Osmerus eperlanus (European smelt): 134023329
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Entry
134023329 CDS
T10927
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134023329 (ccdc174)
03041 Spliceosome [BR:
oep03041
]
134023329 (ccdc174)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134023329 (ccdc174)
Spliceosome [BR:
oep03041
]
Complex C
Other components
EJC/TREX
134023329 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
134023329
NCBI-ProteinID:
XP_062321339
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All DBs
Position
1:complement(17692277..17696917)
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AA seq
677 aa
AA seq
DB search
MDKKKKLYDVTASSLVDLKAELYRKQEKFKHQKLGQDAGAGSSNFKIKKPTVWNKQNEGV
SARAQKDVEQLTEEENNLDKSRRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDK
KRETHAQQDREIEDRDMGSSSPIPPPENPEEEWVDYVDALGRSRKCMKKDLPGFKKMDQD
FQGKRHAVTEKTLLSEDMRRELQRQEWEREEEEALKRPVGPIHYEDIREQEARELGVGYF
AFSQDQEQRRKQRDTLDMLRDQTTDQRSKREMLKEKRKALLKARLAKVRQRKNKNTKMDG
TEEDQEEPLKEEEDDEIGPLPPSEHAPEASGKVGKVEVEIQERKDTRPGVPHVREWDRGK
EFSLGLWTNRRREERDADFAPPSAYFKEDRKPSYGRTVGREQDKPKMTFKWSDAQSEKSK
EPPKPHPEPQAHPEPQAHPEPQAHPEPLAHPEPLAHPEPQAHPQPNSAAGHSKPQHTSPP
PLIKMQIQPQTTDQDQPQPVPSAPAVPSAPQLQYTAPPMHCPPTAPPLFSQCSLPPLHPN
CPPSHLQYTSTPHYPPQYPPHYPPQYPPSQYPYGQYPPSQYPYGQYPYGQYPPSQYPPSQ
YPPSQYPPSQYPPSQYPPQYLAQPLVQQQAQPLVQQQAQPLVQQQAQPHQPMQEAQSQPL
ETSQSLEDMLSFYKSST
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaagctatacgatgttacggcctcttctttggtggacctcaaagct
gaactctacagaaagcaggagaaattcaaacatcagaagctaggacaagatgctggagct
ggctcttctaatttcaaaattaagaagcccacagtgtggaataagcagaatgagggggtc
tctgcacgagcacagaaagatgtggagcagctgacagaggaggaaaacaaccttgataag
tcgagacggaagctggaggagaaggccaaactctatgagcagatgaccaaaggagacttt
cctgatgaggagacagagggtttgttcctggtggatttcactcagaagatcattgacaag
aagagagagactcatgcccagcaagacagggagatcgaggacagggatatgggcagctcg
tccccaatcccaccccccgagaacccggaagaggagtgggtggattatgtggatgctctg
ggcagatcaaggaagtgcatgaagaaagacctgccagggttcaagaaaatggaccaagac
tttcaagggaaaagacatgcagtaacggagaagaccttgctgtcagaggacatgcgtcgt
gagcttcagagacaagagtgggagagggaggaagaggaggcgttgaagaggcctgtggga
ccaatccactatgaggacattagggagcaagaggcccgtgagttgggtgtgggctacttt
gcgttctctcaggaccaggagcagcgcaggaaacagagagacaccctggacatgctcaga
gaccagacgacagaccagcgtagtaagagagagatgctgaaggagaagagaaaggctcta
cttaaggctcgactggctaaggtgaggcagagaaagaacaaaaataccaagatggatggc
acagaggaggatcaggaagagccactgaaagaagaagaagacgatgagattggtcccctg
cctccatcagagcatgcccctgaggccagtgggaaggttgggaaggtggaggtggagatc
caggagagaaaggacaccaggccaggggttccccacgtcagagagtgggacaggggcaaa
gaattctctctgggcctgtggactaaccggagacgagaagaacgtgatgcagactttgcc
cctccctctgcgtattttaaagaggataggaaaccaagttatggaagaactgttggacga
gaacaggacaaacccaaaatgactttcaagtggtctgatgcacaaagtgaaaagagcaag
gagccacccaagcctcatcctgaaccccaggcccaccctgaaccccaggcccaccctgaa
ccccaggcccaccctgaacccctggcccaccctgaacccctggcccaccctgaaccccaa
gcccatccgcagcctaatagtgctgctggccactctaaaccccaacacacatctcctccc
cctctgattaaaatgcagatacaaccccaaaccacagatcaagaccaacctcagcccgta
ccctctgcacctgctgtgccgagcgccccccaacttcagtacacagcaccgccaatgcac
tgtcctccgactgccccaccccttttctcccagtgttctcttccaccattgcatcctaac
tgtcctccatctcacctgcagtatacatccacaccccactacccaccccagtatcccccc
cactacccaccccaatatccccctagccaatatccatatggccagtatccccctagccag
tatccctatggccagtatccctatggccagtatccccctagccagtatccccctagccag
tatccacctagccagtatccccctagccagtatccacctagccagtatcccccccagtat
ctggcccaacccctggtccagcaacaggcccaacccctggtccagcaacaggcccaaccc
ctggtccagcaacaggcccagcctcatcagcccatgcaggaagctcagtcccagcccctg
gaaacctcccagagtctggaggacatgctgtccttttacaagagctctacttga
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