Osmerus eperlanus (European smelt): 134021630
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Entry
134021630 CDS
T10927
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134021630 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134021630 (nup160)
03036 Chromosome and associated proteins [BR:
oep03036
]
134021630 (nup160)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134021630 (nup160)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134021630 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
TTC22_C
RMD1-3
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
134021630
NCBI-ProteinID:
XP_062318641
LinkDB
All DBs
Position
5:complement(21514720..21533518)
Genome browser
AA seq
1400 aa
AA seq
DB search
MAAVMERSFIEICGFERETLPRFREITVNLGLNALPGGVKYPDSAGGFHYEDSGKLLSIT
SNRFIHWSTSGDSVQLVEQSLDTNLLNNAVRLKFPHCPLLPGGVHIQETVNNVIILIVTN
QTVHRLVLLHPTRMYRSELVSEQMQSIFTDMGKLSLQDPAHSAVIPSGVAGGGAGHAATP
STSAAWLGQQGEAHYALAMPTGGIMIVTLPPSDTQGTVSVLELKRSSVMQRLAGWMPSAI
RGDQSPGDLALCLVAREFEDDTFIFALCHDNKLRMWSYRDQTCLMEADMLEYVPAGTDVH
RLAGQSHRLRLSFSPATGLCLAVYLAAPSHSQFTVLQLAAGYNNRYGLDHISTLFDTQET
LVDFMLTPSDIWALWLDDSNQTVVKLISYEHSERSQWNQVFVQPLPEDEVSIGVDQDPRE
TYLDVLFSPLRFTASAIVKALQIYKRTSERTVDLSWDALKKEVTIAVEDELQGSVTEFEF
SQEEYRLLQVEFWSKFYACCLQYQEALSTPLGLMVNTHTSMVCLLKKGLVSFLLPCFAVD
HLYLYCDEYLSSEVETPLTEDPELARDVLQLVQCLRLVSEAVPGDVAYEMERALDQLEAP
ENTAEQVLDHLLDHDNEDVVENIQSKLQDIRSPLAAMGLLLRELDLETDPEANPDPPLTA
GQSLNVRISLSQLYGSSVTVSVVCQALSQTAMTRALCCRDLLLLQHLYLRLDDNVFLAGG
AQLLQLQQDLIPRTSHLLSSYLLLQHTCQSLACALPLDIIDANLQHLSVLEMSDSLSLAT
NRSVLSPQTVVELFYQGVARKSIISQLFSQQQGPTAGLAVLHWPHMVSSVVQLLAQQLWP
SNPGFQFPECLMANCQYTQLQEYIRLIQPWCQVNMGSCSFMLGQCYLANGEGQKALECFK
KASPEVEKEEFLMRVAGADEEEAASSPLLQYYNKVLRLLEDVGLPELVIQLASLAITVST
TDLRSQAALWTRIFKHHLDLGHNSEAYEALVQNPDSSRQLDCLRQLVVVLCERSQLQDLV
RFSYINLHDEVVSIIESRARAVDLMTHNYYELLYAFHTNRHNFRKAGTVMFEYGMRLGRE
VRTRQGLQKQVNCYLAALNCLRLMKPAYAWIVQPTSGAVYERPGASPKRNYDGEFATGPV
SRQIDILELKDLEREYILARSRLTLAEQDSPSTAIAGSASAVEMVSLLVQTGLFDCALSL
CQTFKLPLTSVFEGLAFKCIKLQYGGDDSQNEAWNWLAANQLSTVITTKESSATDEAWRL
LASYLERFPTQNALHHHCVINKLLSHGVPLPDWLVNAYKGVDAAALLRLYLNFDLLDAAA
ELVLEYVDALLGKGHQYFGIERPLSATAPLVWLPYTSIDQLLQSLNETQTNANIYNRLRD
KLDDYHKLVDQTSRRRLQAQ
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcatggaaaggagtttcatagaaatatgtggatttgagagggaaactctt
ccaagattcagagaaataacagtaaatctcggtctgaatgctcttccaggtggggttaaa
tacccagacagcgcaggcggatttcactacgaggacagcggaaagctcctgtccatcaca
agcaacagatttatacactggtccacctcgggagactccgtgcagctggtggagcagtcc
ctggacaccaacctcctgaacaacgctgtgcgcctcaagttcccacactgccccctactg
cctggaggagtgcacatccaggagaccgtcaacaatgtcatcatcctcatcgtcaccaac
cagactgtgcaccgcctggtgctgttgcaccccacgcgcatgtaccgcagtgagctggtg
tcggagcagatgcagtccatattcaccgacatgggcaagctgagtctgcaggaccccgcc
cacagcgccgtcatccccagcggcgtggcagggggcggggcggggcacgcggccaccccc
agcacctccgccgcctggcttggccaacagggggaagcacactacgccctggccatgccc
accgggggcatcatgatcgtcaccctgccgccgtccgacacccagggtactgtgtcggtc
ctggagttgaagagaagctctgtcatgcagaggctagctggctggatgccctccgccatc
agaggggaccagagcccaggtgacctggccctctgtctggttgccagggagtttgaggac
gacaccttcatcttcgcgctctgtcacgacaacaagctgcgcatgtggtcctacagggac
cagacgtgtctgatggaggcagacatgctggagtacgtccctgctggtacggatgtgcac
cggctggcgggccagagtcaccgtctgcgtctgtccttctccccggccacggggctgtgc
ctggccgtgtatctggcggcgcccagccacagccagttcaccgtgctgcagctggctgcc
