Osmerus eperlanus (European smelt): 134022356
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Entry
134022356 CDS
T10927
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oep03037
]
134022356 (cfap43)
Cilium and associated proteins [BR:
oep03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
134022356 (cfap43)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML
WD40_Prp19
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
CFAP43_N
Beta-prop_RSE1_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
134022356
NCBI-ProteinID:
XP_062319806
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Position
6:14926342..14937242
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AA seq
1669 aa
AA seq
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MDVLGNLEVRWAQGLTHQNVEFVDKKTVCYICGNYIVFLDMKTKNRNVLQSPGRGIGTVT
ANSNCRTLAFSEQRLNPSIFVYNYPGLGLKNELKGTAKLSYTSIALSDAGPYLACCSSLP
DHTITVWNWETGSQICKQSQAVMGITSLIFNPLNWLQICAVGAASLTVWNIEKSDNFHIM
KPGVIDLPATDGTLVERESNPSHVPNGKLTYFGPQMPNTAVAGLTGDKAACFVPMKWIRS
RLSPSAVCWTASSELYVGCKEGFLLQVDPESLSITVLFSPTAAGDVTDLKEGSFESFALH
KHGLFVSGKESLLRCLKIKGDHVEVTQHWNLDEPASTITFSPDYDTLMLTSHTGRIYKYE
PTKSEKVVNVLDVLSGNFVAAASLYTERNVCVSVRDSGEMQVWSLDDGICIGTLSLQVKV
SSLACCPTAQYVAVGTFSGHILLIELTREQEPRLVHRVHLYNAPVDHLVFDQGGHFLFTG
ASDSLIYVLDSKPSKKFEIIGYTGVHGPVVSMSTQYNRDSKQVRLLVLCAGVKDTSQGCG
EGSLLTLLTLPVQKLTEGAKCADLRGSLSDDIVKSCTYKVPHSLSSSVLGTNKIFAYCHK
KKTLQRFPIPESTERSPDQELDQISPDKEVEGHPLGPASVLLSPHQNWLASVGKDGLLRI
RDISSLERYVQMQCHSCWLDGIRAVAFTSDSQTLITAGLRDGSLVCTRLKFKTTGASKGN
AATQYSQSMAKSLESVVTLENPVLSQMADWSSGVLSPTGSADLLEVEASDKRQPVDVTEQ
DESYTNLPLATDSTWLDNKLEAVIKEESQQFSETKKKLRKRVKQLRDTIQGMMRENESLP
DMERLEPQEFNLDVEEQKRLQAEGEQEVTRVRNEIELENLSKCYLRDVLKRECWDSMKVK
GQAIKAFHSDHEVKNYPMKERTQKELEELERVQCIRKIENTDCNLQQEILETKSRNPVEK
EEEEEEEGHETESAVHTGSLSAQFGGSNPFLYNQFSLHIREQKINQLTLLQDVIYKVKTA
FNTEFLAVYKQKEQEMNRVKDKNRRIVEIMAELDLKEKLWESSLSDNERPERALTVQDSE
IQVEKYLSPEQRAMNEEKQKAEEQRRLAAKVDNIRDRALDDMMGGVLELKKEDILKMEVP
PPEFILSKSDIQWTEEEKKIHKDYEKKAKELSEEKEKYRKTLETEMKKLQTSIKEATQGF
DDTLTKLFERKVKTEMVIYQEELKIANLVHSLLIEEEMLNRERELNVKLEKARIYKNDIG
EELNRHKEDVELFRDSYDNVVAEDKILDRGFRKEFMDVPGHVVDHLYKLYKRRPRVQRIR
TQAENSTSPFKENLGPESGRAAAEGLCQMMKAMEELDTPENMPDGLDPSVWERFCLARRA
KVESEQQVKMKALTLAEMQAFLQKRIDEDESAKMEIKNLIDDVNGLREEKMRFRLDIMVQ
ILMKQGQVEVEPGDFIADYSDSLLLPRNVVEDLNGTIRALGEQKIAKMVECKDFRKGIIQ
QEWEHKRMRMQMEDLNTKARDIQMLRVSQELQEYLSETDHDNRMSKKVSTLEKTITLQEK
THTKNVENCKKIIKQLKRQVALKTEKNSILNQQLTVMQVTVAERMHLYEATAMEENKASD
AEERYQDIIQRKKLMDLARQQAEELAILRAEVERMRKKTFPALANLKHE
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggatgtactggggaatttagaagtcaggtgggcacagggattgacacatcaaaatgtt
