Osmerus eperlanus (European smelt): 134021833
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Entry
134021833 CDS
T10927
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04514
Cell adhesion molecules
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
Brite
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin alpha subunits
134021833 (itga9)
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
134021833
NCBI-ProteinID:
XP_062318876
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All DBs
Position
6:complement(260659..374637)
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AA seq
1034 aa
AA seq
DB search
MQGRMAGRLDIQKGVLNFLCACLSLTVVTSYNIDLEHPIVFRGPNSSFFGYSVLEHYHDN
TRWVLVGAPRASSAYSSAVHTPGALFKCRVHSNPGRRCTEMDLGRGGRPRESCGKTCQGD
RDDEWMGVSLARQDKPNGKILACAHRWKNVYYDTEHILPHGYCSVIPSTLQGVSRPLIPC
YEDHKQKYGEEHGSCQAGIAAVFTEELVVMGAPGSYYWRGTVKVFNLTSNTTYNPDKDHV
DSQRYSYLGYAVTAGRFSSPSVVDVAAGAPQHSGVGKVYIFRIDGQSLVKIFQASGKMMG
SYFGSALCAVDLNGDGLSDLLVGAPMHTSQRDEGQVTLYLSRANGVMEEGGLLNGDHAYN
AHFGECIAAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDASGIITKYSMRLSGHSVQP
GLQMFGQSISGSVDMDGNGYPDLTIGAFMADSVVLLRSRPVIAVDVSIFLPASINITAPQ
CHEGTHLNCFNATVCLRFRGKQLPGLIELQYTLTADAARRQRSQASRVYFSQAGSQISSL
SRLQHLSIDTQDCQQYTAYVKKDVKDVFTAISFEVAYSLGPHMLDPNPNPDLPPLTPVLR
WRKGDKMAAHNKTWFEKNCVSEDCASDLGMHGKLLLSGLHSKPYLALGGVRNVSLNLTIS
NAGDDAYDTNIYLNFSSEVFYINYWQKEEKGISCDLVELDFLKCSVGFPFMRAQTKYHLA
VIFDSSRLSGQNETLQFIVQAKSANPEHKLQDNTLHLSVPLVHEVDTTITGVVTPSSFVY
GTYGNSIDESRFIQLQDLECNFQPLNLTFQVINRGPSRLPGSMVDIRIPSRLSGSGAEMF
HIIDTQVSDGRGNCSVHRNPNPCFLPRDRESVFHTIFSFFTKSGRRVLDCDRPGRACLTI
SCRLGSQAKEEALSVDMKMLLNVEILKRDSSSVVQFVTRGSVRVDDSAVATEITNGLSED
VSVMFEALHSQEPRGYVVGWIIAISLLIGILLFLLLAVLLWKMGFFRRRYREILEAEKNR
KDSNESWDWVEKSH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaggatggccgggcgtctggacatacagaagggcgttttgaactttttatgc
gcgtgtttgtctcttactgtcgttacctcctacaacattgacttggaacatcccatagtg
ttccgtggaccgaactccagttttttcggatattcagttttggagcattatcatgacaat
acacgttgggtgctggtgggagctcccagagccagctcggcctacagcagcgcggtccac
accccaggagccctgttcaagtgtcgggtccacagcaacccgggtcgccgctgcacggag
atggacctcggccgaggtggcaggcccagggagtcctgtgggaagacctgccagggagac
agagacgacgagtggatgggggtcagtctggctcggcaggacaaacccaacggcaagatt
ttggcgtgtgcccacaggtggaagaacgtgtactatgacacagaacacatcctccctcac
ggttactgctccgtcatcccctccaccctacagggagtctctcgaccactcatcccctgc
tacgaagaccataaacagaaatacggggaggagcatggctcatgccaagcaggcatcgct
gcagtcttcacagaggagctggtggtgatgggggctccggggtcctactactggagagga
acagtgaaggtgttcaacctgacatccaacaccacttacaaccccgacaaggaccatgtt
