Osmerus eperlanus (European smelt): 134023221
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Entry
134023221 CDS
T10927
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134023221 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134023221 (ubr5)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134023221 (ubr5)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
HECT type E3
134023221 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
134023221
NCBI-ProteinID:
XP_062321141
LinkDB
All DBs
Position
7:15024572..15053709
Genome browser
AA seq
2913 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNYNSHPHLSLLEQATLKQCVVGPSHAGF
LLEDGRVCRISFAVQPDRLELSKPDGNDGSKLSSGSGTGRTPRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGGGGGGGGGGSGGGAGGGSGAGGGGGGGGGGGGGSGGGGGGG
GGGGSSGRSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQ
GKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHS
AHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLR
ERRWLDGASFDTERGSTSREGEPSLDKKSIPVQSPVSLGEDLQWWPDKDGVKFVSIGALF
SELVAVSSKGELYQWKWSEPEPYRNAQNPSIHHPRVSFLALANEKITLLSANSIRATVAT
ETNKVATWVDDTLMTVASKLEHSAQTFPELQGERIVSLHCCALYSCVQLDSSLYWWGVVP
FSQRKKMLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKV
GVLLESVWNMNDSCRFQLRSPESLKNMDKTTKTQEIKTESNKPELVKTEMGPPPSPASTC
SDTSSIASSASLPYKRRRSTPAPKEEEKVNEEQWPLKEVVFVEDVKNVPVGKVLKVDGAY
VAVKFPGTSSSVSSQSVVPSDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKK
LCIPEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSER
NVAVFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPIASLGMGVHSLANLPSN
STIKKKAAIIIMAVEKQTLMQHVLRCDYEACRQYLVNLEQAFLLDQGGQALGALLGHRCD
GNRNVLHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNR
TGSSSSRGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDG
DIDFILAPAVGSLTTASTGTSLGPSTSTIPGPSSEPSVVESKDRKANAHLILKLMCDSVV
LRPHLRQLLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGILEKEDADSVF
MEMICPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARV
CHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEH
ILLFLVQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQ
DWNALKSMIMFGSQENKDPLSASSRTAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPD
ITFIDTLLGTLVKELQNKYTAGRRDEAIVVTRRFLRSVARVFVILSVEMASSKKKNNFIP
QPIGKCRRVFQALLPYAVEELCNVAESLIVPVRMGVARPTAPFTLASTSIDAVQGSEELF
SVEPLPPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPARGRDEEQDDIVSADVEESYG
SPVCLCVCQVEVVEGVAGEEDHHDDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAET
ESDSESNHSNQDNASGRRSVVTAATAGSEAGSRVSLAFPMFGASSVPAFFSEDDSQSNDS
SDSDSSSSQSDDVENETFLIDEPLERTTSSSHANSAAQAPRSMQWAVRNTPSQRATGSTP
PSTSTPAASSTGLIYIDPSNLRRSSAISSSAAAAAAALEASNSSSYLTSASSLARAYSIV
IRQISDLMSLIPKYNHLVYSQYPAAVKLTYQDAVNLQNFVEDKLIPTWNWMVSIMDSTEA
QLRYGSALSSAGDPGHPSHPLHASQHSARRERMTAREEATLRTLEGRRRAATLLTARQGM
MSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTP
QIDRKRNREILELGLDNEDSEHENDEDTNQMLGVLACQERHGRKTVRLRRGRKKKASPKG
STLQDKDEDPVPAETGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNA
RKEDLFGRPSQGLYSSSSSYMASKGLAEASMDRNCLEVNMGSSLPSSQILPTKMSYSANL
KNVMSMASAQRGAEDQPMAEQEMEAPKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLPSF
RPHCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREM
EKLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKVTFKDEPGEGS
GVARSFYTAIALAFLSNDKLPNLDCVQSASKGMQASSTCHHDYNSNLMQRLRNRDRERER
RSGGLRAGSRRDRDRDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERLYPRVHA
MQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLL
EAPEKAQQAENRKRHGSTRSVVDMEMDDPDDGDDNAPLFYQPGKRGFYCPRPGKNTEARL
NCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHS
QAGEAEAVFAAMDLAFAIDLCKEEGAGQVELLAGGVNMPVTPLNVYEYVRKYAEHRMLVV
AEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENADK
LLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTAN
TCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatacacttcgtggttcacccgttgcccgggaccgaggatcagctcaatgac
aggctccgcgaagtctcagagaaacttaacaagtataactataacagtcatccacacctc
agtctgttggagcaggccacattgaaacaatgtgtggttggaccaagtcatgctggcttc
ctattagaggatggacgtgtttgcaggatcagctttgcagtccaacctgacagactggag
ctaagcaaaccagatggcaatgatggttcaaagttgagcagtggttcagggacaggaagg
acccccaggccaggcaggactagtgacccgccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctccggagtcaacggaggaggt
ggaggcggaggaggaggtggcggcagtggaggaggcgcagggggagggagcggagcaggg
ggtggagggggcgggggaggtggaggaggaggagggagcggaggaggggggggaggagga
ggagggggcggctcgtcggggcggtcctccactgctgcccgggactcgcgcagacagacc
agggtgatccggaccgggagggacaggggctccggcctcctgggcagccagccgcagccc
gtcatccccgcctccgtcatccccgaggaactcatctcccaggcccaggtcgtgctccag
gggaagtctcggagcgtgatcatccgagagctgcagcgcaccaaccttgacgtcaacctc
gccgtcaacaacctactgagccgcgacgacgaggatggagatgacggagatgacacggcc
agcgagtcctacctgcctggagaagacctgatgtctctgctggacgctgacatccactca
gcccaccccagcgtcatcatagacgccgacgccatgttctccgaggacatcagctacttc
ggctacccctccttccggcgctcctccctctcacgcctgggatcctcgcgagttctcctt
ctccccttagagcgcgactctgagctgctgcgcgagcgcgagtccgtcctgaggctgcgc
gagcggcgctggctggacggggcctcgttcgacaccgagcgaggctccaccagccgggag
ggggagcccagcctggacaagaaaagcatccccgtgcagagtcctgtctccctgggggag
gacctgcagtggtggcctgacaaggacggagtgaagtttgtgagcatcggggccttgttc
tccgagctggtggcggtcagctctaaaggggagctctaccagtggaagtggagcgaacca
gaaccgtacagaaacgcacagaacccctctatccaccacccccgtgtgtccttcctggcg
ctggccaatgagaaaatcaccctgctgtcggccaacagcatcagagccaccgtggccacg
gaaaccaacaaggtggccacctgggtggatgacaccctgatgacggtggcctccaagctg
gagcacagcgcccagaccttcccggagctgcagggggagcgcatcgtgtccctgcactgc
tgcgccctctacagctgcgtccagctagacagcagcctctactggtggggtgtcgtgcct
ttcagtcagaggaagaagatgctggagaaggctcgagccaaaaacaagaagccaaagtcc
agcgcaggcatttcctcaatccccaacatcacagtgggcactcaggtgtgcctgaggaac
aaccccctgtaccacgcgggcgccgtggccttctctgtcaacgcgggcatccccaaggtg
ggcgtcctgctggagtcggtctggaacatgaacgacagctgccgattccagctgcgctcc
cccgagagcctcaagaacatggacaagaccaccaagacccaggagatcaagacggagagc
aacaagcctgagctggtgaagacggagatggggccccctccctccccagcctccacctgc
agtgacacgtcctccattgctagcagtgcctcgctgccctacaagcggaggcgctccacc
cccgctcccaaagaggaagagaaggtgaacgaggagcagtggcccctcaaggaggtggtg
ttcgtggaggatgtcaagaacgtccccgtgggaaaggtgctgaaggtggatggggcatat
gttgctgtgaagtttcccgggacgtcgagcagcgtgagcagccagagcgtcgttccctcc
gactcagacccgtcctctctgctgcaggactgcaggctcctcagaatagacgagttacag
gttgttaaaacaggcggcacacctaaagttcccgattgctttcagcgcaccccgaaaaaa
ctctgcatcccagagaaagccgagatcctggctgtgaacgtcgactccaaaggagtccat
gccgtgttgaagacggggaactgggtgcggtattgcatctttgacctggccaccggcaag
gcggagcaggagaacaacttccccaccagtaacctggccttcctggggcagagcgagcgc
aacgtggccgtgttcaccgcgggccaggagtctcccatcatcctgagggatggcaacggc