gaatttgttgacaagaaaacagtgtgttacatctgtgggaattacatcgttttcctggac
atgaagaccaaaaatcgaaatgtgctgcaaagtcctggaagaggaataggtaccgtcact
gcaaatagcaattgtagaactctagcgttctctgagcaaaggctgaatccctccatattt
gtgtacaactacccaggacttgggttgaaaaacgaattaaagggaacagccaaactatcc
tacacttctatagccctaagtgatgctggtccatatttggcctgctgctcatcacttcca
gaccacaccataacagtatggaattgggagactggatctcaaatttgtaagcagtcacag
gctgtaatgggtataacatctttgatattcaaccctctgaactggcttcagatttgtgct
gtgggggctgcatccctaactgtttggaacattgagaagagtgacaactttcatatcatg
aaaccaggtgtgatagatctccctgctactgatggcacccttgtggagagggagtcgaac
ccctctcatgttcccaacggcaaactcacctactttggccctcagatgcctaatactgca
gtcgcagggctgacaggagacaaggcagcatgttttgtgcctatgaagtggatcaggagc
agactaagccctagtgctgtctgctggacagcttcttcagaactttatgtgggatgtaag
gaaggttttctgttgcaggtcgacccagagtctctctccatcactgtcctgttcagcccc
acagctgctggagatgtaaccgatctaaaagagggaagctttgaaagctttgctctacat
aaacatggactctttgtttcaggaaaggagagtctgttacgctgcttgaaaatcaaaggt
gaccacgttgaggtcacacaacattggaatttagatgaaccagcctcaaccatcacattc
tcccctgactatgatacacttatgttaacatctcatactgggcgcatctacaagtacgaa
cccacaaagtcagagaaggtggttaatgttctggatgtgctcagtggcaactttgtggcg
gcagcttcgctgtacacagagagaaacgtctgtgtgtcggtgagggactcaggagagatg
caagtgtggtctctagatgatggcatttgcatcggaaccttatctcttcaagtaaaggtg
agcagcttggcctgttgccccacagcacaatacgttgccgtgggaacattttcgggtcac
atcctgttaatcgagcttaccagggagcaggagcctcgcctggtccacagggtccacctc
tacaacgctccagtagaccacctagtctttgaccagggaggacatttcctcttcactggt
gcctctgactccctaatctatgtactggactcaaagccatccaagaagtttgaaatcatc
ggctacacaggtgtccacgggccggtggtctccatgtctacccagtacaaccgggacagc
aagcaggtgaggctgctggtcctgtgtgctggagtgaaggacaccagtcaaggctgtggg
gagggcagcctgcttactctgctcacactgcccgtacagaagctcacagagggagcaaag
tgtgcagacctacggggttccctgtctgatgacatcgtaaagagctgcacctacaaggtc
cctcactcactcagctcatcagtcctggggaccaataagatctttgcttactgccacaag
aaaaaaactctgcagagatttccgattcctgagagcactgagaggtcacctgaccaggaa
ctggaccagataagtcctgataaggaggtggaaggtcatcctctaggtcctgcgtctgtt
ctgctgtcaccccaccagaactggctagcgtctgtaggcaaggatggcctgctgcgcatt
agggatatctcaagcctggagcggtatgttcagatgcagtgtcattcttgttggctggac
ggtatcagagcagtggccttcacctctgacagtcagactctgatcactgcaggcctcaga
gacggctctctggtctgtaccaggctcaagttcaaaaccactggagctagcaaaggcaat
gcagctacccaatacagccagtccatggctaagtctctggagagtgttgtgacattagag
aaccctgtcctcagtcagatggctgactggagctcaggtgtattgtctcccactggctca
gctgacctacttgaagttgaggccagtgacaagagacagccggtggatgtaaccgagcag
gatgagagttacaccaacctgcccctggccacagactccacctggttggacaacaaactg
gaagcggtcatcaaggaagagagtcagcaattctctgagacgaagaagaagctgaggaaa
agagtcaaacagttgcgagacaccatccaggggatgatgcgtgagaacgagagccttccc