gactcccagagatacagctacctgggctatgctgtgacagcgggacgtttctcctccccc
agtgtggtggatgtagcagcaggagccccacaacacagtggcgtggggaaggtctacata
ttcagaatagatggacagtcactggtgaaaatctttcaagcatctggaaaaatgatgggt
tcatatttcggctctgcgctgtgtgcggtggacctgaatggtgacggcctgtctgacctg
ctagtgggggcgcccatgcacacctcccagagagacgagggccaggtcaccctgtacctg
agccgtgccaatggggtgatggaggaggggggtctactgaatggagaccatgcctacaac
gcccactttggggaatgcatcgctgcgataggagacattgatgacgacggataccaagat
gttgccataggagcaccgaaggaggatgactacggaggtgcggtctatatttatcatggt
gacgcctcgggaatcatcactaaatactccatgaggctgtctggtcacagtgttcagcct
ggtctacagatgtttggacagtccatctctggcagcgtggacatggatggcaacggatac
ccagatctcaccattggtgcgttcatggctgacagcgtggtcctgctgaggtctcgtccg
gtgatcgcggtggatgtgtccatcttcctccccgcttccatcaacatcactgccccgcag
tgccacgagggaacgcacctcaactgcttcaatgccactgtgtgtctgcgcttcaggggc
aagcagctgccaggactcatagagctgcagtacaccctgacagcagatgcagcgaggcgc
cagaggagccaggcctccagagtgtacttctcccaggctgggtcccagatcagctccttg
agccggctgcagcatctgagcatcgacacacaggattgccagcagtacaccgcctacgtc
aagaaggatgtgaaggatgtgttcacggccatcagctttgaggtggcgtacagtctgggc
ccacacatgcttgaccctaaccctaaccccgacctcccacccctgacccctgtcctgcgc
tggaggaagggagacaagatggcagcacacaacaagacgtggtttgagaagaactgtgtg
tctgaagactgtgcttctgacctggggatgcatggaaagttgctgctttctggactccac
agtaaaccctacctggctctgggaggagtgaggaacgtttctctgaacctgaccatctcc
aacgcaggagacgacgcctacgacaccaacatctacctcaacttctcctcagaagtcttc
tacataaactactggcagaaggaggagaagggaatttcctgtgatctggttgagttggat
tttctcaaatgcagcgtgggattccccttcatgagagcacagaccaagtatcatcttgca
gtgatctttgacagcagtcggctgtcagggcagaatgaaaccctgcagttcatagttcaa
gccaaaagtgcaaacccagaacacaagcttcaggacaacacactgcatttgtctgtacca
ctggtacacgaggtggacacaactatcactggggtggtgacccccagctcgtttgtctat
ggtacgtatggtaactccatcgatgagtctcgctttattcagctgcaggacctggagtgc
aacttccagcctctcaacctcaccttccaggtgataaacagaggtcccagcaggttacct
ggctccatggtagacatcaggatccccagcaggttgtctgggagtggagcagagatgttc
cacattattgacactcaggtgtctgatgggagaggtaactgttctgtgcacaggaaccct
aacccatgcttcctgcccagagacagagagagtgttttccacaccattttctccttcttc
accaagtctggacgcagggtcctggactgtgatcgtccaggcagggcctgtctgacgata
tcctgtcgtctgggctcccaggccaaggaggaggcgctgagtgtggacatgaagatgctg
ctaaacgtggagattctgaagagggacagctcctctgtggtccaatttgtgactaggggg
agcgtacgtgtggacgacagtgctgttgcaacggagattaccaatggcctatcagaagac
gtatctgtaatgtttgaggcgctacacagccaggagccgcgaggctatgtggtgggctgg
atcatagccatcagcctgctgatcgggatcctgctcttcctgctgctcgctgtgctcctc
tggaagatgggtttcttccgtcgccgttaccgggaaatcctggaggcggagaagaacagg
aaggacagcaacgagagctgggactgggtggagaagagtcactga
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