KEGG   Osmerus eperlanus (European smelt): 134023275
Entry
134023275         CDS       T10927                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134023275 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oep03400]
    134023275 (xrcc1)
DNA repair and recombination proteins [BR:oep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     134023275 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 134023275
NCBI-ProteinID: XP_062321235
LinkDB
Position
7:16704290..16711292
AA seq 642 aa
MPEIKLKHVVSCSSEDNTHKAENLLSSDTYRKWKAAKAGETQTSVILQLEKEEQLHSIDI
GNEGSAFIEVLVGRSTSVKDQDFEVLLVTSSFMSPSESKNGTNTNRVRFFGPNQLQKTAA
QENWDRVKIVCSQPYNKSIAYGVAFIKFHSPPDKGEAATKTPPKLTKLGQFRVKDEPSSA
GPSLQPGSLFFNRENASKTSPTLKVSPQNVKLSYASAALQSGGGSGSPLLSAQPLSSPSP
TQAPVKRKFEFSKERQSAPAISLSKKASPLNSPEESPASLKPKARPSTASSHRPSTAKEE
TPDKKRDNLKPETKPKPAKDKAQDLKQVPFNRIMEGVVFVLSGFQNPFRAELRDKALAMG
AKYRPDWTADASHLICAFANTPKYSQVKSAGGMIVQKEWVLDCHKKKQKIPYKRYLMDGS
ESSSEDEVEEDEEKEKEKERKTPQKQERQVTPKKPQIKDEDMFGSSTDADEPEDMDESGM
DTEDELKRVESVRRQKKVEERKKGEERKKGEERKKGEERKKDVKDEDLYGGSTDENTDAE
AEENKPIPELPDFLTGKRFFLYGTFPNNVRRLLLRYIIAFNGAVEDYMSDKVQFVVTSSG
WHNSFEDALMENGNLSFVKPAWIFSINDRQKLLPYQPFTVVP
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcccgagatcaaacttaagcacgttgtgtcttgcagcagtgaagacaacacacacaaa
gctgagaacctgctgagctctgacacctacaggaaatggaaagcagcaaaggctggggag
acgcagacttcggtcattctacagttggagaaggaggagcagttgcacagcatagacata
ggaaatgaagggtctgctttcattgaagtgctggtgggacgctcaacctcagtcaaagac
caggactttgaggttctgctggttacatcctcctttatgtccccatcggagagcaagaac
ggcaccaacaccaacagggtgcgtttttttggacccaatcagttacagaagactgctgct
caggaaaactgggatcgtgtgaagattgtatgcagccagccatacaacaagagcattgcg
tacggggtggcctttattaagttccattcaccgccagacaaaggggaagcagcgaccaaa
acgcccccgaagttaaccaagctgggccagttcagagtaaaagatgagccctcctcggca
ggccccagtctccagcctggcagcttattcttcaacagggagaacgcatccaaaaccagc
ccaacactcaaggtctctcctcagaatgtaaagttgagctatgcatctgcagcgctgcag
tcaggtggtgggtcaggctctcctcttctctcagcccagcccttgtccagtccgtcccct
acacaggcaccagtgaagagaaagtttgaattcagtaaagagcgccagtctgcccctgcc
atttctctctctaagaaagccagtcccctgaactctcctgaggagagccctgcctccctc
aaacccaaagccaggcccagcacagctagcagccacaggcccagcacagccaaagaggag
acccctgacaaaaaaagggacaacttgaaaccagagacaaagcccaagcctgctaaagac
aaggcccaggacttaaagcaggtccccttcaaccgtatcatggagggggtggtgtttgta
ctgagcggcttccagaatcctttcagagcggagctgagggacaaggccctggccatgggg
gctaagtatcgacctgactggacagcagacgcctcacacctcatctgtgcctttgccaac
acccctaagtacagccaagtgaagtcagcagggggcatgattgtgcagaaggagtgggtg
cttgactgccacaagaagaaacagaaaatcccttataaacggtatttgatggacggttcg
gaatccagctcagaggatgaagtagaggaggatgaagagaaagagaaggaaaaagagaga
aagactccacaaaagcaggagagacaagtcactcctaaaaagccgcagataaaggatgaa
gacatgttcggcagctccacagatgctgatgaaccagaagacatggacgagtctggcatg
gacacagaggatgagctaaagagggtggagagtgtgaggaggcagaaaaaagtagaggag
aggaagaaaggcgaggagaggaagaaaggcgaggagaggaagaaaggcgaggagaggaag
aaagacgtgaaggatgaagacttgtatggggggtcaacagacgaaaataccgatgctgag
gcggaggagaacaagcccatcccagagctgcctgacttcctgactggcaagagattcttc
ttgtatggcacattcccaaacaacgtgagacgcttactactgcggtatatcatagcgttt
aatggggcggtggaagactacatgagtgacaaggtccagtttgtggtcaccagctcagga
tggcacaactcctttgaagatgcgctgatggaaaatggaaatctgagttttgtcaagcct
gcttggatattttccatcaatgatcgtcagaagttgttgccctatcagccctttactgtt
gtcccatga

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