Osmerus eperlanus (European smelt): 134022563
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Entry
134022563 CDS
T10927
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04517
IgSF CAM signaling
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134022563
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134022563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134022563
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134022563
Intermediate filaments
Intermediate filament-binding proteins
134022563
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
134022563
NCBI-ProteinID:
XP_062320149
LinkDB
All DBs
Position
6:18298038..18360752
Genome browser
AA seq
2372 aa
AA seq
DB search
MELQRATSMPGPLSPGPLSPGSHSPRPLSPSPGLGASQDPSPGRGSSPLRSPSHSPLPGP
APGYSAQAAFNYNQLEGRFKQLQDEREAVQKKTFVKWVNSHLSRVSCRITDLYMDLRDGR
MLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKSAGYPNVNIHNFTTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLAEQHLGITKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANALVGVQQQLQAFNTYRTAEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFMPREG
KLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLQAVEAATKKHEAIETDIAAYEERVRAVVSVARELEAENYHDIKRITARKDNV
NRLWEYLLELLKARRLRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDL
LQKHALVEADIAIQADRVKAVNNNAQRFAVDAEGYKPCDPQVIRDRVAHMEFCYQELSQL
AAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDCGKDLTAAVRLLSQHKAFEDE
MIGRAGHLQQTVRQGEELVADNHFGSDKIKERIADIQEQWAGLERLSAVRKSRLQEACNH
HQFLTDADDIDAWMLDVLRIVSSADVGHDEFSTQALVKKHKDVAEEIASYRPVIDALHEQ
ARTLPEQQANSEEVQARLSGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWID
EKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEI
KAQQDKLNTRWSQFRDLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGN
DLAGVMALQRKLTGMERDLAAIEDKLGDLGKEAERLAAEHPDQAQGIMGRLGECTGVWDE
MKGTLKNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLTEAEKLLAQHEG
IKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAYQMFLRDTKQVEAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKIN
AVVDTGRRLVGDGNVNAERVQEKVDSIDKRHKKNREAASELLTKLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGQQLMTEKPE
TEPMVKEKLAALQKMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGLEGQIQSD
DYGKDLTSVNILLKKQQMLESQVEVRQREVQELQGQAQALSQEGKDSDEVDGQRRTVEKK
FQELQDPIMKRRDNLMASREIHQFNRDLEDEILWVEERMALATSTDHGNNLQTVQLLIKK
NQTLQKEIQGHQPRYDDIFERSQQVLRADSPNTDLIRQRLDDLQRLWAQMKAETENRHGR
LEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAET
VHQLSQTSRGLVAAEHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERLRLFQLNREV
DDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNQLADELIN
SGHADAATIAEWKDGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKK
LPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRTLQEDAVRLQSAYAGDKADDIQKREG
EVLEAWRVLLEACDGRRVKLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVE
LLMNNHQGIKAEIDARNDSFTTCIELGKALLARKHYASEEIKEKLLQLTDKRKDMIDKWE
DRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSREMGMNVDDVEKLIKRHEAFEKSAA
TWEERFSALERLTTMELLEVRRMQEEEEKKRQPPPAEASDAASTQQSREGEQVSQNGLPS
DQDSPRDNGEGSDIVNGVAEPSPGGSPSASRKGKASQAATLPAKTQDSTPSQMEGFLHRK
HEWEGHNKKASSRSWHNVYCVINSHEMGFYKDSRSASQGIPYHSEVPISLKDAVCEVALD
YKKKKHVFKLKVTDGNEYLFQAKDDEEMNLWIQAISTAVSSDRSEVTPSSHSTPAASRAQ
TLPASVAVAAESSPGKREKDKEKRFSLFSKKK
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagagggcgactagcatgcctgggcctctgtcccccggccccctctccccg
gggtcccattcccccaggcccctgtccccctcccctggcctcggggcctcccaggacccc
agccctggacgaggctccagccctctgcgcagccccagccacagccctctccctggccca
gcaccgggctacagcgctcaggccgccttcaactacaaccagctggagggacgctttaag
cagctgcaagacgagcgtgaggcggtgcagaagaagaccttcgtcaagtgggtgaactct
cacctgtccagagtgtcctgccgcatcacggacctgtacatggacctgagggatggacgc
atgctcatcaaactcctggaggtgctctccggagagagactgcccaaaccaactaaaggc
cgcatgcgtatccactgcctggagaacgtggacaaggccctgcagttcctcaaggagcag
agggttcacctggagaacatgggttctcatgacatcgtggacggaaaccaccgcctcacc
ctcggactcatctggaccatcatcctgcgcttccagatccaggacatcagtgtggagacg
gaggacaacaaggagaagaagtctgctaaggacgcgctgctcctctggtgccagatgaag
tctgcagggtaccccaacgtgaacatccacaacttcaccacaagctggagggacggcatg
gcctttaacgccctcatccacaaacacagaccggacctgattgactttgacaagctgaag
aaatctaacgcccaccacaacctccagaatgccttcaacctcgctgagcagcacctgggc
atcactaaactcctggacccagaggacatcagtgtagaccacccagatgagaagtccatc
atcacctacgttgtgacctactaccactacttctccaagatgaaggccctgaaagtggag
ggcaaacgcatcgggaaggtccttgacaacgccatcgagacggagaagatgattgagaag
tacgagtctctggcctcagatctgctggagtggatcgagcagaccatcatcatcctcaac
aaccgcaagtttgccaacgccctggtgggggtgcagcagcagctccaggccttcaacacc
taccgcacggccgagaagccccccaagttcacagagaaggggaatctggaggtgctgctc
ttcaccatccagagcaagatgagagccaacaaccagaaggtcttcatgccccgcgaaggc
aagctcatctctgacatcaacaaggcgtgggagcgcctggagaaggcggagcatgagcgc
gagctggctctgaggacggagctgattcgccaggagaagctggagcagctggcgcgccgc
ttcgaccgcaaggctgccatgagagaaacctggctgagtgaaaaccagcggctcgtctct
caggacaactttgggttcgacctgcaggcggtggaggccgccaccaagaagcacgaggcc
atcgagacggacatcgcggcctacgaggagcgcgtgcgggccgtggtgtccgtggccagg
gagctggaggcggagaactaccacgacatcaagcgcatcacggccaggaaggacaacgtg
aaccgcctgtgggagtacctgctggagctgctgaaggccagacgcctgaggctggagatg
aacctgggcctgcagagagtcttccaggagatgctgtacatcatggactggatggatgag
atgaagatgctgctgctgtcccaggactatgggaagcacctgctgggtgtggaggacctg
ctccagaagcacgccctggtggaggccgacatcgccatccaggccgaccgcgtcaaggcc
gtcaacaacaacgctcagaggttcgccgtcgacgccgagggctacaagccgtgcgacccc
caggtgatccgtgaccgcgtggcccacatggagttctgctaccaggagctgagccagctg
