Osmerus eperlanus (European smelt): 134022291
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Entry
134022291 CDS
T10927
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134022291 (sorcs3b)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Others
Others
134022291 (sorcs3b)
Endosome - Lysosome transport
134022291 (sorcs3b)
Endosome - Golgi transport
134022291 (sorcs3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134022291
NCBI-ProteinID:
XP_062319686
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Position
6:13768500..13794582
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AA seq
1248 aa
AA seq
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MFCLGSVWHFCLFACLLTPIYPTIRAFVETSLPTRSPKTNVWHRVGVIASEKNTNTKTDK
VPKLNNHKSEFSRHPNMEPNENMPPKAEARANLDGVIGNEAHGSMEVVQRKGSKYSFVDF
RKYHRFFDVKNVENHTKLYDKIDGLTFARTKRSSGTKLAEDSDRSTFGETHSSERLLESV
HGLYGSRTEYRRTGDDARGTGSRQSEPHLVSSTVALFGDSAHNQAMVHWSGHNSSVILIL
TKLYDFNLGAVTESSLWRSVDFGSTYVKLNDKVGSRTVLSYLYVCPTNKRKIMMLSDPEL
ESSVLISSDEGATFEKFPVNFYIQSLLFHPAQENWILAYSHDSKLYSTMDFGRKWQLVHE
NVMPGRFYWAVMGLDRESDVVHIETRIAKGRAHYVKCRAQRCTEAYRQYLFPGHVDTNSL
VVQDEYVFVQVTKSGRASYFVSYMGESFQQMKLPKYCLPKDMHIISTDEKQVFAAVQEWN
QNNTYSLYISDPSGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMFLANKLVEHQVKS
FITYNKGQTWALLPAPDTDVAGNNLHCVLPFCSLHLHLEMSENPYTSGRISSKDLAPGII
VATGNIGTELSSTNLGMFITSDAGNSWRQIFEEEHNVWFLDNGGALLAVLHATAPIRHLW
ISLDEGKKWDRHSFSLAPLFVDGVLMEPESENHIITFFGHFSHRSEWQLIKIDYKGIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQIYMKRRPGNRCMLTQDYSRVSSSEPCLCRAYDFEC
DYGYERQANGKCSSAFWFDPNTATKSCSTSQSYLNSTGYRKVLSNNCKEGGKEVFSPRKQ
PCLPRPPQGLRLATSQGELMAPVGSNVTFLVHLEDGDSPRTNIQLDFGDGITVTYSNLSR
TDDGIKHTYKSAGIYRVTTHAENSQGSVTSSLFLHITSPVERVHLSAPIVAIRRKEANLT
AVVWPSQSRTVTFFWWFENSSEPIITLEGSISYTFAREGMTKVTVQVSSGGFILQDTKVI
AVKEFFKSLLLSFSPMLDEHNPDIPEWREDVGRVVRTALSQVSGFPEEQLLVALSPGLPT
AAELFILPDSHTPPEHRKKSEEALVSISDILVNALNQGLIQFELKADTRIIVYITQLTLA
PLVDSNPIHNSSAMLMLLSVVFVGLAAFFIYKFKRKIPWIHVQTEDSHEKEPEVIGTVGQ
NDNMSKVKLSEFSSPKEIMEKDLEARSRGMARNVERVITREFPNCTNV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcttgggttctgtttggcatttctgtctttttgcttgtcttttgactcctatt
taccccacaataagagcatttgtggaaacaagtttgccaacacgttcccctaaaacgaac
gtttggcatcgtgtgggagtaattgcttcggaaaaaaatacaaatacaaaaacagacaaa
gtccctaaactgaacaaccacaaatcagaattttcgagacatccaaatatggagccaaat
gaaaatatgcctccaaaagctgaagctcgagcaaacttagatggagtaattgggaatgaa
gcacacggctctatggaagtcgtccaaagaaaaggttccaagtattctttcgtggatttc
agaaagtaccatcgtttctttgacgtaaaaaatgtggaaaatcacacaaagttatatgac
aaaatcgatggccttacatttgcgaggacaaaacgaagttcgggtacaaaactggcagag
gattcggataggagtacatttggagagacgcattcaagtgagcggcttttggagtcagtg
catggtctttacggatcgaggaccgaataccggcgtaccggagatgatgctagagggact
ggctcgaggcaaagtgagccgcatctggtcagctccactgtcgctcttttcggagactca
gcgcataaccaagcgatggtgcactggtccggacacaacagcagcgtcatcctgatcctg
accaagctttatgacttcaacctgggagctgtcacagagagctctctctggagatctgtg
gactttggaagcacttacgtaaagctgaacgacaaagttggttcacggacagttctgagt
tatctttatgtctgtccaactaacaagagaaagataatgatgcttagcgacccagagctc