accatttacccaatggccaaagactgcatgggcgggatccgagaccccgattggctggac
cttccgcccatcgccagcctgggcatgggcgtgcactccttggccaacctgccctccaac
tccaccatcaagaagaaggctgctatcatcatcatggcggtcgagaagcagacgctgatg
cagcacgtgctgcgctgcgactacgaggcctgccgccagtacctggtcaacctggagcag
gccttcctgctggaccaggggggccaggccctgggcgccctgctggggcaccgctgcgac
ggcaaccgcaacgtcctccacgcctgcgtctccgtctgtttccccgtcagcaacaaggag
accaaggaagaggaagaagctgaacggtccgagaggaacacgtttgcggagcgcctgtcg
gccgtggaggccatcgccaacgccatctccgtggtctccagcaacagctctgggaaccgc
acaggctcctccagcagcagagggctacgtctcagagagatgatgaggcgttctctgaga
gccgcaggactcggacgccacgagtctgggccctcgtccagcgaccaccaggaccccgtg
tctccgcccatagccccgcccagctgggtgcctgacccccctcctatggacccagatggt
gacattgacttcatcctggccccagctgtgggctccctcaccactgcctccaccgggacc
agcctaggacccagcacctccaccataccaggcccatcctcggagccgtctgtggtggag
tctaaggaccgcaaggccaacgcccacctcatcctcaagctgatgtgtgacagcgtggtc
ctgaggccacacctccgccagctgctctccgccaaggatgcccgtggaatgacccccttc
atgctggcggtcagcgggagggcataccctgccgccatcacggttttggaggcggcacaa
aagatggccaaggtgggtgaccctggcatactggagaaggaggatgcagactctgtgttt
atggagatgatctgcccctctgggaccaaccccgacgactctcctctctacgtcctctgc
tgcaacgacacctgcagcttcacctggaccggcgccgagcacatcaaccaggacatcttt
gagtgccggacctgcggcttgctggagtccctgtgctgctgtacagagtgtgccagggtc
tgtcacaagggacacgactgcaagctgaagaggacatcccccacagcctactgtgactgc
tgggagaagtgtaagtgtaagaccctgatcgctggccagaaggctgcccgcctggacctg
ctctaccggctcctcaccaccaccaacctggtcaccacgcccaacagcaggggggagcac
atcctcctcttcctggtccagactgttgctaggcagagtgtggaacactgccagtaccgg
cctccgcgaatcagagaggaccggaaccgcaaggcagccaatgccgaagactctgacatg
cccgaccatgacctggaacctccccgcttcgcccagctggccctggagagggttctgcag
gactggaacgccctcaagtccatgatcatgtttggctcccaggagaacaaagaccctctg
agtgccagcagcaggactgcccacctcctgccagaggagcaggtgtacctgaaccagcag
agcggcaccatccgtctggactgcttcacgcactgcctcattgtcaagtgtgcccctgac
atcaccttcatagacaccctgctggggaccctggtgaaggagctgcagaacaagtacacg
gccggacgcagggatgaggccatcgtggtcacccgcaggttcctgcgctccgtggcccgg
gtcttcgtcatcctcagcgtggagatggcctcgtccaaaaagaaaaataacttcatcccc
cagcccattgggaagtgccggcgtgtgttccaggccctgctgccctacgccgtggaggag
ctctgcaacgtggccgagtctctgatcgtgcccgtgcgcatgggcgtggcccggcccacc
gcccccttcaccctggccagcaccagcatcgacgccgtgcagggcagcgaggagctcttc
tccgtggagcccctgcccccccggccctccccggaccagtccagcaattctagtcagaca
gcatcttcctacatcatcagaaaccctcagccccgccgcagcagccaatcccagccggcc
agggggcgggacgaggagcaggacgacattgtgtccgcagacgtggaggagagctatggg
tcaccggtgtgtctgtgtgtctgtcaggtggaggtggtcgaaggggtggcgggggaggag
gatcaccacgacgaccaggaggagcagggggaggagaacgccgaggcggaggggcagcat
gacgagcacgacgaagatgggagcgacatggagctggacctgctcgcagccgccgagacg
gagagcgacagcgagagtaaccatagcaaccaggacaacgccagcgggcgcaggagtgtg
gtcaccgcggcaacggccggctccgaagcaggaagtagggtctccctggcatttcctatg
tttggcgccagcagcgtccccgccttcttctccgaggacgactcccagtccaacgactcg
agcgactcggacagcagcagcagccagagcgacgacgtggaaaacgagaccttcctgatc
gacgagccgctggagcggaccaccagctcctcccacgccaacagcgccgcccaggcgccg
cgctccatgcagtgggccgtgaggaacacccccagccagagggccacaggcagcaccccc
cccagcacctccacgcctgccgcgagctccacagggctgatctacatcgacccgtccaac
ctgcggcggagctcggccatcagctcgtcggcggcggcggctgcggccgccctggaggcg
agcaactccagcagctacctgacctcggccagcagcctggcccgcgcctacagcatcgtc
atccgccagatctccgacctcatgagtctcatccccaagtacaaccacctggtgtactcc
cagtaccctgccgccgtcaagctcacctaccaggacgccgtcaacctgcagaatttcgtg
