Osmerus eperlanus (European smelt): 134022236
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Entry
134022236 CDS
T10927
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134022236 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oep04990
]
134022236 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
134022236 (ldb3a)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134022236
NCBI-ProteinID:
XP_062319572
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All DBs
Position
6:13085859..13110329
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AA seq
293 aa
AA seq
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MSTYNVSLNGPAPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLNQGDIIVAIDGVSTEG
MTHLEAQNKIKCASFNLALTMQRSKRPVPQGNPRIDSPLTVIPHQKVITNTPANNEYMPN
FNPGVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQGKGQEG
MPGEEGLAGGSPFATLPVKDRLVDSASPVYQAVIQPRDKNEEMADWARGATQLQSKSFRM
LAHITGTEYMQDPDLEALMRSRERFESELKGPRFAKLKNWHNGLSAQILNLPE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctacaacgtgtcactgaacgggcctgcgccttggggctttaggttgcaggga
ggaaaggacttcaacatgccactgaccatctctaggatcactccggggagcaaggcagcg
cagggaaacctgaaccagggtgacatcatcgtggccatcgatggggtgagcactgagggg
atgactcacctggaggcccagaacaagatcaagtgtgccagttttaacctggccctcaca
atgcagaggtcaaaacgcccagtccctcaaggcaaccccagaatcgactctcccttaact
gttatccctcatcagaaggttattaccaacactcctgccaacaacgagtacatgcccaac
ttcaaccccggcgtgttaaaggactccgccctgtccacccacaagccaatcgaagtaaag
ggcccaggaggcaaggccaccatcatccacgcccagtacaacacgccaattagcatgtac
tcccaggatgccattatggacgccattgccggacagtcccagggcaagggacaagagggc
atgccgggagaggagggactagctggtggttccccctttgctacgctcccagttaaagac
cgtcttgtagacagtgcctccccagtgtatcaggctgtcatccagcctcgggacaagaac
gaggagatggctgactgggctcgcggtgccacccagctgcagtccaagtccttccgcatg
ctggcccacatcacgggaacggagtacatgcaagacccagacctggaagctctgatgagg
tcaagagaaaggtttgagtcagaactcaagggcccacgatttgccaaattgaaaaactgg
cacaatggcttgtctgcgcaaatcctcaatctcccggaataa
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