Osmerus eperlanus (European smelt): 134023328
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Entry
134023328 CDS
T10927
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134023328
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oep03310
]
134023328
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134023328
Nuclear receptors [BR:
oep03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
134023328
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134023328
NCBI-ProteinID:
XP_062321335
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Position
7:complement(17223663..17230708)
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AA seq
443 aa
AA seq
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MFDYIDFFAVGPGEILDFYTASSCMFQERSLSACFTELTEADWQVRRSAQSAVETQSSSS
EDLFVNPQSPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNIAFTCHREK
NCIINKITRNRCQYCRLQRCFAVGMSKESVRNDRSKRKETVKMTVIETYELTAELGLIVE
KICRAHRDTFPSLCQLGKYTTNSSSDHRIQLDLGLWDKFSELATKCIIKVVEFAKRVPGF
TGLTIADQITLLKAACLDILILRICTRYTPGQDTMTFSDGLTLTRNQIHNAGFGPLTDLV
FTFAGQLLPLEMDDTESGLLSAICLVSGDRQCLEEPSKVEVLQEPLLEALKIYSRKRRPS
MPLMFPKALMKITDLRTISTKGAERVVTLKMEIPGALPPLIQEMLEDLDNLEKSEAEGKR
AEQNGGPHTVTISAHYIDSGLFA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacatagatttttttgcagttggacctggagaaattctggatttttatacc
gcaagttcttgtatgttccaggagcgatcgctttcggcatgcttcactgaactaactgag
gcggattggcaagtgcgccggagcgcccaatcagctgtagaaacccagagctccagctct
gaagacctgtttgtcaatcctcagtctcccctgccacctcctcgcacctacaagccctgc
tttgtctgccaggataagtcctctggttaccactatggcgtcagtgcctgtgaaggctgc
aagggtttcttccgtagaagtgtccagaagaacatagcctttacgtgccacagagaaaaa
aactgcattatcaataaaatcacccggaatcgttgccagtactgtcgactacaaaggtgc
tttgcagtgggaatgtccaaggagtctgtgaggaacgacaggagcaaaaggaaggagact
gttaagatgactgtcatagagacctatgagctgacggcagagctgggcctcatagtggaa
aagatctgcagggcccacagagatacattcccatctctctgtcagttgggcaaatacact
acaaattcgagctcagaccacaggatacagttggatttgggtctgtgggataagttcagt
gagctggccaccaaatgtataatcaaagtggtggagtttgccaaacgtgtacctgggttt
accggcctgaccattgctgaccagatcacgctcctcaaagctgcttgtctggatattctg
attttgaggatctgtaccagatacactcctggccaggacaccatgactttctctgatggc
ctgacacttacccgcaaccagatccacaatgctggctttgggcccctcactgacttggtg
ttcacctttgccggccagctcttgccactggaaatggatgacacagagagcggccttctt
agcgccatctgtctggtgtctggagaccggcagtgcttggaggaaccatctaaggtggag
gttctccaggagccactattagaggccctgaagatctactcccgtaagcgtcgtcccagt
atgcccctcatgttccccaaggccctcatgaagatcactgacctccggaccatcagcacc
aaaggagctgagcgtgtggtcactctgaagatggagatcccgggtgccttgcctcctctt
atccaggagatgcttgaggacctggataacctggagaagtcagaggcggaggggaagaga
gcagagcagaatggcgggccacacacagtcactatttctgcgcactacatcgactctggc
ctctttgcctga
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