Osmerus eperlanus (European smelt): 134023121
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Entry
134023121 CDS
T10927
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134023121 (prdm1a)
BRITE hierarchy
Other DBs
NCBI-GeneID:
134023121
NCBI-ProteinID:
XP_062320947
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Position
7
AA seq
852 aa
AA seq
DB search
MCGWDQSFSATSHSSAMLTTEGAHTVEHDDDKMDTELHRNTETATDARSKMAAADPTMEE
ADMMRWTEAEFEEKCTYIVKDTPQEPSPDSEGLTRAEASLPRNLVFKHPASSTEVIGVCS
REYIPKGTRFGPLVGQCYTADSVCKDANRKYFWRIYSEGEFHHFVDGLEEEQSNWMRYVN
PAHSASEQNLAACQNGMEVYFYTVRPVAPGAELLVWYCPEFAQRLHYPPSGELMMQKLKQ
SLLEAKQQASEERIVSSTTQTPTPTPTPVKREHSVSSILRGTTSSSTNKREPSRPLATRP
RCSDSPERPLYPRPLYPPLRPHPHMAEDFLSLKTSPVQYGYPATRSPGNQSSATPCPSAR
SSPESSPQRSPAGHQHAAPPSGFYPRGLGPYPGYAPPAAPLSSPFYPQGHHYPRYLLPPH
YPLPGGGVPAVGGMFPRMYPLYSNLLPPHIPLLPSDAASRRFLMPDSIHPSSVSVHRDFL
LPAPTSAFSAATSLKDKAGPHHPYPGHGAPHRHPHAPSSGSPTAGTSPPSERVPTKPTST
SALLGSASSRSEEEAMNLSKMKRGGSGSAGYKTLPYPLKKQNGKIKYECNVCSKTFGQLS
NLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECTVCHKRFSSTSNLKT
HLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHSRERPHKCSHCHRHYVHLCSLRLHLKG
FCLAASSPSGSSATGPSTLRLGSSLDELQRANEEIERFDMSEHAERLDQLQGGVEMDAVL
EKQILGMLWREMDLKVSPYHPHHKGIPSELLSASYGLYESANETSVIKMCRSSPPPLLPA
NVTVKQESEEHA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttttcggcgacctctcatagctcggccatgttgactact
gagggggcccacaccgttgaacacgacgacgacaaaatggacaccgagctgcacaggaac
accgaaaccgccacggacgccagatctaaaatggccgccgccgaccccacgatggaagag
gccgacatgatgaggtggacggaggcagagttcgaggagaagtgcacctacattgtcaaa
gacacaccccaggagccgagtccagacagcgagggcctgacgagggccgaggcatcgctg
ccccgcaatctggtgttcaaacacccggcaagctccacagaggtgattggagtgtgcagc
agagagtacatacccaaaggaacccggttcggccccctggtgggccagtgctacactgca
gacagcgtctgcaaagacgccaacaggaagtacttctggcggatatactccgagggtgag
ttccaccactttgtggacggcctggaagaggagcagtccaactggatgcgctacgtcaac
ccggcccactcggccagcgagcagaacctggcggcgtgccagaacggcatggaggtctac
ttctacacggtgcggcccgttgcccctggcgctgagctcctggtgtggtactgccccgag
tttgcccagcgcctccactacccgccctccggagagctgatgatgcagaaactcaagcag
agtctactggaggccaagcagcaggccagcgaggaacgcatcgtcagcagcaccacccag
acacccacccccacccccaccccggtcaagagggagcacagcgtctcctccatcctccga
ggcaccacgtcgtcctccaccaacaagagggagcccagtcggcccctggccacacggccg
cgctgctctgacagccctgagaggcccctgtacccccggcccctctacccgcccctgcgg
cctcacccccacatggccgaggacttcctcagcctcaagaccagccccgttcagtacggc
tacccggccacccgttcccccggcaaccagtcgtcggccacgccctgcccgtcggcgagg
agtagcccggagagcagcccccaaagaagccccgccggccaccagcacgcagccccgccc
tctggtttctacccccgaggtctggggccctaccccggctacgcgccacctgccgccccc
ctgtcctcaccgttctatccccaaggccatcactacccccgctacctcctgcctcctcac
tacccgctgcctggcggcggcgttcccgccgtggggggcatgttccctcgcatgtacccg
ctctacagcaacctgctgcccccacacatccccctgctcccctccgacgccgcctccaga
cgcttcctcatgcccgactccatccatccttcctctgtctccgtccacagggacttcctc
ctccccgcccccaccagtgccttctcggccgccacctccctgaaggacaaggccggcccc
caccacccttacccgggtcacggggccccacacaggcaccctcacgccccctccagtggg
tcccccacagcgggtacctcgccccccagcgagagggtgcccaccaagcctacctcaacc
tcagccttgctgggcagtgccagcagccggtcggaggaggaagccatgaacctgagcaag
atgaagcgtggaggcagtggctccgcgggctacaagacacttccctacccgctcaagaag
cagaacggcaagatcaagtacgagtgcaacgtctgcagcaagactttcggacagctctcc
aacctcaaggtccacttgcgtgtccacagtggcgagcggcccttcaaatgtcagacgtgc
aacaaaggtttcacccagttggcccacctgcagaaacacttccttgtccacaccggagag
aagccccacgagtgcacggtgtgtcacaagcgcttcagtagcaccagcaacctgaagacc
cacctgcgcctccactctggagagaaaccctaccagtgcaagctgtgcccggccaagttc
acccagtttgtccacctcaagttgcacaagcgcctgcactcccgcgagcgcccccacaag
tgctcccactgccaccgccactacgttcacctgtgcagtctgcggctccacctcaagggc
ttctgcctggccgccagctccccctcaggcagctccgccacggggccttccaccctgagg
ctcggcagctccctggatgagctccagcgggccaacgaggagatcgagcgcttcgacatg
agcgagcatgcagagaggctggaccagctgcagggaggcgtggaaatggatgccgttctg
gagaaacagatcctgggcatgctgtggagggagatggacctgaaagtctccccttaccat
ccccaccacaaggggattcctagcgagctcctatccgccagttacggcctgtatgagtca
gcaaacgagacgtcggtcatcaaaatgtgtcggagcagtcctcctccgttgcttccggcc
aacgtcacggtcaagcaagagtcggaggaacacgcttaa
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