Osmerus eperlanus (European smelt): 134022452
Help
Entry
134022452 CDS
T10927
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134022452 (herc4)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
HECT type E3
134022452 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
134022452
NCBI-ProteinID:
XP_062319975
LinkDB
All DBs
Position
6:complement(17010337..17018275)
AA seq
1046 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRRCDFFHGKQICDVGCGRRHTTFLLGDGTVYTCGC
NDLGQLGHEKSRKKPEQVVSLDAQNIVAVSCGESHTLALNDKGQIFAWGSGSDGQLGLNN
FEECVRVPRNIKSLSDVQIAQVACGYRHSHALSRGGQIYSWGQNRFGQLGLGMDGQGISS
PQIIQSLQGIPFAQISAGGAHSFALTLSGAVFGWGRNKFGQLGLNDNNDRHFPALLKSLR
SQRVIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTTNHEINPRKVFELMGNVVTQIA
CGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSSCNRKSPATVKGPWVTYNSPTPSDTDIEQ
DCYVVRIYAGGDQSFAHYSTLNGPNNVKTEDPRRHIYTLTPDLIQKWLSHTQGRLQPEIS
NEIDLVFSSASCFNGSFLATSHPDHYCTNGKCSGVDMNLARLLFHRVVQHDYPEITQQIA
ASLEKNLIPKLSNCPPDIEALRLYLTLPECPLFSDLNTYVTLAIPFAKALISLKEAPLKV
LGNWWSKFESPDFQRLVELYKDVVVYLLRMHKVGIPHSEQRVLTCFLDTSLKLLEVLHAV
NEKAGHIIQYDKFYIHELDDLIDIRNDYITWVQQQMYSVAQDSAVTLCRYPFVFDAQAKT
TLLQTDAVIQMQMAVDQAQRQNFSSMFLPVVESVNPCLILIVRRENIVGDTMEVLRKSKN
VDYKKPLKVIFVGEEAVDAGGVRKEFFLMIMRELLDPKYGMFRYYEESRLIWFANKTFED
IDLFHLIGVICGLAIYNLTIVELHFPVALYKKLLKRNPTLDDLKELMPDVGRSLQQLLDY
SEDDVEDTFCLNFTVTEENFGATEVLELIPNGIDICVNNTNRPEFVNAYVDYIFNRSVAS
LFESFFAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKSTEYKGEYWAEHPTIKF
FWEVFHDLPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEQYLPVAHTCFNLLDL
PKYSRRETLSEKLLQAIDHNQGFNLA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggaaatgcttcctttggtcagctaggtttaggaggaatcgatgaggaa
attgtggtggagccaagaagatgtgacttttttcatggaaagcagatttgtgatgtaggg
tgtggcagaaggcacaccacatttctgcttggtgatgggacagtgtacacctgtggctgc
aatgacctagggcagctgggacacgaaaagtctcgaaagaaaccagagcaagttgtgtcg
ctagatgcacaaaacattgttgcagtgtcatgtggcgagtctcatacccttgcattaaat
gacaaaggacaaatatttgcatggggctcgggatcggatggacaactgggccttaacaac
tttgaggaatgtgtccgtgtgcctagaaacatcaagagtttatcagatgtacaaattgct
caggtagcttgtggatatagacactcccatgctttgtccagaggtggtcaaatttactct
tggggacaaaatcgatttggacaactaggactgggaatggatggtcaaggcatttccagt
ccccaaatcattcagtctttacagggaattccatttgctcagatatcagcagggggtgct
cacagctttgcccttactctctcaggagctgtttttggttggggtcgtaacaagtttggt
caacttggtctcaatgataacaacgatcgacattttccagcccttcttaagtcccttagg
tcacagagagtcatttatatctgctgtggcgaggaccacacagcagcactaaccaaggaa
ggaggcgtgtttacatttggagcaggcgggtatggccagctgggacacaacactacaaat
catgagatcaaccccaggaaggtgtttgagctcatgggaaatgtagtcacacagatagcc
tgtggaaggcagcacacattggctttcatcccttcgtctggaaagatagattcgtttggc
cttggaggaaatgggcagctgggtacacgttcctcatgcaatagaaagagccctgccacg
gtaaaaggcccatgggtgacctacaatagcccaacaccttccgacacagacattgagcag
gattgttatgtggtaaggatctatgcaggaggggaccagagctttgcccactatagcact
ctgaatggccctaataatgtaaagacagaggaccctcgcaggcacatctacaccttgact
ccagatctcatccagaagtggctgagccacacacaaggaagactccaaccagagatctcc
aatgaaatcgaccttgttttctcctcagcaagttgcttcaacgggagcttcttggctaca
agccatccagatcactactgcacaaacggtaaatgttcaggggtggacatgaacttggca
cgcctcctatttcacagagttgttcaacatgattacccagaaataactcagcagattgca
gccagcctggagaaaaatctgattcccaaactgagtaactgtcctccagacatagaagct
ctgaggctctacctgacactgccagaatgtcctctcttcagtgaccttaacacatatgtg
accctcgcaatcccttttgccaaagccctcatcagtcttaaagaggctcctttaaaggtg
ctaggtaattggtggtccaagtttgagtctccagacttccagaggctagtggaactgtac
aaagatgtggtggtgtacctgctcagaatgcacaaggttgggatcccacactcagagcag
agggtcctcacctgctttctggacacatccctcaaactcctagaggtccttcatgctgta
aatgagaaggctggccatatcatacaatatgacaagttctacattcatgagttggatgac
cttatagacatcagaaatgactacatcacatgggtgcagcagcagatgtattctgtggct
caggatagtgctgtcaccctgtgcaggtacccgtttgtgtttgatgcccaggcaaagacc
accctgcttcagactgacgctgttatacaaatgcagatggcagtagaccaggctcagcga
cagaacttcagctccatgtttctgccggtggtggaatctgtcaacccgtgcctcatcctt
atcgtacgcagggagaacattgttggagacactatggaggtcctgaggaagtccaaaaat
gttgactacaagaaaccccttaaggtgatctttgttggagaggaggcagttgatgctggt
ggtgtgcggaaagagttcttccttatgatcatgagggagcttctggaccccaagtacgga
atgttcagatactatgaggagtcccgtttgatttggttcgcaaacaagacctttgaggac
attgacttgttccacctcatcggtgtcatctgtgggttggccatatacaacctcacaatt
gtggagctccactttccagtggccctttataagaagctcttaaagaggaacccaactttg
gatgatcttaaagagctaatgccagatgtaggaaggagtctacaacagttgctggactac
tcagaggatgatgtggaagacacattctgcttgaatttcactgttactgaggaaaacttt
ggtgccactgaggtgttggaactcattccaaatggcatagatatctgtgtgaacaacaca
aacaggccggagtttgtgaatgcatacgtggactacatctttaaccggtctgtggcttca
cttttcgagtcattctttgcggggttccacaaagtgtgtggagggaaggttctagagctg
ttccagcctaatgaactgcaggccatggtcattggtaacaccaactacgactggaaagaa
cttgaaaagagcacagagtataagggagagtactgggctgagcaccctaccatcaagttc
ttctgggaggtgttccatgaccttcctttggaaaagaaaaagcagtttctcttgtttctc
acaggaagtgatcgcatcccaatccttggcatgaaaagtttgaagcttgtgattcagccc
acgggaggaggggagcaatacctgccagtggcacacacctgcttcaacctgctagacctt
cccaagtacagccgacgggagacactatctgaaaagcttctccaggctatagatcacaat
caaggtttcaacctcgcctaa
DBGET
integrated database retrieval system