gggtacaacaaccgctacggcctcgaccacatctccacgctgttcgacacgcaggagacc
ctggtggacttcatgctcaccccctcagacatctgggctctgtggctggacgactccaac
cagaccgtggtgaagctcatcagctacgagcactcagaaaggagtcagtggaaccaggtg
tttgttcagcctctgcctgaagacgaggtcagcataggagtggaccaggatcccagagag
acctacctggacgtcctgttctctcctctgagattcactgcctcggctatcgtcaaagcc
ctccagatctacaaacgaacctccgagagaaccgtggatctgtcttgggatgcgctgaag
aaggaggtcaccatcgccgtggaggacgagctgcagggcagtgtgacagagtttgagttc
tcccaggaggagtacaggctgctgcaggtggagttctggtccaagttctacgcctgctgt
ctgcagtaccaggaggctctgtctactcctctgggcctgatggtcaacacacacaccagc
atggtctgcctgctcaagaagggcttggtgtcgttcctgcttccctgctttgctgtggac
cacctgtacctctactgcgacgagtacctctcctcggaggtggagacccccctcacggaa
gacccggagctggcgcgggatgttctccagctggtgcagtgtctgaggctggtgagcgag
gccgtaccaggggacgtggcctacgagatggagcgggccctggatcagctggaagccccg
gagaacacagcagagcaggtgctcgaccacctgctggaccacgacaatgaggacgtggtg
gagaacatccagtcgaagctgcaggacatcaggagccccctggcggccatgggcctcctg
ctgagagagctggacctggagactgaccccgaggccaaccccgacccaccgctcaccgca
ggccagtctctgaacgtgcgcatcagcctgtcccagctgtacggcagcagtgtgacagtg
tcggtggtgtgccaggcgctgagccagacagccatgaccagagcgctgtgctgcagggac
ctactgctgctgcagcacctctacctgcgcctggacgacaacgtgttcctggctggagga
gcccagctgctccagttgcagcaggatctgatccccaggacctcccacctgctgtcctca
tacctgctcctccagcacacctgccagagcctggcctgcgccctgcccctggacatcata
gatgctaacctgcagcacctctctgtgcttgagatgtcagattccctttccctggccacc
aacagatcagtgttgagtccccagacggtggtggagttgttctaccagggcgtagcgagg
aagtccatcatctcccagctgttctcccagcagcagggtcccactgcaggcctggccgtg
ctccactggccccacatggtctccagcgtggtccagctgctagcgcaacagctctggcca
agcaacccaggcttccagttccctgaatgtctaatggccaactgtcagtacacacagcta
caggagtacatcagactcatccagccctggtgtcaagtcaacatgggctcctgcagcttc
atgctaggccagtgttacctggccaacggagaggggcagaaggctctggagtgcttcaag
aaggcgtcgccggaggtggagaaggaggagttcctcatgcgggtggcaggagctgacgag
gaggaggccgcctcatctcccctcctgcagtactacaacaaggtgctgcgcttgctggag
gatgtgggactgccagagctggtgatccagctagccagcctggccatcaccgtctccacc
actgacctgaggagtcaggcggctctgtggacgcgtatcttcaaacaccacctggacctg
ggccacaacagtgaggcctacgaggctctggtccagaacccagactcgagcaggcagttg
gactgtttgcgccagctggtggtggttctgtgtgagcgctcccagctccaggacctggtc
cgcttctcctacatcaacctgcatgacgaggtggtcagcatcatcgagtccagagccagg
gctgtggacctcatgacccataactactacgagcttctctacgccttccacaccaacaga
cacaacttcaggaaagcgggcacggtgatgtttgagtacgggatgcgtcttggcagggag
gtgaggaccaggcagggtctgcagaagcaggtcaactgctacctggccgccctcaactgt
ctgcggctcatgaagcctgcatacgcctggatcgtccagcccacctccggggccgtgtat
gagcgccctggagcttcccctaagaggaactacgatggcgagtttgctaccggtccagtg
agtcggcaaatcgacattttggagctaaaggatctggagagagagtacatcttggctcgc
agtcgcctcaccctggcagagcaggactccccctccacagccatcgcaggcagtgcttct
gcagtggagatggtgtccctgctggtccaaacaggactgttcgactgcgctctgtctctc
tgccagaccttcaaactccccctcacttccgtctttgaggggctggccttcaagtgcatc
aagctgcagtacggaggagacgacagtcagaacgaggcgtggaactggctggcagccaac
cagctgtccaccgtcatcactaccaaagagtcaagtgccacagatgaagcctggcggctt
ctggcctcctacttggagaggttccctacccagaatgccttgcaccaccactgcgtcatc
aacaaactgctgtcacatggcgtgcctctgcctgattggctggtcaacgcttataagggc
gtggacgcagcggcgttgttgcgtctctacctgaactttgaccttcttgatgcggccgca
gagctggtgctggagtatgtggatgctctcctggggaagggacaccagtactttggaata
gagagacctctgtcagccacagcgcctcttgtctggctcccgtacacctccatcgaccag
ctcctccagtcgctcaacgagacccaaactaatgccaacatctacaacagactgcgggac
aagctagatgactaccacaagctggtggatcagacgagcagaagacgtttacaggcccag
taa
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