Osmerus eperlanus (European smelt): 134021836 Help Entry 134021836         CDS       T10927                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism oep  Osmerus eperlanus (European smelt) Pathway oep03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oep00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     134021836 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oep03400]     134021836 (msh6) DNA repair and recombination proteins [BR:oep03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      134021836 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II DUF6912 Motif Other DBs NCBI-GeneID:  134021836 NCBI-ProteinID:  XP_062318877 LinkDB All DBs Position 6:569038..592904 Genome browser AA seq 1356 aa AA seqDB search MAKQSTIFNFFNKSPPPVSKPKPSPSPTEADVPSSVLKSSSSPSEQAKLAAPKSNKTPAK TSKKAAKGGFSKLFGDKIASKKESVSSPACPFSGGALVWAKLEGHPWWPCMVVPQPLSGQ QMRGRGKDQRLHVHFFDEPPTRGWVSTKYLRPYTGSESSDTKVGGVFFSGKPVIRRAMEL ADAVLAHSPEARLQTPICNLPSDEEEEEDMELDKSTLSEEEEEEEEMTKAKAHRRSSRAA AEQCNKPKRRRIIVASESDGSEEEFRPDQATGSSEDEEEAVVSSTEEEMESEPDSPIKPV KRKRPLEQPSATPKPRAPQGPSRASPMASTKTRLAAFSAPDGVESPAGGAEGGIWDHEKL EWLQAGRRKDACRRRQSDEEYDPTTLYVPEDFLNRTTPGMRRWWQLKAEMFDAVLFYKVG KFYELYHMDAVIGVNELNLTFMKGSWAHSGFPEIGFGRFSDVLVQRGYKVARVEQTETPE MMESRCKAMARPTKFDRVVRREVCRVITRGTQTYSVLDGAPAESHSSFLLSLKEKAEASG RCYGVSFVDTSVGVFHVGQFQDDRHCSRLRTLVARYAPAQVLFEKGNPSTETRKILKSCL CSAMQEPLNAGSQFWDAQKTLKQLSEEDYFRESMQEGVSLPAVLSSMTSEGDSLGLTPKE GYELALSALGGCIFYLRKCLVDKELLSMANFQEYIPVDVELEKASGSSSFFAQTRQRLVL DGVTLTNLEVLQNGSGGTEGSLLQRLDSCSTPFGKRLLKQWLCAPLCNPAAIEERLDVLE GLMGAAGPAEEASQLLKKLPDLERLLSKIHSIGSPLKGPEHPDSRAVLYEEVTYSKRKIA DFLSALDGFKTMQEVTSVLGPVADGSQSKLLRQLVSLRSDRGEGLFPDLSLELKRWDTAF DHQKARTTGVITPKTGFDPEYDQALSGIQACEAELQAYLERQRRRLGCRSLAYWGTGRNR YQMEVPDSVAERNVPEEYEVKSTKKGCKRYWTREIERLFGELQSQEEKRDAALKDCMRRL FYNFDKNYRNWQTAVECMAVLDVLLSLTRYSQGGDGPMSRPQVLLPGDDSQSASFLDLRG SRHPCVTKTFFGDDFIPNDIAIGCPGREEEEGQEAGSGVTGQAPCVLVTGPNMGGKSTLM RQCGLVVVLAQLGCYVPAESLRFSPVDRIFTRLGASDRIMAGESTFFVELSETASILLHG TQHSLVLLDELGRGTATYDGTAIASAVVSELAERLGCRTLFSTHYHSLVEDYSHSTAVRL GHMACMVEKESDDPSLEAITFLYKFTSGACPKSYGFNAARLANLPPDVIQSGASKAREFE RSSMSLRVFKKLCRYADQAVVDGLLFSSLLETISSL NT seq 4071 nt NT seq  +upstreamnt  +downstreamnt atggccaagcaaagtaccatctttaattttttcaacaagtcacctccaccggtgtccaag ccgaagccgagcccgtctcctacggaggcagatgtaccgtcctccgtcctcaagtccagc tcctctcccagcgagcaagctaagcttgcagccccaaagagtaacaagactccggccaag acgagcaagaaagcggccaagggtggattcagcaaactgtttggagataaaatagcatca aagaaggaaagtgtttccagcccggcatgtcctttcagcggtggcgctcttgtgtgggcc aagctggaagggcatccctggtggccgtgcatggtagtgccgcagccgctcagcggccag cagatgcgcgggcgggggaaggaccagcgcctgcacgtgcacttcttcgatgagcccccg acccgcgggtgggtcagcaccaagtacctccggccatatacaggctccgagagcagtgac actaaggtcggaggcgtgttcttcagtggaaagcctgtgatccgtagggccatggagctg gccgacgccgtcctggcccacagccctgaggccaggctgcagacgcccatctgcaacctt ccttctgacgaggaagaggaggaggacatggagctggataagtctactctgtctgaggag gaggaggaagaggaggagatgacgaaggccaaggcccatcggcgttcttcccgtgctgcc gctgagcagtgcaacaagcccaaacgccggcgcatcatcgtggcctcagagagcgatggc tcggaggaggagttcagaccagaccaggcgacagggagcagcgaggatgaggaggaggcc gtggtgagcagcactgaagaggaaatggagagtgaaccagacagccccatcaagccagtg aagcgtaaacgccccttggagcagccctcagccacgcccaaaccccgggccccccagggc