Osmerus eperlanus (European smelt): 134022190
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Entry
134022190 CDS
T10927
Symbol
zswim8
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
oep Osmerus eperlanus (European smelt)
Brite
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134022190 (zswim8)
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GFIT
Other DBs
NCBI-GeneID:
134022190
NCBI-ProteinID:
XP_062319491
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Position
6:complement(12111912..12139171)
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AA seq
1973 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEAAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLEPPEPGGGGGGGGRPGSSEDYKGRGSG
YSPQQEVAVRPKENVASKRKGLSAGGGPGVLVRLAAGGGGVSLSVEEGGGGKGSYKAGSS
SSSAGGKGKLAQGGKGASGGGGAAGGGVGGKHATVKRRTSSEDSSLEPDMAELSLDDGSS
LALGAEASNTFEFMPPPAEMLPSPGPLLREPRKYSGAGNAGKERPFDPKRANHVAPFPAA
AAFPPKEAVVVVAAAATVLVEKEVELEGDLEEVAGEGARPAGEARPSAAPATNPVPIAAK
PPRGRREGGAGGGGGGAVAAPANQVPEGAAGVAAAGGDPVGEDDYQAYYLSAASEEGPDR
GVPENNHEEEPDIFAGIKPLEQEGRMEVLFACAEALHAHGYSNEACRLAVELAGDLLANP
PDLKVEQPQTKGKKSKVSTSRQTQVATNTLSKAAFLLTVLSERLELHNLAFSTGMFSLEL
QRPPASTKALEVKLAYQESEVVSLLKKIPLGLVEMTSIRDRGEQLRDGNFCDYRPVLPLM
LASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLC
EGTRREKGDLALALMITYKDDQSKLKKILDKLLNRESQTHKPQTLSSFYSSKPAANSQRS
PSKHATHGAGGATGGGVSKHGPSSSSTTTNSNAVSSSSSSVQAVASGGVAGHQAALGGGG
VPNSTVAGEGVSEAREQDCAQPASCDQQSEAAPFKPEGTVPSRLALGGRGAYNRCWGSPV
RQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGS
SSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGG
NSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQ
AMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNP
NEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGA
QREGPGRCGANGGAGRRPPDTGCGLLENGGAMESSGVATVTASVTAAAVVPVISVGSTIY
QSHALPGSAMAHPHGQGLHPYTTIQAHLPSVCTPQYLGHPLQHVPRPTVFPVSGAAYPQG
MHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTETGLPLSTTVAGA
ASFSALYPVGGVHSGSSLQAIQGASLPGMSSQPAALVSTPFPAEDEQHSQPISQQGLHYL
HSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAK
GVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADY
DDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggggaaaggttctccttcgaagattctgac
cggtttgaagaggattcgctctgctccttcatatctgaggcagagagcctgtgtcaaaac
tggaggggatggaggaaacaatctgcgggtcccaattcaccaacagtaaaaatcaaagat
ggacaagtgatccccctggtggagctgtctgccaagcaggtggcgttccacatccccttc
gaggtggtggagaaggtctaccctcctgtcccagagcagctgcagctacgcatcgcttac
tggagcttccctgagaacgaggaggacatcaggctctattcctgcttagccaacggcagc
cctgatgagttccagcgtggggagcagctgtaccggatcagagctgttaaagacccgctg
cagataggtttccacctcagtgccactgttgtgtcgccccaggccggccaatcaaaaggg
gcctacaacgtggcggtcatgttcgaccgctgccgcatcacttcctgtagctgcacctgt
ggcgccggggccaagtggtgcgcccatgtggtggccctctgtctcttcaggattcacaac
