Osmerus eperlanus (European smelt): 134021616
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Entry
134021616 CDS
T10927
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
134021616 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134021616 (fan1)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
134021616 (fan1)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
134021616 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf-TRAF
zf-WRNIP1_ubi
PRP21_like_P
SAP
SduA_C
Methyltrn_RNA_4
Motif
Other DBs
NCBI-GeneID:
134021616
NCBI-ProteinID:
XP_062318620
LinkDB
All DBs
Position
5:complement(21368356..21373951)
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AA seq
980 aa
AA seq
DB search
MAERLNTNKTKHQRSLSASKKKGILKNGGTGKSTITSFFNNTPPSKLPCPLCGQMVPRFK
VNEHIDSQCQNFQRDNNDEADSFSSTAVSKLPLSPPRNTPKTPDQDVTCLSKEAKEEPKT
SPYFKKQISREVRGKRVVRTISLGSLSSKLSSKGLKSPDGSRPSNVIELCSSEEEDSGKL
SSSQKENHGITGDNKTIILATQSTSSIEVESPSEKHGGHLPPVVSLAAARLTKRKKGERS
GDSGSEQRTSALSKKVRYVENSEPVEAESSKRTTGASDCSRQGSEPTSDVSCDSSLKSGT
EQALVGSPVVLDGDDLTEPGAGSEAEEADTSDPPRLSYYLRNFRTVLEAVLENEDDRELF
NQDDLSVIHIFERLSVPGQKLYVRLFQRKLKWLQVNKLGYAEISADLSPVVQELVDGSFL
ETENDLQELGEVLDLLPVPELRNLAKSFRLGGSGTPKQQLLDGLLRLSRQKSLFALAPGQ
NNTGAIILKKAKQLAGSCVRLHRGPRAVFSRVLLLFSLTDAMEEEDMTAGGQLYTILLVN
SGRLAFPDYTVLRRTKLFRDREDLIRYEAVMRTLQEVITAMQAGHWDDARVLYTSARAVW
QELRMTHDLSHEENLPVFLRCFTTGWAYTRVLSRGVEILQRLRRYEEAVEELRSLLGQSV
YCPDSRGRWWDRIALNLQQHLKQPKQAIAAIREGLSDPLVRTGHQLSLHQRAARMKESPS
FKKYRLELQDLPTIHVKDVTHVTIRGQLFPHEGGTGKSVFLLPTEEEGGDSTVMCSVEEL
SLAHYRRKGFDQGIHGEGSTFSTLFGLLMWDIIFMDEIPDVFRNPYQTCPLDLFTDHFYE
NRREAVETRVQMLREASVDTLHNLLFDTWTSQEGRECSLVSWERFSSLEQAQSLVSCMGG
TFLGGIIARMAKDYRHCRAGLPDLVVWNTSNNSYKLVEVKGPSDRLSQKQQIWLDELHSL
GADVEVCHVNATGARGARLE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagactaaacacaaacaaaactaaacatcagcgaagtctatctgcctcaaag
aaaaaaggaatcttgaaaaatggagggaccggaaagagtaccatcacctcattcttcaac
aataccccaccttctaaactgccctgtcctctgtgtggccagatggtccctaggtttaag
gtaaatgagcacattgattcacaatgccagaactttcaaagggataacaatgacgaggcg
gattcattcagtagtactgctgtgtctaagctgccattgtcacctcctcgaaataccccg
aagaccccagaccaggacgtcacatgcctttccaaggaagcaaaggaagagcccaagaca
agcccttatttcaaaaagcagatatcacgagaagtgagaggaaagcgtgtggtcaggact
atcagtctgggcagcttgtcttccaagttatccagtaaaggcctcaaatctccggatggc
tctcggccatcgaatgtgatcgagctttgttcttcagaggaggaagactctgggaagctg
agcagctcacagaaggagaaccatggaattacaggtgacaacaaaacaattatattagcc
actcaatcaaccagttctattgaagtagagagtccatcagagaaacatgggggtcatctt