cccagcagggcctcccctatggccagcaccaagacccgcctcgctgccttctcggccccc gacggcgtggagagcccggcggggggggcagagggaggcatctgggaccacgagaagctg gagtggctgcaggcggggaggaggaaggacgcctgcaggaggagacagtcggacgaggag tacgaccctaccaccctgtacgtccctgaggacttcctgaacagaaccacgccaggcatg cggcgctggtggcagctgaaggccgagatgttcgacgctgttctcttctacaaggtgggc aagttctacgagctgtaccacatggacgctgtgattggcgtgaacgagctgaacctcacc tttatgaagggctcctgggcccactctggattccccgagattggatttgggcgcttttct gacgtgctggtccagaggggctacaaggtggcccgcgtggagcagacagagactcctgag atgatggagtcccgctgcaaggccatggcgaggcccaccaagttcgaccgcgtggtgcgg cgtgaggtgtgcagggttatcacgcgcgggacccagacctacagcgtgctggacggggcc ccagctgagagccacagctcgttcctgctgagcctgaaggagaaggcagaggcgtccggg cgctgctacggagtcagctttgtggacacttccgtaggggtgttccacgtggggcagttc caggacgacaggcactgctcacggctccggaccctggtggcgcgctacgccccggcccag gttctgtttgagaaggggaacccgtcgactgagactcgcaagatcctcaagtcctgtctc tgctctgccatgcaggagccgctgaatgcagggagccagttctgggacgcccagaaaact ctgaagcagctgtctgaagaagactacttcagagaaagtatgcaggagggagtcagcctg ccagctgtgctgagctccatgacctccgagggagactctctgggcctaactcccaaggag gggtacgagctggctctgtctgctctgggaggctgcatcttctacctcaggaagtgcctg gtggacaaggagctgctgtccatggccaacttccaggagtacattccggtggacgtggag ctggagaaggcgtccgggtcgagcagcttctttgcccaaacccgccagcgtctagttctg gatggggtgacactgaccaacctggaggttctgcagaatggctctggcggcacggagggc tcgctgctgcagcgcctggactcctgctccacgcccttcggcaagcggctgttgaagcaa tggctctgcgctccgctttgcaacccggcggccatcgaggagcgcctggacgtcctggag ggcctgatgggggcggctggcccggcggaggaggcctcccagctgctgaagaagcttccg gacctggagaggctcctcagtaagatccatagtatcggttcacctctgaagggcccggag caccccgactccagagccgtgctctacgaggaggtcacctacagcaagcgcaagatcgca gacttcctgtctgcgctggacggcttcaagaccatgcaggaggtcacgtcagttctggga cccgtcgcagatggctcccagtccaaactgctgcgccagcttgtgagcctgaggtccgac agaggcgaaggcctcttcccagacctgtcattggagctgaaacgctgggacacggcgttc gaccaccagaaggcacgcaccaccggcgtgatcacgcccaagacaggcttcgaccccgag tacgaccaggcgcttagtgggatccaggcctgcgaggctgagctgcaggcctacctggag cgccagcggaggcgtctcggctgccgtagcctagcttactggggcaccgggcgcaaccgc taccagatggaggtcccggacagcgtggccgagaggaacgtgcccgaggagtatgaggtg aagtccaccaagaagggctgcaagcgctactggacccgtgagattgagcgtctctttggg gagctgcagagtcaggaggagaagagggacgctgcgctgaaggactgcatgaggaggctt ttctacaactttgacaagaactacaggaactggcagaccgctgtggaatgcatggctgta ctggacgtgctcttgagcttgacccggtacagccaggggggagatggaccaatgagcagg cctcaggtgctgcttcctggtgatgacagccaatcagcttccttcttggacctgcgcggg tcccgccacccctgtgtcaccaagacgttctttggagacgacttcatccccaatgacatt gccattggctgccctggcagagaggaggaggaggggcaggaagcaggaagtggtgtgaca ggccaagccccctgtgttctggtcactggacccaacatgggtggaaaatccactctcatg agacagtgtgggctggtggtggttctggcccagctgggctgctatgtcccagctgagagc ctccgcttctcccctgtggaccggatcttcacacgcctaggggcgtcggaccgcatcatg gctggtgagagcaccttcttcgtggagctcagtgagacggccagcatcctgctgcatgga acacagcactccctggtgctgctggacgagctgggcaggggcacagccacctatgacggg acggccatcgccagtgccgtggtgagcgagctggcggagaggctgggctgcaggactctg ttctccacccactaccacagcctggtggaggactacagccacagcactgctgtcaggctg ggccacatggcctgcatggtggagaaggagagtgacgaccccagcctggaggccatcacc ttcctctacaagttcacctcgggagcgtgtcctaagagctacggcttcaatgctgcccgg ctcgccaacctgcccccggacgtcatccaatcaggagccagcaaggcccgggagtttgag aggagcagcatgagcctccgagtattcaagaagttgtgccggtatgcagaccaggctgtt gtggacggcctcctcttctcctcactgctggagacgatcagcagcctgtag

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