Osmerus eperlanus (European smelt): 134022437
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Entry
134022437 CDS
T10927
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134022437 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oep04990
]
134022437 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
134022437 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134022437
NCBI-ProteinID:
XP_062319947
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All DBs
Position
6:16867863..16872235
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AA seq
320 aa
AA seq
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MPLRVVMQGPGPWGFRLVGGKDFEQPLTISRVTPSSKAAQANLCIGDMILAIDGEATEHM
THLQAQNKIKGCIEEMVLSVDRSESKMWSPLSSEEGKANPYKMNLASEPQEVKQIGSAHN
RSALPFAACGSKVVTNQYNSPSGLYSSQNIKDFNTTVDEAKTIASANESGSIPDPSKPGS
RPPIAADSEVYKMLQENQESDEPPRQSASFMVLQEILETGDPDKPSGFRSVRPPTTKMGS
SVGNADKIPICDKCGSGIVGMVVKLRDKFRHPECYICSDCEINLKQKGHFFVEDQIYCEK
HARERMTPPEGYDVVTVFPK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgagttgtcatgcaaggtcctggaccctggggattccgtctggttggtggg
aaggatttcgaacaaccattgactatctcacgggttaccccaagcagtaaagctgcccaa
gccaacctttgtattggggacatgatcctggccatagatggagaagctactgaacacatg
actcacctgcaagcacagaacaagattaagggatgcatagaagagatggtcctctctgta
gacaggtcagaatccaaaatgtggtctccgctctcatctgaggaaggaaaggccaatccc
tacaagatgaatcttgcatccgagccgcaggaggttaaacaaataggctccgcccacaac
aggagtgctctgccgtttgctgcatgcggttccaaggtggtcaccaatcagtacaatagt
ccatctgggctgtattcctcacaaaacatcaaggactttaacacgactgtggatgaggcc
aaaaccattgccagtgctaatgagtctgggagcatccctgatccatcaaagccaggcagt
cgcccaccaatagcagcagactccgaggtgtacaaaatgctgcaggagaaccaggagtca
gatgagcctcctcgacagtcagcctccttcatggtgctgcaggagattctggagactggt
gaccctgacaagccgtcaggattcaggagtgtgagaccacccacaacaaaaatgggttca
tcagtgggaaatgcagacaaaatacccatatgtgacaagtgtggatcagggattgtaggc
atggttgtcaagttgagggacaaattccgtcaccctgagtgctacatctgctctgactgc
gaaatcaacctgaaacagaagggacatttcttcgtcgaagaccagatttactgcgagaag
cacgcacgtgagcgcatgacccctcctgagggatacgatgtggtcaccgtcttcccaaag
tag
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