gacatggagcgcctggaaccgcaggaattcaacctggatgtggaggagcagaagaggctg
caggctgagggggagcaggaggtcaccagggtccgaaatgagatagagctggagaacctt
tccaaatgctacttgcgtgatgtcctcaagagagagtgttgggattccatgaaggtcaaa
gggcaagctatcaaggccttccactctgaccacgaggtgaagaactaccccatgaaggag
cgcacacaaaaggagctcgaggaacttgaaagggtgcagtgtattaggaagatcgaaaac
acagactgcaatctccaacaggagattctggagacgaagagcaggaaccctgtggaaaaa
gaggaagaggaggaagaggagggacacgagacagagagcgccgttcacacaggaagtctg
agcgctcaatttggaggttcaaaccccttcctctacaaccaattcagcctgcacatcaga
gagcagaagatcaaccagctaaccctgctccaggatgtgatctacaaagtaaagacggcc
ttcaacaccgagtttctggcggtgtacaagcaaaaggagcaggagatgaaccgcgtgaag
gataagaaccgacgtatcgtggagatcatggctgagctggatctgaaagagaagctatgg
gagtcgagcctgtcagacaacgaacgtcctgagagggcgctcactgtacaggactctgag
attcaagtagagaagtacctctccccggagcagagggcgatgaatgaggagaaacaaaag
gcagaggaacaaagacgcctggctgctaaggtcgacaacatcagagacagagctctggat
gacatgatgggtggagtgcttgagctgaaaaaagaggacatcctgaaaatggaggtcccg
ccgcctgagttcatcttgtccaagtcagacatccagtggactgaggaggagaaaaagatc
cacaaagactatgagaaaaaagcaaaggagctgagcgaggaaaaggagaaatacagaaag
accttggagactgaaatgaagaaactacagacatctatcaaagaagccacccagggcttt
gatgataccttgactaagctgtttgagaggaaggttaaaactgagatggttatttaccag
gaggagctgaaaattgccaaccttgttcactcccttctcattgaggaagagatgctcaat
cgtgagagagagctcaacgtgaaactagaaaaggctcgaatttacaagaatgatattgga
gaagagcttaacagacacaaagaggatgtggagctcttccgtgactcttatgacaacgtt
gtagcagaagataaaattctggataggggattcaggaaggagttcatggatgtgccaggt
catgttgttgatcatttgtacaagctttacaagcgcagacccagggtccagaggataagg
acccaggcagagaacagcaccagcccttttaaagaaaaccttgggcctgagtcaggccgt
gcagcggctgaggggctctgccagatgatgaaggccatggaagaactggacactccagag
aacatgcctgacggcctggacccctctgtgtgggagaggttctgcctagcccgcagagcc
aaggtggaaagtgaacagcaggtgaaaatgaaggctttgactctagctgaaatgcaagct
ttcctgcagaagaggattgatgaggatgaaagtgcaaagatggagataaaaaaccttatc
gacgatgtcaatggcctgcgtgaggagaaaatgcgtttccgtctggacatcatggtccag
attctgatgaagcagggccaggtggaggtggagccgggagacttcatcgctgactactct
gattccctgctgctccccaggaatgtggtggaggacctcaatggcaccatcagggctttg
ggagagcaaaagatagccaagatggttgagtgtaaggacttccgtaagggcatcattcag
caagagtgggaacacaagaggatgcggatgcagatggaggacctgaacaccaaggccagg
gacatccagatgctgcgtgtctcacaggagctacaggagtatctcagtgagacagaccat
gacaatcgaatgtcaaaaaaggtttcaactttggagaaaacaataactttacaggaaaag
acccacacaaagaatgtagaaaactgcaagaaaataatcaagcagctgaagagacaagtg
gcactgaagacagagaagaattccattttgaaccagcagctgactgtcatgcaagtgact
gtggctgaaagaatgcacctttatgaggctacagccatggaggagaacaaggcaagcgat
gctgaggagcgctatcaggacatcatccagaggaagaagctgatggacctggccaggcag
caggccgaggagctagccatccttagggccgaggtggagcgcatgagaaagaaaaccttc
ccagcacttgctaacctcaaacatgaataa
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