gaagacaagctgatccccacctggaactggatggtgtccatcatggactccaccgaggcc
cagctgcgctacggctcggcgctgtcgtccgccggcgacccgggccacccctcccacccg
ctccacgcctcgcagcactcggcccgcagggagcgcatgacggcccgcgaggaggccacc
ctgcgcacgctggagggacgcaggcgagcggccaccctgctgacggcgcgccaggggatg
atgtcggcgcgcggggacttcctgaactacgccctgtccctgatgcgctcgcacaacgac
gagcactcggacgtgctgcccgtgctggacgtgtgctcgctcaagcacgtggcctacgtc
ttccaggcgctcatctactggatcaaggccatgaaccagcagaccaccctggacacgccc
cagatagaccggaagagaaaccgggagattctggagttgggtttggacaacgaggattcc
gagcacgagaatgacgaggacaccaatcagatgttaggggttctggcctgtcaggaaaga
cacggaagaaagacagttagactgagacgaggcaggaagaagaaagcatctcctaaaggc
tccaccctccaagacaaagacgaggacccggtcccggcagagacgggtcagaaccacccg
ttcttccgccgctccgactccatgaccttcctgggctgcatcccccccaaccccttcgag
gtccccctggccgaggccatccccctggccgaccagccgcacctcctgcagcccaatgcc
aggaaggaggatctgtttggccgccccagtcagggcctgtactcctcctcctcctcttac
atggccagtaagggcctggccgaggccagcatggacaggaactgcctggaggtaaacatg
ggctcctctctcccctcctctcagatcctgcccaccaagatgtcctactctgccaatttg
aagaacgtgatgagcatggcgagcgcccagcgcggcgccgaggaccagcccatggcagag
caggagatggaggccccgaagcccggcccctccccccacgacctggccgcccagctcaag
agcagcctgttggctgagattggcctgaccgagagcgatggaccgcccctcccctctttc
aggccccactgtagcttcatggggatggtgatctcccatgacatgctcctgggccgctgg
cgtctgtctctggagctgttcggtcgcgtcttcatggaggacgtcggcgccgagcctgga
tcgatcctgacggagctgggcggcttcgaggtgaaggagtccaagttccgccgcgagatg
gagaagctgcggaacctgcagtcccgcgacctggccctggaggtggaccgcgaccgcgac
cagctcatccagcagaccatgcggcagctcaacacccacttcggccgccggtgcaccacc
acgcccatggcggtgcaccgcgtcaaggtcaccttcaaggacgagccgggcgagggcagc
ggcgtggcgcggagcttctacacggccatcgccctggccttcctgtccaacgacaagctg
cccaacctggactgtgtgcagagcgccagcaagggcatgcaggccagcagtacgtgtcat
cacgattacaactcaaatctgatgcagcgtctgaggaacagggaccgggagagggagagg
aggagcggtgggctgagggcaggctccaggagagacagagacagggactccaggaggcag
ctgtccatcgacactcggcccttcaggccggcttccgaggggaaccccagcgacgagccc
gaccccctgcctgcccacagacaggccctgggggagaggctgtacccccgcgtccacgcc
atgcagccggcgtttgccagtaagatcacggggatgctgctggagctgtcccctgcccag
ctgctgctgctgctggccagcgaggactccctcagggcccgcgtggaggaggccatggag
ctgctcattgctcacggaagggaaaacggagcagacagcatactggatctggggctgctg
gaggcccctgagaaagcacaacaggcagagaaccgcaagcgccacggttccacccgcagt
gttgtcgacatggagatggacgaccctgacgacggcgacgacaacgcccccctgttctac
cagcccggcaagagagggttctactgccccaggcccggcaagaacaccgaggcccgcctc
aactgcttccggaacatcggcaggatactgggcctgtgtctgctgcagaacgagctgtgc
cccatcaccctgaacagacacgtcatcaaagtgctgctgggcaggaaggtgaactggcat
gactttgccttcttcgacccggtgatgtacgagagcctgcgtcagctgatccgtcactcg
caggccggcgaggcggaggccgtctttgccgccatggacctggcgttcgccatcgacctc
tgcaaggaggaaggggcggggcaggtggagctgctggctggtggggtgaacatgcctgtg
acccctcttaacgtttatgaatacgtgaggaagtacgccgaacacagaatgctggttgtt
gccgagcaacctcttcatgcaatgaggaagggtctgctggatgtgcttcccaagaactcc
ctggaggacctgacagccgaggacttcaggctgctggtcaatggctgtggagaggtcaat
gtgcagatgctcatcagcttcacgtccttcaatgacgaatctggggagaatgcagacaag
ctgctgcagttcaagcgttggttctggtccatcgtggagaagatgagcatgacagagagg
caagatctggtgtacttctggacctccagcccgtctctgccggccagtgaggagggcttc
cagcccatgccctccatcaccatccggcccccggacgaccagcacctgcccaccgccaac
acctgcatctcgcgcctttacgtgcctctctactcctccaaacagatcctgaaacagaaa
ctcttgctagccattaagaccaagaactttggttttgtttag
DBGET
integrated database retrieval system