gagagcagcgtactcatcagctcagacgaaggagcaacttttgagaagtttccagttaac
ttctacattcagagtctgctttttcatccagcgcaagagaactggatactggcatacagt
cacgacagcaagttgtacagtacaatggactttggaagaaaatggcagcttgttcacgag
aatgtgatgcctggaagattctactgggcagtaatgggtctggacagagaatctgatgtg
gtccacatagagacccgtatcgccaaaggacgagctcactatgtaaagtgcagagctcaa
cgctgtacagaagcttacaggcagtacttattccccggtcatgtagacaccaactcactg
gtggtgcaggatgaatatgtgtttgtgcaggtgaccaaatccggacgagcaagctacttt
gtgtcttacatgggagaatcgtttcagcaaatgaaactgcctaaatactgtctacccaag
gacatgcacatcatcagcacagatgagaagcaggtatttgcagctgtccaggagtggaac
cagaacaacacctacagcttgtatatatccgatccttctggggtctacttcaccctgtct
ctggagaacttaaggaccagcagaggccctgccggcaacctcctggtcgacttttataag
gttgaagggataaatgggatgtttctagccaacaaactggtggaacaccaggtaaagagc
ttcatcacctacaacaaggggcaaacttgggccctgctgccagcccccgacactgatgta
gcaggaaacaacctccactgtgtcctgccattttgttctctgcatctgcacttggagatg
tctgagaacccgtacacctccgggcgcatctccagcaaagacctggcaccagggatcatc
gtagccacaggcaacattggtacagagctgtcctccaccaaccttgggatgtttataaca
tccgatgcggggaatagctggagacagatttttgaagaagaacacaacgtttggttcctt
gacaatggaggtgctttactggccgtcttacatgcaactgctcccattagacacttatgg
atcagcctggatgagggtaagaagtgggatcgccacagcttctccctggcccccctgttc
gtggacggagtcctgatggaacccgagtcagagaaccacatcatcacattcttcggccac
tttagccatcggtcagaatggcagctgataaagattgactacaagggcatcttcagcagg
agatgtatggatggagattaccagacatggcacttacacaacaagggagagccgtgtgtg
atgggcgagaagcagatctatatgaagcgtcggcctgggaaccgttgcatgctgacccag
gattactccagggtctcctcctcggagccatgcctctgcagagcctacgactttgagtgt
gactatggctacgaacgtcaagcaaacggaaagtgttcctccgctttttggtttgaccca
aacacggccacaaaaagctgtagcacgagtcagagttacctcaacagcaccggatacagg
aaggttttgtccaataactgcaaagaaggtgggaaggaggtgttctcacccaggaaacag
ccgtgtctccctcgaccgccccaaggcctccgattggctaccagtcagggggagctcatg
gctcctgtgggaagcaacgtgacattcctagtgcatctggaggacggagactcaccgagg
accaatatccagctggactttggggacgggatcacggtcacctactctaatctgagccgg
acggatgatggaatcaagcacacgtacaagtccgctgggatttacagagtaacgacccac
gcggaaaacagccagggctcggtcaccagctccttattcctgcacatcaccagtcccgtg
gagcgtgtgcatctgtcagctcccatagtggccatcaggagaaaggaggccaacctcaca
gcggtggtgtggcccagccagtccagaacagtaactttcttctggtggtttgagaacagc
tctgagccgataataaccttggagggaagcatctcgtatacgtttgcgagagaaggaatg
acaaaagtcacagtccaggtatcctctggaggcttcatactgcaggataccaaagtcatt
gctgttaaagagttcttcaaatctctgctgttgtcattctccccgatgcttgacgagcac
aatcctgacatcccagagtggagagaagatgtgggccgtgtagttaggacagctctatca
caggtgtctggttttcccgaggagcagctgctagtggcgttgtctcctggccttcccaca
gcagcagaactgttcatcctgcctgactcgcacacaccgcctgaacacaggaagaagagc
gaagaggctttagtgagtatatcggacattcttgtaaacgcgctgaaccaaggcttgatc
cagtttgagttgaaagctgacactcggatcatcgtttatatcacacagctgaccttggcg
cccctggttgactccaaccccatccacaacagctctgccatgctgatgctgctgtctgtg
gtgtttgtaggtttagccgccttcttcatctacaagttcaaaaggaaaattccctggatc
catgtgcagacagaggacagccacgagaaagagccagaagtgattggcacggtcggtcag
aatgacaacatgtccaaggtcaaactcagcgagttttcctcacccaaggagatcatggag
aaggacctggaggcgaggagcagaggaatggcccgtaatgtggagagagtgatcacaagg
gagtttcctaactgtactaatgtctga
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