gccgccgagcgccgcgcccgcctggaggaatcccgccgcctgtggaagttcttctgggag
atggcggaggaggaaggctggatccgggagaaggagcagatcctgtcctccgaggactgc
gggaaggacctgacggcagccgtgcgtctgctgagccagcacaaggccttcgaggacgag
atgattggccgagccggacacctgcagcagaccgtgcgccagggggaggagctggtggcg
gacaaccacttcggctccgataagatcaaagagcgcatcgcggacatccaggagcagtgg
gcggggctggaacgcttgtcggcagtcaggaagtcccgcctccaggaggcctgcaaccat
caccagttcctgacggacgccgacgacatcgacgcctggatgctggacgtgctccgcatc
gtgtcgagcgccgacgtgggccacgacgagttctccacgcaggccctggtcaagaagcac
aaggacgtggccgaggagatcgccagctaccggcccgtcatcgacgctctgcacgaacag
gcccgcacgctgcccgaacagcaggccaactctgaggaggtgcaggcccgtctgtcgggc
atcgaggagcgctacaaggaggtggccgagctgacccgtctgaggaagcaggcactgcag
gacgctctggcgctctacaagatgttcagcgaggccgacgcctgcgaggtctggatcgac
gagaaggagcagtggctcaacagcatggagatacctgagaagttagaggacctggaggtc
gtacagcacaggtttgagagtctggagcccgagatgaacaaccaagcctctcgtgttgcc
gtggtgaaccagattgctaggcaactaatccacagtggtcaccccagtgagaaggagatc
aaagcccagcaggataaactcaacaccaggtggagccaattcagagacctggtggaccta
aagaaggactccttgaactccgctctgggcgtgcagaactaccacctggagtgcaacgaa
acaaagtcctggatccgcgagaagaccaaggtcatcgagtccacccaggagctgggcaac
gacctggcgggcgtcatggctctgcagcgcaagctcaccggcatggagcgcgacctggcc
gccatcgaggacaagctgggcgacctgggaaaggaggcggagcgcctggccgccgagcac
cccgaccaggcccagggcatcatgggaaggctgggcgagtgcacgggcgtgtgggacgag
atgaagggcacgctgaagaaccgtgaggagtctctgggtgaagccagcaagctgcagcag
ttcctgcgcgagctggacgacttccagtcctggctgtcgcgcacccagacggccatcgcc
tctgaggacatgcccaacaccctcaccgaagctgagaagctgctggctcagcacgagggc
atcaagaacgagatccggaactacgaggaggactaccagaagatgcgggacatgggggag
atggtgacgcagggccagacggacgcccagtacatgttcctccgtcagaggctgcaggcg
ctggacacgggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcc
cagtcccacgcctaccagatgttcctccgggacaccaaacaggttgaggccttcctcaac
aaccaggaatacgtcctggcccacacagagatgcccaccaccctggagggggcggagggg
gccatcaagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaac
gccgtggtggacacgggccgccggctggtgggcgacggcaacgtcaacgccgagcgcgtc
caggagaaggtggactccatcgataagaggcataagaagaaccgcgaggcagccagtgag
ctgctgacgaaactgaaggacaacagagacctgcagaagttcctccaggactgtcaggag
ctgtccctgtggatcaacgagaagatgctgacagcccaggacatgtcttacgacgaggcc
cggaacctccacagcaagtggctcaaacaccaggccttcatggctgaactgcagtccaac
aaggagtggctggacaagatcgagaaggacgggcaacagctgatgacagagaagccggag
actgagccaatggtgaaggagaagctggcagcgctccagaagatgtgggaggaccttgag
tcgaccacccagaccaaggccaagtgcttgtttgatgccaacaaggcggagcttttcacc
caaagctgcgctgacctggacaaatggctggttggcttggaaggccagatccaatcagac
gactacggcaaagacctgaccagcgtcaacatcctgctgaagaaacagcagatgctggag
agccaggtggaggtgcgtcagagggaggtgcaggagctgcagggccaggcgcaggccctg
agccaggaggggaaggactcggacgaggtggacggccagagacgcacggtggagaagaag
ttccaggagctgcaggaccccatcatgaagaggagggataacctgatggcgtcccgagag