cctccagtggtttctctggctgccgccagactaacgaagaggaagaaaggggagagatct
ggcgacagcggttcagaacagaggacctcggcactcagtaagaaagtcagatatgtggag
aacagtgagccagttgaggctgaatctagcaaacgcacaacaggggcttctgactgcagc
cgacaaggatcagagccgacttcagatgtgtcttgtgactcttctttaaagagcggaaca
gagcaggctctggttggaagccctgtagttctggacggtgatgatctgactgaacccggt
gcagggagcgaggctgaggaagcagacacctcagacccaccgcggttatcgtactacctc
cgtaactttcggactgtgctggaggccgtactggagaatgaggatgacagggagctgttc
aatcaggatgacctgtctgtcatacacatctttgaaaggctctcagtgcctggacagaaa
ctgtacgtgagactgttccagaggaagctgaaatggctccaagtgaacaagctaggctat
gctgaaattagcgctgacctgagtcctgttgttcaagagctggttgatggcagcttccta
gagacagaaaatgacctccaggagctcggggaggttctggacctgctgcccgtcccagag
ctccggaacctggctaagagcttccgcctgggagggtctgggactccgaaacagcagcta
ctggacgggcttcttcgtctgagcagacagaagtctctctttgctctggctcctggtcag
aacaacaccggggcaatcattctcaaaaaggccaagcaactggccggttcctgcgtgcgt
ctccaccgaggacctcgagctgtcttctctcgggttctcctcctgttctctctgactgac
gccatggaggaggaagacatgaccgccgggggtcagctctacaccatcctcctggtcaac
tctggccgcctggccttccctgactacaccgtgcttcgccgcaccaagctgttccgggac
agagaagacctcatcaggtacgaggcggtcatgcgcaccctgcaggaggtgattacagcc
atgcaggcaggccactgggacgacgctcgggtgctttacacctcagccagagcggtctgg
caggagctgaggatgacacacgacctcagtcatgaggagaacctgccggtgttcctacgc
tgcttcaccacaggatgggcgtacactcgcgtgctgtctcgaggcgtggagattctacag
aggctgcgccgctatgaggaagcagtggaggagctgcgctccttattgggccagtctgta
tactgtcctgacagcagggggcgatggtgggacaggatagcgctcaacctgcagcagcac
ctaaaacagcctaaacaggccattgctgctatcagagagggtctgtcagaccctctggtg
cgcacaggtcatcaactttccctccaccaaagagccgccagaatgaaggagtctcccagc
ttcaagaagtaccgccttgaactccaagacctgccaactatccatgtcaaagatgtcact
cacgtgaccatccgaggccagctgttccctcatgagggaggtacggggaaatctgtgttt
ctcctgccaactgaggaggaagggggagactcgactgtcatgtgctctgtggaagagctg
tcactggcacactacaggcggaaaggctttgaccaaggcattcatggagagggatcgaca
ttctctaccctgtttggtctcttgatgtgggacatcattttcatggatgagattccagat
gttttccgaaacccctaccaaacctgtccattggaccttttcactgaccacttctatgag
aatcggagggaggccgtagagactcgtgttcagatgcttcgcgaggcgtctgtggatacg
ctccacaacctgctctttgacacctggacctcacaggaaggaagggaatgttccctggtc
agctgggagcgcttctcctctctggagcaagctcagagtcttgtgtcttgtatgggagga
accttcctgggagggataatcgctcggatggcaaaggattaccgacactgtcgcgctggt
ctgcctgacctggtggtgtggaacacctcgaacaacagctacaagctggtggaggtgaag
gggcccagcgacaggctgtcccagaagcaacagatctggctggatgagctgcacagcctg
ggtgcagatgtggaggtctgccacgtgaacgccacaggggccaggggcgctcgtctggag
tga
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