGLNMDMDGLYNLLKLANDVTYKRMKKALNTLNGYGSGPASSLIGVLFGYSEPTQLQSS
DVAFFNSGLDDSQREAVSFALSQREVAVIHGPPGTGKTTTVLEVILQAVKQGQKVLCCAS
SNVAVDNLVERLAKCKAKVLRLGHPARLLESIQKHSLDAVLAQSDNTNIIADIRKDIDKA
FMGMKKMRDKGERFNLKREVGELKKELRTREATAITQILKRADVVLSTNTGASADGPLKY
LPVDHFDWVVIDECAQALESSCWIALLKARKCVLAGDYKQLPPTIKSHAAADKGLSVSLM
ERLIQKYGDSVVRMLTVQYRMNSAIMEWASKEMYQGKLTAHCSVEKHLLKDLPGVISNEE
TSTPLLLIDTAGCGLSEMEVADEQSKGNQGEVDIVDLHIKALTTAGLKARDIAVIAPYNL
QVHLLRQRLSAKHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTR
ARRHLTVVCDTQTVQNHGFLKSLIDHMTECGEVRTAFEYLQDIVPQNYTRDHKETKTNAN
TNGSSSAKQKAGGHPGGQVGGHPGGKVGGHPGGKVEMGHKKPTVSKSKGGEATSGSHTKD
SSSTLTEEEQTKNKYTKIKDQIEGFLKEPNLPELRFPSSLNSHDRLLVHQISEELGLRHE
SQGEGRDRCITVSRPPPSGPGPQEGQAGDRPPHPTAKEVEENDPEPIAESSNKPLLDLKS
LHLERMRRERERREENMELKKQQDAIRTMQSQPTKKAKSKGKSHTKAGASDIAAAATVED
DFDALISAVVKAESVCSFVKCKTSVLLLGQLCQFCNRQYCLSHHIPEVHGCGDKAKSHAR
MRISKEGVLYAGSGQKDKSVDPNKKAYLHRKLDSRLKDMATQRKTKPKEKE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaacgttttgtgacaaagacccttgagctcctgcaggaggagagagaagct
gagatcgaggagacaaggctatggcaggagagtgtctctctgaaggatcttcagaacaaa
ggagtgtgtctgctgaaacttcacataggaagtcagtcaacgggcctatatggacggtct
cttctggtgctggagccaaggaagcatgttggtagctcagttcttcccagtaacagcttt
gggcctggggacattgtgggtttatatgacacgagtggttgcagtccatcctcacaaatt
ggtactggggtggtgacacgcatcagccagacatctgttacagtagcttttgaagattcc
caggatggtctcaacatggacatggatggcctctataatctcctgaagctcgcaaatgat
gtcacctacaaacgcatgaagaaagccctaaatacactcaatggatatggcagtggacca
gcatctagtttgataggtgttctctttggctactcggaacctacccagctacaatccagt
gacgtagctttcttcaactcgggcctagatgattctcagcgagaggcagtgtcctttgcg
ttgtctcagagggaagtggctgtgattcatgggccaccagggactgggaaaacaaccaca
gtgctagaagtcatcctccaagctgtaaaacagggacagaaggtcctgtgctgtgcttcc
tctaacgttgctgtggataacctggtggagcgcctggctaaatgcaaggccaaggtcctg
agactgggccaccctgccagactgctggagtccatacagaaacactctctggatgctgtc
ttggcccagagcgacaacactaacatcatagctgacatccgcaaggacatcgataaagcc
tttatgggaatgaagaagatgcgtgacaaaggagaacggtttaatctgaagcgagaagtt
ggggagctaaaaaaagagctgaggaccagggaagcaacagccatcactcagatactcaag
cgcgccgatgttgttttatcaaccaacacgggtgcctctgctgatgggcctctgaagtac
ctaccggtggatcactttgattgggtggtgattgacgagtgtgcccaggcgctggagagc
agctgctggatcgctctgctgaaagcacggaagtgcgttctggctggagactacaagcaa
ctgccgcccaccatcaagtcacatgcagctgcagacaaaggtttgtctgtcagtcttatg
gagaggctgattcagaagtacggggactcagttgtccggatgctgaccgtgcagtaccgc
atgaacagtgccatcatggagtgggcctcaaaagagatgtaccaggggaagctaactgcc
cactgttcagttgagaaacacttgttaaaggatcttcctggcgtcatcagtaatgaagag
accagcacccctcttctcctgatcgacactgcaggctgtggcctgagtgagatggaggtg
gccgatgagcaatcgaaaggcaatcagggtgaggtggacattgttgacttgcacataaaa
gccttgaccacagctgggttgaaggccagggacattgctgttatcgccccgtacaattta
caggtacacttactacgtcagaggctctctgccaagcatcctgaactggagatcaagtct
gtggacggcttccagggaagagagaaagaagctgttgtactttcattggtgcggtctaac
aggaaaggtgaagttggatttctcgctgaagacagaagaatcaacgtggctgtgacccgg
gccaggcgtcacctgactgtggtgtgtgacacgcagaccgtacagaaccatggcttcctc
aagtccctgattgaccacatgactgaatgtggagaggttcggacagccttcgagtacctc
caggatatcgtgccacagaactacacccgtgaccacaaagagaccaaaacgaatgctaac
actaatggctcctcctctgctaaacagaaggccgggggtcacccagggggccaggtcggg
ggtcacccagggggaaaggtcgggggtcacccagggggaaaggtagagatgggacacaag
aagccaactgtcagtaaaagcaagggaggagaggccacctcagggtctcacaccaaggac
agctcttccacactcacagaggaagaacagacaaagaacaaatacaccaagatcaaggat
caaatcgaaggctttctgaaggagccaaacctgccggaactacgattcccatcttcgctc
aactcccatgaccgcctcctggtccaccagatctctgaggagctggggctgaggcacgag
agccagggggagggcagggacagatgcatcactgtgtccagaccaccaccatcaggaccg
gggcctcaagagggacaggcgggggacaggccaccacaccccacagcgaaggaagtggag
gagaatgatccagaacctatagccgagtcttcaaataaacccctattggacctgaagagt
ctccatctggaacgcatgagaagggagcgagagagaagggaggaaaacatggaactgaaa
aagcagcaagatgctatccgtacgatgcaaagtcagcccacaaagaaggcaaagtccaaa
gggaagagccatacgaaagcaggtgcctctgacattgcagctgctgctactgtggaagac
gacttcgatgctctcatcagtgctgtggtgaaggcagagagcgtgtgcagttttgtcaaa
tgcaaaacctcggttcttttactaggacaactctgccagttttgtaacagacagtactgt
ctcagccaccacatacctgaggttcatggctgtggggacaaagccaagtctcatgcccgg
atgaggataagcaaagagggcgtgctttatgctggcagtggacaaaaggacaagtcggtg
gatcctaacaagaaggcctatctgcacaggaaactggattccagacttaaagacatggca
actcagaggaaaacaaaaccaaaagagaaggaatga
DBGET
integrated database retrieval system