Osmerus eperlanus (European smelt): 134022486
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Entry
134022486 CDS
T10927
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134022486 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134022486 (tbp)
03021 Transcription machinery [BR:
oep03021
]
134022486 (tbp)
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
134022486 (tbp)
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134022486 (tbp)
RNA polymerase III system
TFIIIB
134022486 (tbp)
RNA polymerase I system
SL1/TIF-1B
134022486 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
134022486
NCBI-ProteinID:
XP_062320034
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All DBs
Position
6:17220229..17223553
Genome browser
AA seq
298 aa
AA seq
DB search
MDQNNSLPPFAQGLASPQGAMTPSLPIFSPMMPYGSGLTPQPVQNTNSLSLLEEQQRQQQ
ASAQQAGGIPGASGQTPQLYHSQAVTTTTNLPGNTPLYTTPLTPMTPVTPATPASESSGI
VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC
TGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFS
SYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagcctaccgccgtttgcccaggggctggcctctccacagggcgcc
atgacaccaagtctacccatcttcagtccaatgatgccatatggtagtggcctgacaccc
cagccggtccagaacaccaacagtctatctctcctggaggagcagcagaggcagcagcag
gcttcagcccagcaggctgggggcatcccgggtgcctcgggacagactccccagctgtac
cactcccaggcggtcactaccaccaccaacttgcctggcaatacccctctctacaccacc
ccactcacacccatgacccctgtcaccccagccacgccagcctctgagagctcaggcatt
gtaccccagctacaaaacattgtgtccactgtaaacctgggatgtaaattggacttgaag
accatagctctgcgagcaagaaatgctgaatacaaccccaagcgatttgctgctgtgatc
atgagaatacgagagccgaggaccacggccttaatcttcagctctgggaagatggtctgc
actggagcaaagagtgaggagcagtctcgtttggcagccaggaagtatgccagagtggtt
caaaaactgggtttcccagccaagttcctggacttcaaaatccagaacatggtgggcagc
tgtgatgtcaagttccccatccggttagagggcctagtactcacccatcagcagttcagc
agttatgagcctgagcttttccctgggctgatctacagaatgatcaagcccagaatcgtg
ttgttaatatttgtgtctgggaaggttgttttaacaggtgctaaagtgagagcagagatc
tacgaagcctttgaaaacatctaccccatcttgaaaggattccgtaagactacgtag
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