KEGG   Osmerus eperlanus (European smelt): 134021833
Entry
134021833         CDS       T10927                                 
Symbol
itga9
Name
(RefSeq) integrin alpha-9
  KO
K06585  integrin alpha 9
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04510  Focal adhesion
oep04512  ECM-receptor interaction
oep04514  Cell adhesion molecule (CAM) interaction
oep04518  Integrin signaling
oep04810  Regulation of actin cytoskeleton
oep04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134021833 (itga9)
   04514 Cell adhesion molecule (CAM) interaction
    134021833 (itga9)
   04518 Integrin signaling
    134021833 (itga9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134021833 (itga9)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134021833 (itga9)
   04810 Regulation of actin cytoskeleton
    134021833 (itga9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oep04515]
    134021833 (itga9)
Cell adhesion molecules [BR:oep04515]
 Integrins
  Integrin alpha subunits
   134021833 (itga9)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha DUF8076
Other DBs
NCBI-GeneID: 134021833
NCBI-ProteinID: XP_062318876
LinkDB
Position
6:complement(260659..374637)
AA seq 1034 aa
MQGRMAGRLDIQKGVLNFLCACLSLTVVTSYNIDLEHPIVFRGPNSSFFGYSVLEHYHDN
TRWVLVGAPRASSAYSSAVHTPGALFKCRVHSNPGRRCTEMDLGRGGRPRESCGKTCQGD
RDDEWMGVSLARQDKPNGKILACAHRWKNVYYDTEHILPHGYCSVIPSTLQGVSRPLIPC
YEDHKQKYGEEHGSCQAGIAAVFTEELVVMGAPGSYYWRGTVKVFNLTSNTTYNPDKDHV
DSQRYSYLGYAVTAGRFSSPSVVDVAAGAPQHSGVGKVYIFRIDGQSLVKIFQASGKMMG
SYFGSALCAVDLNGDGLSDLLVGAPMHTSQRDEGQVTLYLSRANGVMEEGGLLNGDHAYN
AHFGECIAAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDASGIITKYSMRLSGHSVQP
GLQMFGQSISGSVDMDGNGYPDLTIGAFMADSVVLLRSRPVIAVDVSIFLPASINITAPQ
CHEGTHLNCFNATVCLRFRGKQLPGLIELQYTLTADAARRQRSQASRVYFSQAGSQISSL
SRLQHLSIDTQDCQQYTAYVKKDVKDVFTAISFEVAYSLGPHMLDPNPNPDLPPLTPVLR
WRKGDKMAAHNKTWFEKNCVSEDCASDLGMHGKLLLSGLHSKPYLALGGVRNVSLNLTIS
NAGDDAYDTNIYLNFSSEVFYINYWQKEEKGISCDLVELDFLKCSVGFPFMRAQTKYHLA
VIFDSSRLSGQNETLQFIVQAKSANPEHKLQDNTLHLSVPLVHEVDTTITGVVTPSSFVY
GTYGNSIDESRFIQLQDLECNFQPLNLTFQVINRGPSRLPGSMVDIRIPSRLSGSGAEMF
HIIDTQVSDGRGNCSVHRNPNPCFLPRDRESVFHTIFSFFTKSGRRVLDCDRPGRACLTI
SCRLGSQAKEEALSVDMKMLLNVEILKRDSSSVVQFVTRGSVRVDDSAVATEITNGLSED
VSVMFEALHSQEPRGYVVGWIIAISLLIGILLFLLLAVLLWKMGFFRRRYREILEAEKNR
KDSNESWDWVEKSH
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgcagggaaggatggccgggcgtctggacatacagaagggcgttttgaactttttatgc
gcgtgtttgtctcttactgtcgttacctcctacaacattgacttggaacatcccatagtg
ttccgtggaccgaactccagttttttcggatattcagttttggagcattatcatgacaat
acacgttgggtgctggtgggagctcccagagccagctcggcctacagcagcgcggtccac
accccaggagccctgttcaagtgtcgggtccacagcaacccgggtcgccgctgcacggag
atggacctcggccgaggtggcaggcccagggagtcctgtgggaagacctgccagggagac
agagacgacgagtggatgggggtcagtctggctcggcaggacaaacccaacggcaagatt
