KEGG   Osmerus eperlanus (European smelt): 134022486
Entry
134022486         CDS       T10927                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    134022486 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oep03000]
    134022486 (tbp)
   03021 Transcription machinery [BR:oep03021]
    134022486 (tbp)
Transcription factors [BR:oep03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    134022486 (tbp)
Transcription machinery [BR:oep03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     134022486 (tbp)
  RNA polymerase III system
    TFIIIB
     134022486 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     134022486 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 134022486
NCBI-ProteinID: XP_062320034
LinkDB
Position
6:17220229..17223553
AA seq 298 aa
MDQNNSLPPFAQGLASPQGAMTPSLPIFSPMMPYGSGLTPQPVQNTNSLSLLEEQQRQQQ
ASAQQAGGIPGASGQTPQLYHSQAVTTTTNLPGNTPLYTTPLTPMTPVTPATPASESSGI
VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC
TGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFS
SYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
NT seq 897 nt   +upstreamnt  +downstreamnt
atggaccagaacaacagcctaccgccgtttgcccaggggctggcctctccacagggcgcc
atgacaccaagtctacccatcttcagtccaatgatgccatatggtagtggcctgacaccc
cagccggtccagaacaccaacagtctatctctcctggaggagcagcagaggcagcagcag
gcttcagcccagcaggctgggggcatcccgggtgcctcgggacagactccccagctgtac
cactcccaggcggtcactaccaccaccaacttgcctggcaatacccctctctacaccacc
ccactcacacccatgacccctgtcaccccagccacgccagcctctgagagctcaggcatt
gtaccccagctacaaaacattgtgtccactgtaaacctgggatgtaaattggacttgaag
accatagctctgcgagcaagaaatgctgaatacaaccccaagcgatttgctgctgtgatc
atgagaatacgagagccgaggaccacggccttaatcttcagctctgggaagatggtctgc
actggagcaaagagtgaggagcagtctcgtttggcagccaggaagtatgccagagtggtt
caaaaactgggtttcccagccaagttcctggacttcaaaatccagaacatggtgggcagc
tgtgatgtcaagttccccatccggttagagggcctagtactcacccatcagcagttcagc
agttatgagcctgagcttttccctgggctgatctacagaatgatcaagcccagaatcgtg
ttgttaatatttgtgtctgggaaggttgttttaacaggtgctaaagtgagagcagagatc
tacgaagcctttgaaaacatctaccccatcttgaaaggattccgtaagactacgtag

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