gcatctgcggtgtgcctgcgcgcccccgtgtctgagtcgctgtctcggctgcagagggac
cagctgcagaagttcgcccagtacctcatcagtgagcttcctcagcagatcttgcccacg
gcccagcggctcctggacgagctgctgtcgtcccagtccacggccatcaacaccgtgtgt
ggcgctccagaccccaccgccggaccctccgcctccgaccagagcacctggtacctggac
gagtccactctcagcgacaacatcaagaagaccctgcacaagttctgcggaccctctccc
gtggtcttcagtgatgtcaactccatgtacctgtcctccacggagccccctgcagcggct
gagtgggcctgtctgctgcggcccctgagggggcgcgagcccgagggcatctggaacctt
ctgtccatcgtcagggagatgttcaagaggagggacagcaacgccgccccccttctggag
atcctcaccgagcaatgtctcacctacgaacagatcatcggctggtggtacagcgtgcgt
acatccgcctcccacagcagcgccagcgggcacacgggccgcagcaacgggcagtcggag
gtggcggcgcatgcctgtgccagcatgtgtgacgagatggtggtgctgtggaggctggct
gtgctggaccccaccatgagcccccagaggcgcctggagctggcagcgcagctcaagcag
tggcacctgaaggtgatcgagatcgtcaagaggggccagcaccgcaagtccctggacaag
ctgttccagggcttcaagccggcggtggagtcctgctacttcaactgggaggccgcctac
cccctgccgggcatcacctactgcagcgccgacaagaagagcgcctccttctgctgggcg
cgagcggtgcagcagcagaggggggccaaggccggcctggagccccccgaacccggagga
ggagggggaggaggagggaggccggggagctccgaggactacaaaggcagagggagcggc
tactcgccccagcaggaagtggcggtccgccccaaggagaacgtcgcgagcaagcggaag
gggttgtcggcgggaggcgggccgggggtgctggtgcgcctggcggcggggggcggcggg
gtgtccctgtccgtggaggagggcggcggcggcaagggctcgtacaaggccgggagctcg
tcctcctcagccggggggaagggcaagctggcgcaggggggcaagggggcgtccggggga
gggggggccgcgggggggggggtcggggggaagcacgccacggtcaagcggcgcaccagc
agcgaggacagctccctggagcccgacatggccgagctgagcctggacgacgggtccagc
ctggcgctgggggcggaagccagcaacaccttcgagttcatgccgccgccggcggaaatg
ctgccctcgcccggcccgctgctccgagagccgcgcaagtacagcggggcggggaacgcc
ggcaaggagcgcccattcgaccccaaacgggccaaccacgtcgccccgttccccgccgct
gccgccttcccccccaaggaagcggtggtggtcgtcgctgccgccgccaccgttctcgtg
gaaaaggaggtggagctcgaaggcgacctggaggaggtcgccggcgagggggcgcgcccg
gccggggaagcccgaccctcggccgcgcccgccaccaaccccgtgccaatcgctgccaag
ccaccgagggggcggagagagggcggggcaggaggaggaggaggaggagctgtggccgct
ccggccaatcaggtcccggagggcgctgcgggtgtggcggcggcagggggagaccccgtg
ggagaggacgactaccaggcctactacctgagcgcggcgtcggaggaggggccggacaga
ggggtgccggagaacaaccacgaggaggaaccggacatcttcgctgggatcaaacccctg
gagcaggagggccgcatggaggtgctgtttgcgtgcgccgaggccctccacgcccacggc
tacagcaacgaggcatgccgattggccgtcgaactggctggagacttgctggccaatcct
ccagacttgaaagtggagcagcctcagacaaagggtaagaagagcaaggtgtccaccagc
cgccagacccaagtggccaccaacacgctgtccaaggcagccttcctgctgacggtgctg
agcgagaggctggagctccacaacctggccttcagcaccggcatgttctctctggagctg
cagaggcccccggcctccaccaaggccctggaggtgaagctggcgtaccaggagtcagag
gtggtgtccctgctgaagaagatccccctgggcctggtggagatgacctccatacgggac
cgaggggagcagctccgcgacggcaacttctgcgactaccggcccgtcctgcccctcatg
ctggctagcttcatcttcgacgtgctctgcaccccagtcgtgtccccaacgggctcccgg
cctcctagccgtaaccgtaacaacgagatgccgggcgacgaggagctgggcttcgaggcg
gcggtggcagcgctggggatgaagaccacggtgagcgaggcagagcaccccctgctgtgt
gagggcaccaggagagagaagggagacctggccctggccctcatgatcacctacaaggac