ttggcgtgtgcccacaggtggaagaacgtgtactatgacacagaacacatcctccctcac
ggttactgctccgtcatcccctccaccctacagggagtctctcgaccactcatcccctgc
tacgaagaccataaacagaaatacggggaggagcatggctcatgccaagcaggcatcgct
gcagtcttcacagaggagctggtggtgatgggggctccggggtcctactactggagagga
acagtgaaggtgttcaacctgacatccaacaccacttacaaccccgacaaggaccatgtt
gactcccagagatacagctacctgggctatgctgtgacagcgggacgtttctcctccccc
agtgtggtggatgtagcagcaggagccccacaacacagtggcgtggggaaggtctacata
ttcagaatagatggacagtcactggtgaaaatctttcaagcatctggaaaaatgatgggt
tcatatttcggctctgcgctgtgtgcggtggacctgaatggtgacggcctgtctgacctg
ctagtgggggcgcccatgcacacctcccagagagacgagggccaggtcaccctgtacctg
agccgtgccaatggggtgatggaggaggggggtctactgaatggagaccatgcctacaac
gcccactttggggaatgcatcgctgcgataggagacattgatgacgacggataccaagat
gttgccataggagcaccgaaggaggatgactacggaggtgcggtctatatttatcatggt
gacgcctcgggaatcatcactaaatactccatgaggctgtctggtcacagtgttcagcct
ggtctacagatgtttggacagtccatctctggcagcgtggacatggatggcaacggatac
ccagatctcaccattggtgcgttcatggctgacagcgtggtcctgctgaggtctcgtccg
gtgatcgcggtggatgtgtccatcttcctccccgcttccatcaacatcactgccccgcag
tgccacgagggaacgcacctcaactgcttcaatgccactgtgtgtctgcgcttcaggggc
aagcagctgccaggactcatagagctgcagtacaccctgacagcagatgcagcgaggcgc
cagaggagccaggcctccagagtgtacttctcccaggctgggtcccagatcagctccttg
agccggctgcagcatctgagcatcgacacacaggattgccagcagtacaccgcctacgtc
aagaaggatgtgaaggatgtgttcacggccatcagctttgaggtggcgtacagtctgggc
ccacacatgcttgaccctaaccctaaccccgacctcccacccctgacccctgtcctgcgc
tggaggaagggagacaagatggcagcacacaacaagacgtggtttgagaagaactgtgtg
tctgaagactgtgcttctgacctggggatgcatggaaagttgctgctttctggactccac
agtaaaccctacctggctctgggaggagtgaggaacgtttctctgaacctgaccatctcc
aacgcaggagacgacgcctacgacaccaacatctacctcaacttctcctcagaagtcttc
tacataaactactggcagaaggaggagaagggaatttcctgtgatctggttgagttggat
tttctcaaatgcagcgtgggattccccttcatgagagcacagaccaagtatcatcttgca
gtgatctttgacagcagtcggctgtcagggcagaatgaaaccctgcagttcatagttcaa
gccaaaagtgcaaacccagaacacaagcttcaggacaacacactgcatttgtctgtacca
ctggtacacgaggtggacacaactatcactggggtggtgacccccagctcgtttgtctat
ggtacgtatggtaactccatcgatgagtctcgctttattcagctgcaggacctggagtgc
aacttccagcctctcaacctcaccttccaggtgataaacagaggtcccagcaggttacct
ggctccatggtagacatcaggatccccagcaggttgtctgggagtggagcagagatgttc
cacattattgacactcaggtgtctgatgggagaggtaactgttctgtgcacaggaaccct
aacccatgcttcctgcccagagacagagagagtgttttccacaccattttctccttcttc
accaagtctggacgcagggtcctggactgtgatcgtccaggcagggcctgtctgacgata
tcctgtcgtctgggctcccaggccaaggaggaggcgctgagtgtggacatgaagatgctg
ctaaacgtggagattctgaagagggacagctcctctgtggtccaatttgtgactaggggg
agcgtacgtgtggacgacagtgctgttgcaacggagattaccaatggcctatcagaagac
gtatctgtaatgtttgaggcgctacacagccaggagccgcgaggctatgtggtgggctgg
atcatagccatcagcctgctgatcgggatcctgctcttcctgctgctcgctgtgctcctc
tggaagatgggtttcttccgtcgccgttaccgggaaatcctggaggcggagaagaacagg
aaggacagcaacgagagctgggactgggtggagaagagtcactga

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