KEGG   Osmerus eperlanus (European smelt): 134022437
Entry
134022437         CDS       T10927                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oep00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134022437 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oep04990]
    134022437 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:oep04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   134022437 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 134022437
NCBI-ProteinID: XP_062319947
LinkDB
Position
6:16867863..16872235
AA seq 320 aa
MPLRVVMQGPGPWGFRLVGGKDFEQPLTISRVTPSSKAAQANLCIGDMILAIDGEATEHM
THLQAQNKIKGCIEEMVLSVDRSESKMWSPLSSEEGKANPYKMNLASEPQEVKQIGSAHN
RSALPFAACGSKVVTNQYNSPSGLYSSQNIKDFNTTVDEAKTIASANESGSIPDPSKPGS
RPPIAADSEVYKMLQENQESDEPPRQSASFMVLQEILETGDPDKPSGFRSVRPPTTKMGS
SVGNADKIPICDKCGSGIVGMVVKLRDKFRHPECYICSDCEINLKQKGHFFVEDQIYCEK
HARERMTPPEGYDVVTVFPK
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcctctgcgagttgtcatgcaaggtcctggaccctggggattccgtctggttggtggg
aaggatttcgaacaaccattgactatctcacgggttaccccaagcagtaaagctgcccaa
gccaacctttgtattggggacatgatcctggccatagatggagaagctactgaacacatg
actcacctgcaagcacagaacaagattaagggatgcatagaagagatggtcctctctgta
gacaggtcagaatccaaaatgtggtctccgctctcatctgaggaaggaaaggccaatccc
tacaagatgaatcttgcatccgagccgcaggaggttaaacaaataggctccgcccacaac
aggagtgctctgccgtttgctgcatgcggttccaaggtggtcaccaatcagtacaatagt
ccatctgggctgtattcctcacaaaacatcaaggactttaacacgactgtggatgaggcc
aaaaccattgccagtgctaatgagtctgggagcatccctgatccatcaaagccaggcagt
cgcccaccaatagcagcagactccgaggtgtacaaaatgctgcaggagaaccaggagtca
gatgagcctcctcgacagtcagcctccttcatggtgctgcaggagattctggagactggt
gaccctgacaagccgtcaggattcaggagtgtgagaccacccacaacaaaaatgggttca
tcagtgggaaatgcagacaaaatacccatatgtgacaagtgtggatcagggattgtaggc
atggttgtcaagttgagggacaaattccgtcaccctgagtgctacatctgctctgactgc
gaaatcaacctgaaacagaagggacatttcttcgtcgaagaccagatttactgcgagaag
cacgcacgtgagcgcatgacccctcctgagggatacgatgtggtcaccgtcttcccaaag
tag

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