gaccagagcaagctgaagaagatcctggataagctgttgaaccgggagagccagacccac
aagccccagaccctgagctccttctactccagcaagcccgccgccaacagccagcgcagc
ccctccaagcatgccacgcacggggccggcggcgccaccggagggggcgtctccaaacac
gggccctcctcctcttccaccaccaccaactccaacgccgtcagctcctcctcctcctcg
gtgcaggcggtggccagcgggggcgtggcggggcaccaggcagcgctggggggaggcggg
gttccgaacagcacagtggccggcgagggcgttagcgaggcgagagagcaggactgcgcc
cagcctgcgtcatgtgaccagcagagtgaggcggcgcccttcaagccggagggtacggtg
cccagccgcctggcgctgggggggcggggcgcctacaaccgctgctggggttcccccgtc
cgccagaagaagaaacacacaggtatggccagcatcgacagcagcgccccggagaccacc
tccgacagctcgcccaccctcagccgacgcccgctccgagggggctgggccgcagcctcc
tggggaaggggccaggacagcgacagcatcagcagctcctcctccgattcgctgggctcc
tcctcctccagtggttcccgcagggccgggggcggggctagggcaaagagcaccgacacc
agcaggtataaaggccgtcgcccagagtgccacgcaccccacgtccccaaccagccatca
gaggcggcggcccacttctactttgagctggccaagacggtgctgatcaaggccgggggg
aacagctccacttccatcttcacccagccctcggccagcgggggccaccaggggccccac
cggaacctgcacctgtgtgccttcgagatcggcctgtacgccctgggcctgcacaacttt
gtctctcccaactggctgtcacgcacctactcctcccatgtgtcctggatcaccggccag
gccatggagattggcagtgccgctctcaacatcctggtggagtgttgggacgggcacctc
acccctcctgaagtggcgtccctggcagacagggcatcacgggcacgtgatcccaacatg
gtgcgggcagcggcggagctggcactgagctgcctcccccacgcccacgccctcaacccc
aatgagatccagagggccctggtccagtgtaaagaacaggacaacgtcatgctggagaag
gcctgcatggccgtagaggaggccgccaaggggggaggcgtgtaccccgaggtgctgttc
gaggtggcccaccagtggtactggctctacgagcagacggtgggcgggggctcgggggcc
cagcgcgaggggcccggccgctgcggggccaacggcggcgcgggccggaggcccccggac
acgggctgcggcctgctggaaaacgggggggccatggagtcctcgggcgtggccacggtg
acggcgtctgtgacggcggcggccgtggtgcccgtcatctcggtgggctccaccatctac
caatcgcacgcgctgcccggctcggccatggcccacccccacggccaggggctgcacccc
tacaccactatccaggcccacctgcccagcgtgtgcaccccgcagtacctgggacacccc
ctccagcacgttccccgacccactgtcttccctgtgtcgggggctgcctacccacaggga
atgcacccggcctttatcggtgcccagtaccccttctcagtggccaccggcccccatccg
cccatggcggccaccgccgtcaccttccctggcgtgcccgttccgtccatgactcagatc
gccgtccacccctaccacacggagacgggcctgcctctgagcaccacagtagcaggagcc
gcgtctttctccgctctctacccagtaggtggtgtccactcaggctcctccctccaggcc
atccagggggcctccctccctggcatgtcttcccagcccgcagcattggtcagcaccccc
ttcccagctgaggacgagcagcacagccagccaatcagccaacagggcctgcattacctg
cattcagcctacagagttggcatgctggccttggaaatgctgggcaggagggctcacaac
gaccaccccaacaacttctcccgcagccccccctacacagaggacgtcaagtggctcctg
ggcctagctgcacgactaggtgtgaactatgtgtaccagttctgcgtgggcgcggccaaa
ggcgtgctcagccccttcgtgctgcaggagatcatcatggaggctctgcagaggctcaac
cccgcccacatccacgcccacctgcggacgcccgccttccaccagctggtacagcgatgt
cagcaagcctacctgcagtacatccaccaccggctgatccacctcaccccggctgactat
gacgattttgtcaacatcatccgcagcgcgcgaggggctttctgcctgacccccgtgggc
atgatgcagttcaacgacgtgctgcagaacctgaagaggggcaagcaaaccaaggaactg
tggcagcgcatctccctggagatggccaccttctctccgtga
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