Osmerus eperlanus (European smelt): 134022305
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Entry
134022305 CDS
T10927
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134022305
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134022305
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134022305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
134022305
NCBI-ProteinID:
XP_062319717
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All DBs
Position
6:14249368..14256636
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AA seq
758 aa
AA seq
DB search
MDIIGQGVRRKSQLMAQDIATAGEEYLEEKIGYDSDGDVASEENVEYDDVLELNQFDGLP
YSSRYYKLLKERTALPVWKAKSEFMETLVNRQFVMVSGTTKTGRSSQIPQWCAEFCLSVQ
YQNGMVVCTQIHKQQTVALALRVADEMDVNIGHEVGYSIPLETCCSSDTVLRYCTDDMLL
REMMSDPMLEQYGVIIIDQAHERTVSTDVLLGLLKDISLQRPELRVVVLTASHPGPKLLA
HWGSGSAPAPFIQLEGLAGGEAVHSSTAGASHKDYFCSALRLVLEIHRSQEGGDVVVFLA
TSQEIDLAQDILRREGPSLPTAQGELLPITMHPGPGCSLLVLGEGEEGRARRVFLTSSPN
EELFWAVDSIRFVIDAGVQRRCVYNPRIRTNSAVIRPISKSQAESRRQLAGKCFCLYPED
MPLANETWPHILESDITSTVLFLKRMEIAGLGHCDFIDRPDPEGLMQALEELDYLAALDD
DGNLSEMGIIMSELPLEPQMAKTLLASCEFDCVNEVVTIAAMLTVPSCFLVPSAELRPEA
AQCHMKFQHPEGDHFTLINIYKAFKQHQQEPNFCVEKWCQDLYLSLPALQTADALRSELM
ATLRRIELPVSMPAFGSRINTLNIKKALLAGFFMQVARDVDGSGNYFILNHKHVAQIHPL
SGYGTKIPKLGLPDWILFHQYSFSEDNCLRTVSHISPEEFIQMAPQYFFYNLPASESKDI
LQHILDHGAAHCKGKKTTSPTLETDSPEEQAYERCVIQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacataatcggacaaggagtgcgtcgtaaatcgcaattgatggcgcaggacattgca
acagcaggggaggagtatttggaagagaaaataggttacgattcagatggagatgtggca
agtgaagagaatgtggaatatgatgatgtattggaacttaatcaatttgatggactgcct
tattcctcacggtattataaattgctgaaggaaaggactgctctcccagtttggaaagcc
aagagtgagttcatggaaactttggtcaacagacagtttgttatggtcagcggcactacc
aaaacaggcagaagttctcagatccctcagtggtgtgcagagttctgcctctcagtccag
taccagaacggcatggtggtgtgtactcagatacacaagcagcagacagtggctttggcc
ctgcgggtggctgacgagatggacgtcaacattggtcatgaagtgggctacagcattccg
ttggagacatgctgctccagtgacactgtcctcaggtactgtacggacgacatgctgttg
agggagatgatgtccgaccccatgctggagcagtacggcgtcatcatcatcgaccaggcc
cacgagaggacggtcagcaccgacgtcctgctgggcctcctgaaagacatcagccttcag
aggccagagctgcgggtggtggtgctcaccgcctcccatcccggccctaagctgctggcc
cactggggctcaggctcagcgccggcccctttcatccagctggagggcctggctggagga
gaggcggtgcacagcagcactgctggggccagccacaaggactacttttgctccgcgctg
cgcctggtgctggagatccaccgctcgcaggaaggaggagatgtggtggtgttcctggcc
acctctcaggagatagatctagcccaggacatcctgcgtcgcgaggggcccagtctcccc
acagcccaaggggagctcctgcccatcaccatgcaccctgggccggggtgcagtctgctc
gtcctgggggagggggaggagggcagggccaggagggtcttcctcacctcgagcccaaat
gaggagctcttctgggctgtcgattcaatccgcttcgtcatcgatgctggggtccagaga
agatgcgtatacaaccccaggattaggactaactctgctgtcatacgtccaatcagtaag
agccaagcagagagtcggcggcagctggcaggaaaatgtttctgtctgtacccagaggac
atgcctctggccaatgagacatggccacacattctggagtctgacatcacttccactgtg
ctcttcctgaagaggatggagatcgccggtctgggccactgtgacttcatcgacagacct
gatccagaaggtctgatgcaggctctggaggagctggactacctggcagctctggatgac
gacggcaacctgtccgagatgggcatcatcatgtccgagttgcccctggagccccagatg
gccaagaccctgctggcctcctgcgagtttgactgtgtcaacgaggtggtcaccatcgct
gccatgttgacagttccttcctgcttcctggtcccctcggcggagctgcgtcctgaggct
gcccagtgccacatgaagttccagcaccctgaaggagaccacttcaccctcatcaacatc
tacaaggccttcaagcagcaccagcaggagccaaacttctgtgtggagaagtggtgccag
gacctctacctcagcctgcccgccctgcagacagccgatgccctccgctccgagctgatg
gccaccctgaggaggatcgagctgcccgtgtccatgccagccttcggctccaggatcaac
accctcaacatcaagaaggctctgctggcagggttcttcatgcaggtggcgagggatgtg
gacggatcggggaactactttattctgaaccacaaacacgtggcccagatccatcctctg
tccggctacggcaccaagatccccaaactgggcctgcccgactggatcctcttccaccag
tactccttctccgaggacaactgcctgcgtaccgtctcacacatctccccggaagagttc
attcagatggcaccacagtacttcttctacaacctgccagccagcgagagcaaggacatc
ctccagcacatcctggaccatggagctgcacactgcaaaggcaagaagacgaccagcccc
actctggagacggactccccggaggaacaggcctacgagagatgtgtcatacagtaa
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