Osmerus eperlanus (European smelt): 134022397
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Entry
134022397 CDS
T10927
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134022397 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oep04030
]
134022397 (valopa)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134022397 (valopa)
G protein-coupled receptors [BR:
oep04030
]
Rhodopsin family
Vision
Opsin
134022397 (valopa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7tm_4
Motif
Other DBs
NCBI-GeneID:
134022397
NCBI-ProteinID:
XP_062319865
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All DBs
Position
6:16011993..16020806
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AA seq
387 aa
AA seq
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MDTLRISVNGVSYTEATEILKPEDPFTGPLSNIAPWNFTFLAVLMFFVSFLSLCENFTVM
FVTFKFKQLRQPLNYIIVNLSIADFLVSLSGGLISFLTNAKGYFFLGKWACVLEGFAVTY
FGIVAMWSLSVLAFERFFVICRPLGNIRLRGKHAVLGLLFVWTFSFIWTIPPVLGWSSYT
VSKIGTTCEPNWYSTKLSDRLYIITFFFTCFILPLGVIIYCYGKLLGKLRKVSHGRLGNV
RKPERQVTRMVVVMIVAFMVGWTPYAAFSIVVTACPHIYIDPRMAAIPAFFSKTAACYNP
VIYVFMNKQFRKCLIKLFTGKGTIPEGNLGQTSERPGITAESQTGEMSAIAARIPMDGTA
ATKSDEQPSECSSTAQLPIPENKVCPM
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatacattaagaatctcagtaaacggtgtttcatatactgaggcaacagagatcttg
aaaccagaagacccgtttactggtccactgagtaatatagcgccatggaatttcacattt
ttggccgtcttgatgttttttgtgtccttcctttcactgtgcgagaacttcactgtaatg
ttcgtgacttttaagttcaaacagctaagacaacccttgaactacatcatagttaattta
tctatcgcagatttccttgtgtccctctctggtgggctgattagctttttgacaaatgca
aagggttacttcttccttggaaaatgggcttgcgtgttggaaggatttgctgtcacctat
tttgggattgttgctatgtggtccctgtctgtcttggcctttgagcgcttcttcgtgatc
tgtcgtcccctcgggaacatacgactgagggggaagcatgcagtgctgggcctgctgttt
gtctggaccttttccttcatctggacgattcccccggtcctgggctggagcagctacact
gtcagcaagatcggaaccacctgcgagcctaactggtactccaccaaactttcagaccgc
ctctacatcatcaccttctttttcacgtgcttcatactgccactgggggtgattatctac
tgttacgggaagctgctggggaagctgaggaaggtgtcccatggcaggctgggtaatgtc
aggaagccggagcgtcaggtgacaagaatggtggtggtgatgatcgtggccttcatggtg
ggctggacaccgtatgccgccttctctattgtggtcaccgcatgtccccacatctacatc
gacccccgcatggcagccatcccggcttttttctccaaaactgccgcctgctacaaccca
gtcatctatgtcttcatgaacaaacagttcaggaagtgcctgattaagctcttcaccggc
aaggggaccataccggaaggcaacctcggccagacctctgagcgaccgggtataaccgca
gaaagccagacgggcgagatgtcggctatcgcagcccgcatcccaatggatggcacagcg
gccaccaagtcagatgaacagcccagcgagtgtagctccactgcccagcttcccatccca
gaaaacaaagtgtgccccatgtag
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