atccaccagttcaacagggacttggaagatgaaatactgtgggtggaggagaggatggct
ctggctacgtccacagaccacgggaacaacctgcagaccgtccagctcctcatcaagaag
aaccagaccctccagaaggagatccagggccaccagccgcgctacgacgacatcttcgag
cgcagccagcaggtcctgcgcgccgacagccccaacaccgacctgatccgccagcgcctg
gacgacctgcagcgcctgtgggcccagatgaaggcggagacggagaatcgccacgggcgc
ctggaggaggcccacaaggcccagcagtactactttgacgctgccgaggccgaggcctgg
atgagtgagcaggagctgtacatgatgtcggaggagaaggccaaggatgaacagagctcc
gtggccatgctgaagaagcaccagatcctggagcaggcggtggaggactatgcagagact
gtgcaccagctctcccagaccagcaggggcctggtggccgcagagcaccccgagagcgag
cgtatcggcatgcgccagtcccaggtggacaagctgtatgccggcctgaaggacctgtca
gaggagaggcggggcaagttggacgagaggctccgcctctttcagctcaacagggaggtg
gatgatctggagcagtggatcgccgagcgcgaggttgtggccgggtcgcacgagctgggg
caggactatgaacacgtcacgatgctgcaggagcgtttccgggagttcgcccgcgacacg
ggcaacatcggccaggagcgcgtggacgccgtcaaccagctggccgacgagctcatcaac
tcgggccacgccgacgccgccaccatcgccgagtggaaggacgggctgaacgaggcgtgg
gcggacctgctcgagctgatcgacacgcgcacgcagatcctcgccgcctccttcgagctg
cacaagttctaccacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaag
cttccggaagagctgggccgggaccagaacacggtggagaccctgcagaggatgcacacc
accttcgagcacgacatccaggccttgggcacccaggtgcgcacgctgcaggaggacgcc
gtgcgtctgcagtcggcctacgccggggacaaggccgacgacatccagaagcgcgagggg
gaggtgctggaggcgtggcgcgtcctgctggaggcctgcgatggccgccgcgtcaagctg
ctggacacgggagacaagttccgcttcttcagcatggtccgagacctcatgctgtggatg
gaggacgtcatccgcctcatcgaggcccaggagaaacccagggatgtgtcgtccgtggag
ctgctgatgaacaaccaccagggcatcaaggcagagattgatgcccgcaacgacagcttc
accacctgcatcgagctgggcaaggccctgctagcacggaaacactacgcatcagaagag
atcaaagaaaagttgctccagctgacggataaaaggaaagacatgattgacaagtgggag
gacagatgggagtggcttagattggttctggaggtgcaccagttctcgcgggacgcaggc
gtagcggaggcgtggctgctgggccaggagccctacctgtccagcagggagatgggcatg
aacgtggacgatgtggagaagctcatcaagagacacgaggccttcgagaagtccgccgcc
acctgggaggagcgcttctccgccctggagcgactgaccacgatggagctactggaagta
agaagaatgcaagaggaagaagagaagaagaggcagcccccacctgcagaggcctctgac
gcagcctcgacacagcagagcagggagggcgagcaggtgtctcagaacgggctgccgtca
gaccaggactctccccgggataacggagaaggaagtgacatcgttaacggcgtggcagaa
cccagtcctggggggtctcccagcgccagccgcaagggcaaggccagtcaggctgccact
ctgcctgccaagacccaggactccaccccctcgcagatggagggcttcctccaccgcaaa
cacgagtgggaggggcataacaagaaggcctccagcaggtcctggcacaatgtgtactgt
gtgatcaacagccatgagatgggcttctacaaggacagcaggagtgccagtcagggcatc
ccctaccacagcgaggtgcccatcagcctcaaagacgctgtgtgcgaggttgcccttgac
tacaagaagaagaagcacgtgttcaagctcaaagttaccgatgggaatgagtatctcttc
caagccaaagatgatgaggagatgaacttgtggatccaggccatctccaccgccgtctcc
tctgataggtcagaggtcactccaagcagccatagcacccccgccgcaagccgcgcccag
accttacccgcctcggtcgccgtggcagccgagtccagcccaggcaaacgagagaaggac
aaggaaaaacgcttcagccttttcagcaaaaagaagtag
DBGET
integrated database retrieval system
