Osmerus eperlanus (European smelt): 134022398
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Entry
134022398 CDS
T10927
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134022398
04082 Neuroactive ligand signaling
134022398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134022398
Ion channels [BR:
oep04040
]
Ligand-gated channels
GABA-A
134022398
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
YbhQ
Motif
Other DBs
NCBI-GeneID:
134022398
NCBI-ProteinID:
XP_062319866
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All DBs
Position
6:16091213..16113718
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AA seq
459 aa
AA seq
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MALFPSGGTVFVLLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNVNDVMFHWTRGNESVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPKLIFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTMHHPDSHLIMYGHPMRDFDEEMNGIVTTIAN
NANRAKRRKETPVAPTVAVPSEAGGAPSSPTGSEPKPEPPTEDPPNRCLSALALIRKVLR
SINCCHVENPHYIDNYSRVTFPLSFVMVNLLYWTYYLYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttccctccggaggaactgtgtttgttctactcctcattagcaggatgtta
gagaactctctgctcagcgctgaggttaaagagggagagattctgcctcctaccattcag
aagctgatgaaaggatacaataagtacctcaggcccttctttgacaatggccctgtaaca
gtgggtatgagtttggacattgccagcattgacaccatatccgagatcaacatggactac
acagccaccatcttcctgcgccagcgctggacggatgagcgtctggtgttcgagggcaac
aagagcctgagtctggacggccgtctggttgagctgctgtgggtgcccgacaccttcatc
gtggactccaagaagtccttcctccacgacatcacggtggagaacagactgatccgcatc
ttccccaacggaactgtcctgtacgccttgaggattaccaccacagtggcctgcaatatg
gatctgaccaaataccccatggacaagcagacttgcacactgcagttggaaagctggggc
tacaacgtcaacgatgtgatgtttcactggaccagagggaacgagtctgtgagtggtctg
gacactctgcgcctggcccagtacaccgtcgaagaccactacacctctgcttcagaggct
gtctatgaaactggaaactaccccaaactgatcttccactttgagctgaagaggagcatc
ctgtactttatcctggagacctacgtcccttccagcctgctggtggtcctctcctgggtc
tccttctggatcagccagtcgtctgttcctgcccggatctgtataggggtgaccacagtc
ctgaccatgaccacgctgatgatgggcgccaggacgtccctgcccaacgccaactgcttc
atcaaggccatcgacgtgtacctgggcatctgcttcagcttcatcttcggggcgttgatc
gagtacgccgtggcacatttctgtaccatgcaccacccagactcccacctcatcatgtac
ggccatccgatgcgtgactttgacgaggagatgaacggcatcgtcaccaccatcgccaac
aacgccaaccgggccaagaggcgcaaggagacccctgtcgcgcccaccgtggccgtgccc
tccgaggcggggggggctccctccagccccaccggcagcgagcccaagcccgagcccccc
accgaggacccccccaaccgctgcctgagcgccctggccctcatccgcaaggtcctgcgc
tccataaactgctgccacgtggaaaacccccactacatagacaactactcccgagtcacc
ttccccctctcatttgtcatggtcaacctgctctactggacgtactacctgtacttctaa
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